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FFCP PHASE1:Mm9::chr9:75459085..75459102,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr9:75459085..75459102,-
|DHSsupport=NA
|short_description=p4@Tmod2
|DPIdataset=NA
|description=CAGE_peak_4_at_Tmod2_5end
|association_with_transcript=29bp_to_ENSMUST00000064433,NM_016711,uc009qsl.1,uc009qsm.1,uc009qsn.1,uc009qso.1_5end
|EntrezGene=50876
|EntrezGene=50876
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=Q9JKK7
|UniProt=Q9JKK7
|association_with_transcript=29bp_to_ENSMUST00000064433,NM_016711,uc009qsl.1,uc009qsm.1,uc009qsn.1,uc009qso.1_5end
|cluster_id=chr9:75459085..75459102,-
|description=CAGE_peak_4_at_Tmod2_5end
|id=chr9:75459085..75459102,-
|ontology_enrichment_celltype=CL:0000117!1.02e-13!23;CL:0000337!1.02e-13!23;CL:0000540!6.30e-09!33;CL:0000047!6.30e-09!33;CL:0000031!6.30e-09!33;CL:0000404!6.30e-09!33;CL:0002319!8.90e-08!43;CL:0000221!1.03e-07!44;CL:0000133!1.03e-07!44
|ontology_enrichment_celltype_v019_2=CL:0000117,9.11e-23,23;CL:0000337,9.11e-23,23;CL:0000540,1.03e-13,33;CL:0000047,1.03e-13,33;CL:0000031,1.03e-13,33;CL:0000404,1.03e-13,33;CL:0000393,1.42e-10,39;CL:0000211,1.42e-10,39;CL:0002319,5.38e-09,43;CL:0000221,1.19e-08,44;CL:0000133,1.19e-08,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!8.53e-26!71;UBERON:0003075!8.53e-26!71;UBERON:0007284!8.53e-26!71;UBERON:0001049!1.60e-24!52;UBERON:0005068!1.60e-24!52;UBERON:0006241!1.60e-24!52;UBERON:0007135!1.60e-24!52;UBERON:0000073!2.43e-23!75;UBERON:0001016!2.43e-23!75;UBERON:0000955!3.01e-23!50;UBERON:0006238!3.01e-23!50;UBERON:0001017!4.78e-23!73;UBERON:0005743!4.78e-23!73;UBERON:0000033!5.08e-23!63;UBERON:0002616!1.43e-22!49;UBERON:0002020!3.23e-22!34;UBERON:0004121!3.71e-22!102;UBERON:0000924!3.71e-22!102;UBERON:0006601!3.71e-22!102;UBERON:0003056!6.82e-21!49;UBERON:0003080!1.05e-19!40;UBERON:0002780!4.91e-19!39;UBERON:0001890!4.91e-19!39;UBERON:0006240!4.91e-19!39;UBERON:0002791!4.92e-19!29;UBERON:0003528!4.92e-19!29;UBERON:0001893!4.92e-19!29;UBERON:0000956!5.88e-14!21;UBERON:0001869!5.88e-14!21;UBERON:0000203!5.88e-14!21;UBERON:0000153!3.20e-13!94;UBERON:0007811!3.46e-13!86;UBERON:0002619!7.51e-12!17;UBERON:0002021!3.65e-09!10;UBERON:0000411!3.65e-09!10;UBERON:0001950!3.65e-09!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.08e-39,54;UBERON:0001049,1.38e-36,52;UBERON:0005068,1.38e-36,52;UBERON:0006241,1.38e-36,52;UBERON:0007135,1.38e-36,52;UBERON:0002020,3.73e-34,34;UBERON:0001017,5.23e-33,73;UBERON:0001016,1.03e-31,75;UBERON:0000955,6.30e-31,47;UBERON:0006238,6.30e-31,47;UBERON:0002346,7.82e-30,64;UBERON:0003075,7.82e-30,64;UBERON:0007284,7.82e-30,64;UBERON:0002616,8.28e-30,46;UBERON:0003528,1.26e-28,29;UBERON:0002791,1.26e-28,29;UBERON:0001893,1.26e-28,29;UBERON:0003080,4.50e-27,40;UBERON:0002780,5.85e-26,39;UBERON:0001890,5.85e-26,39;UBERON:0006240,5.85e-26,39;UBERON:0010371,2.01e-24,73;UBERON:0004121,6.98e-24,95;UBERON:0000924,6.98e-24,95;UBERON:0006601,6.98e-24,95;UBERON:0003056,9.96e-23,49;UBERON:0000956,7.52e-20,21;UBERON:0001869,7.52e-20,21;UBERON:0000203,7.52e-20,21;UBERON:0010314,1.47e-16,92;UBERON:0002619,3.58e-16,17;UBERON:0002021,8.15e-15,10;UBERON:0000411,8.15e-15,10;UBERON:0001950,8.15e-15,10;UBERON:0002420,8.50e-10,8;UBERON:0007245,8.50e-10,8;UBERON:0010009,8.50e-10,8;UBERON:0010011,8.50e-10,8;UBERON:0000454,8.50e-10,8;UBERON:0000025,1.32e-09,114;UBERON:0003076,1.43e-09,12;UBERON:0003057,1.43e-09,12;UBERON:0004111,3.29e-08,122;UBERON:0002240,1.12e-07,6;UBERON:0005174,1.12e-07,6;UBERON:0001137,1.12e-07,6;UBERON:0000369,9.72e-07,5;UBERON:0002435,9.72e-07,5;UBERON:0000204,9.72e-07,5;UBERON:0010082,9.72e-07,5
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659058548203415,0.777719596297134,0.279972843250725,0,0,0,0,0,0,0,3.03474691289397,2.11596391708813,3.1691570175309,0,0,0,0,0,0.599200221036809,0,2.28117147078651,2.16009501330705,1.89292465216244,4.85606673486466,4.19650227808066,1.46988959057945,1.62937300731002,1.83843757322004,5.50579404996943,6.38436690425939,4.91540906419979,4.48413378282659,4.39140689291566,3.12548022334056,4.4669279840221,5.6276261003168,5.04234217663473,9.72274332063103,5.26775218956681,2.98239113320481,0.227178579999552,0.604572480854284,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0.517875767294343,0.148442139064825,0.520455980298408,0.608930956624282,0.230615497256059,0.301445281105245,0.352766121407114,0.502666365318702,0,0.433798070759735,0.884610551949874,0.647067399789637,0.441683036920787,0.484875253135222,0,7.61230072230023,5.65506108396329,0,0,0,0,5.39246301857362,13.7250180845588,10.8062742817063,12.3415267336516,16.8772201838018,4.77912502486988,12.3303359931496,0.712875546952214,0,0,0.210441855886474,0.130120442962704,0.459804208866946,0.720248519221397,1.05493372485001,0.476255494059295,0.640568601424249,0.374806898238915,1.55222022443409,0.215567992932842,0,0.527853372491847,0.219195732427575,0,0.348252166522167,0.411564272815887,0,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0,0.268273401399619,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0,0.134206418760372,12.4071069652835,7.40913209130848,0,0,0.426576501070468,0,0.128867461322093,0,0.22237804384487,0.380451252225118,0.474529061544512,0.164698954724011,0,0,0,0,0.216138049874694,0.199141273254367,0,0.228497025219458,0,0,0,0.140271639780637,0,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0,0,0.554259570499814,0,0.162964976442026,0,0.234690248288502,0,0,0,0.157635144106191,0.221464689648775,0,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0,0,4.81651769963376,6.09500770279457,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0.395287777946524,5.14114106274891,0,0.712262414669021,0.162886959353576,0,0,0.242780636154981,0,0,0,0.614870295887855,0,0,0,0.632073515871632,0,0,4.42571487479924,0.36012218806262,0.129358683782755,0,0,0.356737635204141,1.15184314421485,0.913394847343798,0,0,0.220528398054962,0.16488625294148,0.322928853391811,0.241251699712623,0,0,0,7.04616147639937,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0.165306911450672,0.26175594198403,0,0,0,0.149516546043979,0,0,0,0,0.117357238645754,0.2604087696879,0.524296722128554,0,0,0,0,0.308132871494482,0.129920822977795,0.179026695667481,0,0,0.295379054349154,0.100966449948148,0,0,0,0.0962118416403295,0.233753804363138,0,0,0,0,0,0,0.36630324853453,0,0,22.5900737046827,27.1591889539234,24.0616115644547,28.0120687220211,16.4419804744954,18.1294535373528,20.2506750069542,17.5625269257446,19.4851235863208,19.6748918465692,0.103787347584177,0.798049746802062,0.170733605754134,0.972426868273176,0.209613162627982,2.38996560985018,1.55572709461131,1.64828045791115,1.28367683836726,1.26348605881899,0.760437899670719,1.13175804831646,1.591905626988,1.72867911493147,1.66562859971278,2.38146845641537,1.62238056322798,2.31491064556446,1.64834360321323,2.06078488188156,0.342869252385415,1.24233064311536,0.953744759789284,1.45346416632329,2.63506265162926,1.35383372626682,1.82927972872773,0.789209134313529,1.49384525230448,1.68342681497322,2.13543032623513,1.28055827088233,0.818462086339379,1.08455788830176,0.964533054905707,2.49810577937946,1.63752125911786,0.859484216193193,0.765153328275374,0.220591419119515,0.463735671240843
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659058548203415,0.777719596297134,0.279972843250725,0,0,0,0,0,0,0,3.03474691289397,2.11596391708813,3.1691570175309,0,0,0,0,0,0.599200221036809,0,2.28117147078651,2.16009501330705,1.89292465216244,4.85606673486466,4.19650227808066,1.46988959057945,1.62937300731002,1.83843757322004,5.50579404996943,6.38436690425939,4.91540906419979,4.48413378282659,4.39140689291566,3.12548022334056,4.4669279840221,5.6276261003168,5.04234217663473,9.72274332063103,5.26775218956681,2.98239113320481,0.227178579999552,0.604572480854284,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0.517875767294343,0.148442139064825,0.520455980298408,0.608930956624282,0.230615497256059,0.301445281105245,0.352766121407114,0.502666365318702,0,0.433798070759735,0.884610551949874,0.647067399789637,0.441683036920787,0.484875253135222,0,7.61230072230023,5.65506108396329,0,0,0,0,5.39246301857362,13.7250180845588,10.8062742817063,12.3415267336516,16.8772201838018,4.77912502486988,12.3303359931496,0.712875546952214,0,0,0.210441855886474,0.130120442962704,0.459804208866946,0.720248519221397,1.05493372485001,0.476255494059295,0.640568601424249,0.374806898238915,1.55222022443409,0.215567992932842,0,0.527853372491847,0.219195732427575,0,0.348252166522167,0.411564272815887,0,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0,0.268273401399619,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0,0.134206418760372,12.4071069652835,7.40913209130848,0,0,0.426576501070468,0,0.128867461322093,0,0.22237804384487,0.380451252225118,0.474529061544512,0.164698954724011,0,0,0,0,0.216138049874694,0.199141273254367,0,0.228497025219458,0,0,0,0.140271639780637,0,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0,0,0.554259570499814,0,0.162964976442026,0,0.234690248288502,0,0,0,0.157635144106191,0.221464689648775,0,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0,0,4.81651769963376,6.09500770279457,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0.395287777946524,5.14114106274891,0,0.712262414669021,0.162886959353576,0,0,0.242780636154981,0,0,0,0.614870295887855,0,0,0,0.632073515871632,0,0,4.42571487479924,0.36012218806262,0.129358683782755,0,0,0.356737635204141,1.15184314421485,0.913394847343798,0,0,0.220528398054962,0.16488625294148,0.322928853391811,0.241251699712623,0,0,0,7.04616147639937,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0.165306911450672,0.26175594198403,0,0,0,0.149516546043979,0,0,0,0,0.117357238645754,0.2604087696879,0.524296722128554,0,0,0,0,0.308132871494482,0.129920822977795,0.179026695667481,0,0,0.295379054349154,0.100966449948148,0,0,0,0.0962118416403295,0.233753804363138,0,0,0,0,0,0,0.36630324853453,0,0,22.5900737046827,27.1591889539234,24.0616115644547,28.0120687220211,16.4419804744954,18.1294535373528,20.2506750069542,17.5625269257446,19.4851235863208,19.6748918465692,0.103787347584177,0.798049746802062,0.170733605754134,0.972426868273176,0.209613162627982,2.38996560985018,1.55572709461131,1.64828045791115,1.28367683836726,1.26348605881899,0.760437899670719,1.13175804831646,1.591905626988,1.72867911493147,1.66562859971278,2.38146845641537,1.62238056322798,2.31491064556446,1.64834360321323,2.06078488188156,0.342869252385415,1.24233064311536,0.953744759789284,1.45346416632329,2.63506265162926,1.35383372626682,1.82927972872773,0.789209134313529,1.49384525230448,1.68342681497322,2.13543032623513,1.28055827088233,0.818462086339379,1.08455788830176,0.964533054905707,2.49810577937946,1.63752125911786,0.859484216193193,0.765153328275374,0.220591419119515,0.463735671240843
|short_description=p4@Tmod2
}}
}}

Latest revision as of 03:33, 27 September 2015

Short description:p4@Tmod2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Tmod2_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 29bp_to_ENSMUST00000064433, NM_016711, uc009qsl.1, uc009qsm.1, uc009qsn.1, uc009qso.1_5end
EntrezGene:Tmod2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Tmod2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.03
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.28
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.16
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.20
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.47
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.63
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.48
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.39
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.47
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.04
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.72
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.98
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B27.61
cerebellum, neonate N30.CNhs11135.1395-42I25.66
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.39
corpus striatum, adult.CNhs10487.19-21D813.73
corpus striatum, neonate N00.CNhs11226.630-43F110.81
cortex, adult.CNhs10473.12-14D512.34
cortex, neonate N30.CNhs11107.1392-42F216.88
diencephalon, adult.CNhs10482.20-12F24.78
diencephalon, neonate N30.CNhs11201.1388-42B212.33
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E812.41
hippocampus, neonate N00.CNhs11228.627-43G17.41
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.82
medulla oblongata, neonate N30.CNhs11200.1396-42A36.10
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I95.14
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G84.43
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C97.05
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A122.59
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A227.16
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A324.06
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D728.01
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A416.44
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A518.13
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A620.25
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A717.56
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A819.49
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A919.67
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F22.39
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.73
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.14
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)9.11e-2323
neuroblast (sensu Vertebrata)9.11e-2323
neuron1.03e-1333
neuronal stem cell1.03e-1333
neuroblast1.03e-1333
electrically signaling cell1.03e-1333
electrically responsive cell1.42e-1039
electrically active cell1.42e-1039
neural cell5.38e-0943
ectodermal cell1.19e-0844
neurectodermal cell1.19e-0844

Uber anatomy
Ontology termp-valuen
regional part of nervous system6.08e-3954
neural tube1.38e-3652
neural rod1.38e-3652
future spinal cord1.38e-3652
neural keel1.38e-3652
gray matter3.73e-3434
central nervous system5.23e-3373
nervous system1.03e-3175
brain6.30e-3147
future brain6.30e-3147
neurectoderm7.82e-3064
neural plate7.82e-3064
presumptive neural plate7.82e-3064
regional part of brain8.28e-3046
brain grey matter1.26e-2829
regional part of telencephalon1.26e-2829
telencephalon1.26e-2829
anterior neural tube4.50e-2740
regional part of forebrain5.85e-2639
forebrain5.85e-2639
future forebrain5.85e-2639
ecto-epithelium2.01e-2473
ectoderm-derived structure6.98e-2495
ectoderm6.98e-2495
presumptive ectoderm6.98e-2495
pre-chordal neural plate9.96e-2349
cerebral cortex7.52e-2021
cerebral hemisphere7.52e-2021
pallium7.52e-2021
structure with developmental contribution from neural crest1.47e-1692
regional part of cerebral cortex3.58e-1617
occipital lobe8.15e-1510
visual cortex8.15e-1510
neocortex8.15e-1510
basal ganglion8.50e-108
nuclear complex of neuraxis8.50e-108
aggregate regional part of brain8.50e-108
collection of basal ganglia8.50e-108
cerebral subcortex8.50e-108
tube1.32e-09114
posterior neural tube1.43e-0912
chordal neural plate1.43e-0912
anatomical conduit3.29e-08122
spinal cord1.12e-076
dorsal region element1.12e-076
dorsum1.12e-076
corpus striatum9.72e-075
striatum9.72e-075
ventral part of telencephalon9.72e-075
future corpus striatum9.72e-075
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