FFCP PHASE1:Mm9::chrX:137908396..137908401,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:137908396..137908401,-
|short_description=p4@Col4a6
|description=CAGE_peak_4_at_Col4a6_5end
|association_with_transcript=115bp_to_ENSMUST00000033629_5end
...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=94216 | |EntrezGene=94216 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=E9Q511 | |UniProt=E9Q511 | ||
|association_with_transcript=115bp_to_ENSMUST00000033629_5end | |||
|cluster_id=chrX:137908396..137908401,- | |||
|description=CAGE_peak_4_at_Col4a6_5end | |||
|id=chrX:137908396..137908401,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.59e-18,2;CL:0002604,1.59e-18,2;CL:0002453,1.50e-10,8;CL:0000333,1.47e-08,10;CL:0000095,1.47e-08,10;CL:0000243,1.47e-08,10;CL:0000123,1.47e-08,10;CL:0000125,1.47e-08,10;CL:0000030,1.47e-08,10;CL:0000339,1.47e-08,10;CL:0000128,8.54e-07,6;CL:0000126,8.54e-07,6;CL:0000127,8.54e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005153!1.42e-09!17;UBERON:0005156!3.11e-08!26;UBERON:0000990!3.11e-08!26;UBERON:0002048!2.75e-07!14;UBERON:0000117!2.75e-07!14;UBERON:0000171!2.75e-07!14;UBERON:0000170!2.75e-07!14;UBERON:0005597!2.75e-07!14;UBERON:0000118!2.75e-07!14;UBERON:0003133!4.97e-07!24;UBERON:0000464!6.74e-07!57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001255,2.01e-10,1;UBERON:0001556,2.01e-10,1;UBERON:0000998,4.59e-10,1;UBERON:0007194,4.59e-10,1;UBERON:0006868,4.59e-10,1;UBERON:0000080,6.26e-10,4;UBERON:0005904,6.26e-10,4;UBERON:0006947,6.26e-10,4;UBERON:0002120,6.26e-10,4;UBERON:0004054,6.26e-10,4;UBERON:0004875,6.26e-10,4;UBERON:0004876,6.26e-10,4;UBERON:0005721,6.26e-10,4;UBERON:0005754,6.26e-10,4;UBERON:0007297,6.26e-10,4;UBERON:0004122,2.90e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.183546752161682,0,0.65407546914134,1.5378032791413,1.1665793944457,0.139986421625363,0,0,0,0,0.771778308107841,0,0.515672092277442,0.202316460859598,0,0,0,0,0,0,0,0.599200221036809,1.53687322128622,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0.372798891650601,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,1.59059292611903,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0.162241263067758,2.03678727700633,0.373220911830279,0.505445516867349,0.210441855886474,0,0.229902104433473,0.360124259610698,0.452114453507145,0.408218994907967,0.512454881139399,0.0937017245597288,0.776110112217047,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0.234526059981096,0.540186184383045,0,0,0.308534225774757,0.465067889500816,0,0,0.16455984991348,0.32833492815819,0.243206428637567,0,0,0.134206418760372,0,0.205809224758569,0,0,0,0.232236671860439,0.128867461322093,0.403367049246685,0.22237804384487,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0.0701358198903186,0.252946148497029,0.295220295959204,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.189491411770485,0,0.339490171550376,0.469380496577004,0.837531287209079,0.952174563544055,0.390267295715598,0,0.44292937929755,0.478364305972461,0.327726629431476,0.863424909329478,0.723245292907558,0,0,0.983528546038072,1.10374698521893,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.35613120733451,0.81443479676788,0.659880491890142,0,0,0,0,0.295301892880773,0,0,0.727067458955011,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0,0,0.42366414172764,0.441056796109924,0.16488625294148,0.161464426695906,0.120625849856312,0.477489376012546,0.164140899745061,0.291480836629851,0,0,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0.203319467126849,0.756037385752609,0.836353184057875,0.655087691238533,1.07891477107857,1.1571483801547,0.785267825952089,0.129614973291793,0.621339313086926,0,0,0.165458490457098,0,0.387479470433193,0.506868376472335,0.234714477291508,0.39061315453185,0.314578033277133,0.241584120826006,0,0,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0,0,0,1.73870634628971,0.187682475451182,0.549454872801795,0.214368379079066,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0.222246727801615,0,0,0.505394423527595,0,0,0.187283014939765,0,0.17230640686684,0,0,0,0,0,0,0.177475806159338,0,0,0.188218760830661,0.0846146078916765,0,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.183546752161682,0,0.65407546914134,1.5378032791413,1.1665793944457,0.139986421625363,0,0,0,0,0.771778308107841,0,0.515672092277442,0.202316460859598,0,0,0,0,0,0,0,0.599200221036809,1.53687322128622,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0.372798891650601,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,1.59059292611903,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0.162241263067758,2.03678727700633,0.373220911830279,0.505445516867349,0.210441855886474,0,0.229902104433473,0.360124259610698,0.452114453507145,0.408218994907967,0.512454881139399,0.0937017245597288,0.776110112217047,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0.234526059981096,0.540186184383045,0,0,0.308534225774757,0.465067889500816,0,0,0.16455984991348,0.32833492815819,0.243206428637567,0,0,0.134206418760372,0,0.205809224758569,0,0,0,0.232236671860439,0.128867461322093,0.403367049246685,0.22237804384487,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0.0701358198903186,0.252946148497029,0.295220295959204,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.189491411770485,0,0.339490171550376,0.469380496577004,0.837531287209079,0.952174563544055,0.390267295715598,0,0.44292937929755,0.478364305972461,0.327726629431476,0.863424909329478,0.723245292907558,0,0,0.983528546038072,1.10374698521893,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.35613120733451,0.81443479676788,0.659880491890142,0,0,0,0,0.295301892880773,0,0,0.727067458955011,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0,0,0.42366414172764,0.441056796109924,0.16488625294148,0.161464426695906,0.120625849856312,0.477489376012546,0.164140899745061,0.291480836629851,0,0,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0.203319467126849,0.756037385752609,0.836353184057875,0.655087691238533,1.07891477107857,1.1571483801547,0.785267825952089,0.129614973291793,0.621339313086926,0,0,0.165458490457098,0,0.387479470433193,0.506868376472335,0.234714477291508,0.39061315453185,0.314578033277133,0.241584120826006,0,0,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0,0,0,1.73870634628971,0.187682475451182,0.549454872801795,0.214368379079066,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0.222246727801615,0,0,0.505394423527595,0,0,0.187283014939765,0,0.17230640686684,0,0,0,0,0,0,0.177475806159338,0,0,0.188218760830661,0.0846146078916765,0,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p4@Col4a6 | |||
}} | }} |
Latest revision as of 15:46, 1 October 2015
Short description: | p4@Col4a6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Col4a6_5end |
Coexpression cluster: | NA |
Association with transcript: | 115bp_to_ENSMUST00000033629_5end |
EntrezGene: | Col4a6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.59e-18 | 2 |
astrocyte of the hippocampus | 1.59e-18 | 2 |
oligodendrocyte precursor cell | 1.50e-10 | 8 |
migratory neural crest cell | 1.47e-08 | 10 |
neuron associated cell | 1.47e-08 | 10 |
glial cell (sensu Vertebrata) | 1.47e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 1.47e-08 | 10 |
glial cell | 1.47e-08 | 10 |
glioblast | 1.47e-08 | 10 |
glioblast (sensu Vertebrata) | 1.47e-08 | 10 |
oligodendrocyte | 8.54e-07 | 6 |
macroglial cell | 8.54e-07 | 6 |
astrocyte | 8.54e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
urinary bladder | 2.01e-10 | 1 |
lower urinary tract | 2.01e-10 | 1 |
seminal vesicle | 4.59e-10 | 1 |
vesicular gland | 4.59e-10 | 1 |
seminal fluid secreting gland | 4.59e-10 | 1 |
mesonephros | 6.26e-10 | 4 |
duct of male reproductive system | 6.26e-10 | 4 |
male genital duct | 6.26e-10 | 4 |
pronephros | 6.26e-10 | 4 |
internal male genitalia | 6.26e-10 | 4 |
nephrogenic cord | 6.26e-10 | 4 |
urogenital ridge | 6.26e-10 | 4 |
pronephric mesoderm | 6.26e-10 | 4 |
rostral part of nephrogenic cord | 6.26e-10 | 4 |
presumptive pronephric mesoderm | 6.26e-10 | 4 |
genitourinary system | 2.90e-08 | 5 |