FFCP PHASE1:Mm9::chr9:7502340..7502345,+: Difference between revisions
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|id=chr9:7502340..7502345,+
|short_description=p1@Mmp10
|description=CAGE_peak_1_at_Mmp10_5end
|association_with_transcript=-6bp_to_ENSMUST00000034488_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=17384 | |EntrezGene=17384 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=140 | |||
|TSSclassifier=NA | |||
|UniProt=O55123 | |UniProt=O55123 | ||
|association_with_transcript=-6bp_to_ENSMUST00000034488_5end | |||
|cluster_id=chr9:7502340..7502345,+ | |||
|description=CAGE_peak_1_at_Mmp10_5end | |||
|id=chr9:7502340..7502345,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,4.04e-14,3;CL:0002202,4.04e-14,3;CL:0000069,4.04e-14,3;CL:0002632,4.04e-14,3;CL:0002368,4.04e-14,3;CL:0000307,4.04e-14,3;CL:0000377,4.04e-14,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!2.45e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.06e-22,31;UBERON:0005409,2.93e-14,47;UBERON:0003126,4.04e-14,3;UBERON:0001005,4.04e-14,3;UBERON:0007196,4.04e-14,3;UBERON:0001558,4.04e-14,3;UBERON:0004119,1.96e-08,118;UBERON:0000925,1.96e-08,118;UBERON:0006595,1.96e-08,118;UBERON:0004921,1.25e-07,114;UBERON:0001007,1.88e-07,116;UBERON:0001555,1.88e-07,116;UBERON:0007026,1.88e-07,116 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0,0,0,1.33016393619462,0.252030129759931,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.709638518536602,0.917733760808408,0,0,0.219686182734472,0,0,0,0,0,0,0.771778308107841,0,0,0,0,0,0,0,0.899899717281399,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.908714319998209,0.453429360640713,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,6.49473123033642,7.85415582972806,4.04419556011827,2.05530983494308,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0.323533699894818,0.662524555381181,0,0,0,0,18.13745091981,0,0,0,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,5.02456076660734,0,0,0,0.201683524623343,1.33426826306922,0.570676878337677,24.2009821387701,2.47048432086016,6.78605063760728,3.38226002469956,7.79856348476481,8.08937467788799,18.371734239349,21.3081162382173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0.390438744296638,0.215423397732799,0.955875191810208,0.668396022247182,0.283076530788832,0.404810701674894,0.292255857911312,0,0,0.567760340833074,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,3.60114520468494,0,0,0.161464426695906,0.120625849856312,0.119372344003136,0,15.4484843413821,0,0,0,0,0,0,0,0.509935289981566,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0.134864346384821,0.165306911450672,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0.201932899896295,0,0,0.0974578807397524,0,0,0,0,0,0.167884616364078,0,4.87974436173073,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.0640251524048693,0,0,0,0,0.412085900803307,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0.197008964751127,0,0,0.192906610981141,0,0.467863216890817,0.214871054048298,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0,0,0,1.33016393619462,0.252030129759931,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.709638518536602,0.917733760808408,0,0,0.219686182734472,0,0,0,0,0,0,0.771778308107841,0,0,0,0,0,0,0,0.899899717281399,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.908714319998209,0.453429360640713,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,6.49473123033642,7.85415582972806,4.04419556011827,2.05530983494308,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0.323533699894818,0.662524555381181,0,0,0,0,18.13745091981,0,0,0,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,5.02456076660734,0,0,0,0.201683524623343,1.33426826306922,0.570676878337677,24.2009821387701,2.47048432086016,6.78605063760728,3.38226002469956,7.79856348476481,8.08937467788799,18.371734239349,21.3081162382173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0.390438744296638,0.215423397732799,0.955875191810208,0.668396022247182,0.283076530788832,0.404810701674894,0.292255857911312,0,0,0.567760340833074,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,3.60114520468494,0,0,0.161464426695906,0.120625849856312,0.119372344003136,0,15.4484843413821,0,0,0,0,0,0,0,0.509935289981566,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0.134864346384821,0.165306911450672,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0.201932899896295,0,0,0.0974578807397524,0,0,0,0,0,0.167884616364078,0,4.87974436173073,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.0640251524048693,0,0,0,0,0.412085900803307,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0.197008964751127,0,0,0.192906610981141,0,0.467863216890817,0.214871054048298,0,0,0.231867835620421 | ||
|short_description=p1@Mmp10 | |||
}} | }} |
Latest revision as of 03:21, 27 September 2015
Short description: | p1@Mmp10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mmp10_5end |
Coexpression cluster: | MCL_coexpression_mm9:140 |
Association with transcript: | -6bp_to_ENSMUST00000034488_5end |
EntrezGene: | Mmp10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 4.04e-14 | 3 |
epithelial cell of tracheobronchial tree | 4.04e-14 | 3 |
branched duct epithelial cell | 4.04e-14 | 3 |
epithelial cell of lower respiratory tract | 4.04e-14 | 3 |
respiratory epithelial cell | 4.04e-14 | 3 |
tracheal epithelial cell | 4.04e-14 | 3 |
tracheoblast | 4.04e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.06e-22 | 31 |
gastrointestinal system | 2.93e-14 | 47 |
trachea | 4.04e-14 | 3 |
respiratory airway | 4.04e-14 | 3 |
tracheobronchial tree | 4.04e-14 | 3 |
lower respiratory tract | 4.04e-14 | 3 |
endoderm-derived structure | 1.96e-08 | 118 |
endoderm | 1.96e-08 | 118 |
presumptive endoderm | 1.96e-08 | 118 |
subdivision of digestive tract | 1.25e-07 | 114 |
digestive system | 1.88e-07 | 116 |
digestive tract | 1.88e-07 | 116 |
primitive gut | 1.88e-07 | 116 |