FFCP PHASE1:Mm9::chr9:64659258..64659283,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:64659258..64659283,+
|short_description=p1@Dennd4a
|description=CAGE_peak_1_at_Dennd4a_5end
|association_with_transcript=19bp_to_ENSMUST00000098640_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=102442 | |EntrezGene=102442 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=374 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q8W3 | |UniProt=E9Q8W3 | ||
|association_with_transcript=19bp_to_ENSMUST00000098640_5end | |||
|cluster_id=chr9:64659258..64659283,+ | |||
|description=CAGE_peak_1_at_Dennd4a_5end | |||
|id=chr9:64659258..64659283,+ | |||
|ontology_enrichment_celltype=CL:0000988!3.36e-07!32;CL:0002032!3.36e-07!32;CL:0000037!3.36e-07!32;CL:0000566!3.36e-07!32;CL:0000837!3.36e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.16e-07,32;CL:0002032,3.16e-07,32;CL:0000037,3.16e-07,32;CL:0000837,3.16e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!4.81e-11!70;UBERON:0005057!4.77e-10!51;UBERON:0002107!8.71e-08!22;UBERON:0007499!8.71e-08!22;UBERON:0006925!8.71e-08!22;UBERON:0009497!8.71e-08!22;UBERON:0000015!8.71e-08!22;UBERON:0002423!8.71e-08!22;UBERON:0006235!8.71e-08!22;UBERON:0008835!8.71e-08!22;UBERON:0003894!8.71e-08!22;UBERON:0004161!8.71e-08!22;UBERON:0008836!8.71e-08!22;UBERON:0002365!1.54e-07!25;UBERON:0002330!1.54e-07!25;UBERON:0009854!7.15e-07!23;UBERON:0009856!7.15e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,8.69e-08,22;UBERON:0007499,8.69e-08,22;UBERON:0006925,8.69e-08,22;UBERON:0009497,8.69e-08,22;UBERON:0000015,8.69e-08,22;UBERON:0002423,8.69e-08,22;UBERON:0006235,8.69e-08,22;UBERON:0008835,8.69e-08,22;UBERON:0003894,8.69e-08,22;UBERON:0004161,8.69e-08,22;UBERON:0008836,8.69e-08,22;UBERON:0002365,1.54e-07,25;UBERON:0002330,1.54e-07,25;UBERON:0009854,7.14e-07,23;UBERON:0009856,7.14e-07,23 | |||
|phase1_expression=11.3705681444404,2.09385244583617,0.909998478779072,0.60492842261366,0,0.839396359559449,1.63528848416868,25.3081713945489,73.069346796715,80.0500680021218,14.5535272991679,9.4131147614497,13.353656934634,13.1130603628496,38.3076226088012,53.6559458583039,29.3815988813822,77.1304994300891,83.5026900658949,92.9413337437686,8.67441559540912,20.0567721425788,28.7319768052829,7.83962871687693,7.34109699414944,1.14846392823004,2.15380998079537,2.80112602491656,0.380046838912748,0.756090389279792,1.33038306393183,8.25539875497521,5.53558308826113,0,0.288851619751275,0.166234645358492,0,101.703186269069,49.2241267049994,75.9109428762007,109.411056773769,104.505959198642,79.138187544078,15.1076181570693,10.8473316404881,4.58866880404204,3.9119567217402,1.52617609466313,0.439372365468944,1.55543919259427,1.25987779462826,0,208.721561935824,58.0289713609076,75.2850110079119,10.5476368774738,23.4957420749781,14.9544906760458,2.83243045203437,2.64495489636016,3.1691570175309,0,0.889294796111139,1.7997994345628,0.988866362566974,0,2.99600110518405,1.92109152660777,3.62913643079672,2.02508907497536,3.57552434297349,5.71301968807607,4.8591079009355,2.32732518508413,2.20444583341944,3.67687514644008,13.2139057199266,11.2364857514965,14.8998337258556,2.2420668914133,3.56801810049398,4.68822033501084,5.58365998002762,12.380777420697,12.2238598221448,8.83885756421003,8.11518580554887,3.72798891650601,6.81535739998656,4.91215140694106,14.4932244350839,10.3250865237766,10.1995700056163,11.3337670243942,18.8435161059824,22.4013443548668,10.2524426696179,4.4311883870295,1.81850203222008,1.06001872353102,17.6054274720851,8.98285341900225,7.64415719119937,21.3320010945999,0.216491041011214,0.253359865475099,0,11.6467557313441,88.5567562073327,11.7269289861212,2.94925055502431,3.34912026143355,4.84292544237723,5.87818298155228,11.170927177892,4.77533047052767,22.2475470960936,20.5331086826275,30.0767587662957,11.1619126463712,23.4092009568017,23.2740121504907,1.86391761218122,16.3957246326466,15.0801628905688,5.10914110417183,81.3544695395199,41.3932884385451,53.3694953706872,16.1773890557209,16.4700217014706,5.90575454930463,21.38039138365,24.2929684463814,12.6750707181332,17.0353326221146,10.0820970211813,23.7617313865278,3.28539585963777,5.89237196482127,4.29397461776922,8.04657365517155,8.64298223065676,15.0704817835715,20.6830957420037,24.9821754555457,18.1781345645874,18.1092359517311,2.15567992932842,4.72765200419548,4.75068035242662,3.94552318369635,8.61946472599353,5.2237824978325,7.61393904709391,1.59227413454795,39.3239384895411,28.5656176897334,33.2471294292843,3.72826390563903,3.98694301967864,3.24111710629827,3.07768156260773,4.52557733019029,3.70241070929708,4.18561100550734,2.14618721119695,4.43708300995244,3.78487654801005,5.91002870684743,6.72871119230603,5.70179950958796,3.95190207523891,5.36825675041487,18.7158054222073,5.24813523134351,8.26046957459495,3.17340679996253,1.49301775374664,4.18026009348789,4.89696353023955,4.63872106633688,3.11329261382818,3.61428689613862,2.84717436926707,3.95277491337626,4.52403375840485,5.37182474511107,6.82374304916921,3.59527763461689,3.8904848977445,3.98282546508734,0.379335801906163,3.77020091612105,1.1270773567308,3.46207257337034,2.90928730751439,2.80543279561274,4.42655759869801,3.09981310757165,5.18095801876537,4.31890073726302,15.1190839814446,21.0224833202278,24.7664333842636,24.9596944747188,38.1377028210385,47.7530776309785,37.9392519154315,40.2774592431135,35.9940203440579,25.5342114264916,25.8782771749238,23.0727387554472,21.5305994449047,14.6495749209325,15.2487801493625,22.1924019827149,27.5282253348241,4.73728529426212,4.56301934037672,6.95954851678271,6.80601720036656,7.70528784232352,7.61739650835244,11.5128852236101,19.8620281573801,19.710357378741,17.8589340896386,21.9576841719089,20.0314578964439,19.0936757327595,9.04747703635634,9.79030230873677,21.6376280128376,9.10591262805617,13.0045977890111,18.5194464815681,6.39346286969034,6.5642441073137,5.67914794949262,5.85658116444958,7.75524231838076,9.08081432219698,6.68396022247182,8.49229592366497,6.07216052512342,5.55286130031493,8.30104333687699,18.6366363524648,7.66476460124651,2.84904965867608,4.72372182125371,11.3829384851049,15.9294166007955,2.18502572539483,2.11626489875326,5.09233715340925,4.42952839321159,6.45613810682248,9.30341855405596,7.99774204850512,7.48644494607915,8.53299246426703,18.9753495434998,12.3762651897824,8.5109901438447,3.42116078659489,1.55230420539305,3.85806663056866,5.49754724291048,7.66985915688903,5.92376474167636,5.78483403317739,7.97883807416615,26.0553447162499,3.96951116498931,9.39851641766436,8.7190790415789,7.17723806645055,8.8335534562321,6.56563598980245,3.78925087618806,16.3174265769249,55.5330362593021,6.60437977482312,18.7046472643409,48.9757988212197,47.4328970191957,53.5340925303263,122.55444802557,100.205239863739,129.216975507136,0,2.21435195506795,3.65975040828328,3.78018692876304,4.59994251231831,4.80397640241591,5.79916689454729,8.5959593954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| |phase1_expression=11.3705681444404,2.09385244583617,0.909998478779072,0.60492842261366,0,0.839396359559449,1.63528848416868,25.3081713945489,73.069346796715,80.0500680021218,14.5535272991679,9.4131147614497,13.353656934634,13.1130603628496,38.3076226088012,53.6559458583039,29.3815988813822,77.1304994300891,83.5026900658949,92.9413337437686,8.67441559540912,20.0567721425788,28.7319768052829,7.83962871687693,7.34109699414944,1.14846392823004,2.15380998079537,2.80112602491656,0.380046838912748,0.756090389279792,1.33038306393183,8.25539875497521,5.53558308826113,0,0.288851619751275,0.166234645358492,0,101.703186269069,49.2241267049994,75.9109428762007,109.411056773769,104.505959198642,79.138187544078,15.1076181570693,10.8473316404881,4.58866880404204,3.9119567217402,1.52617609466313,0.439372365468944,1.55543919259427,1.25987779462826,0,208.721561935824,58.0289713609076,75.2850110079119,10.5476368774738,23.4957420749781,14.9544906760458,2.83243045203437,2.64495489636016,3.1691570175309,0,0.889294796111139,1.7997994345628,0.988866362566974,0,2.99600110518405,1.92109152660777,3.62913643079672,2.02508907497536,3.57552434297349,5.71301968807607,4.8591079009355,2.32732518508413,2.20444583341944,3.67687514644008,13.2139057199266,11.2364857514965,14.8998337258556,2.2420668914133,3.56801810049398,4.68822033501084,5.58365998002762,12.380777420697,12.2238598221448,8.83885756421003,8.11518580554887,3.72798891650601,6.81535739998656,4.91215140694106,14.4932244350839,10.3250865237766,10.1995700056163,11.3337670243942,18.8435161059824,22.4013443548668,10.2524426696179,4.4311883870295,1.81850203222008,1.06001872353102,17.6054274720851,8.98285341900225,7.64415719119937,21.3320010945999,0.216491041011214,0.253359865475099,0,11.6467557313441,88.5567562073327,11.7269289861212,2.94925055502431,3.34912026143355,4.84292544237723,5.87818298155228,11.170927177892,4.77533047052767,22.2475470960936,20.5331086826275,30.0767587662957,11.1619126463712,23.4092009568017,23.2740121504907,1.86391761218122,16.3957246326466,15.0801628905688,5.10914110417183,81.3544695395199,41.3932884385451,53.3694953706872,16.1773890557209,16.4700217014706,5.90575454930463,21.38039138365,24.2929684463814,12.6750707181332,17.0353326221146,10.0820970211813,23.7617313865278,3.28539585963777,5.89237196482127,4.29397461776922,8.04657365517155,8.64298223065676,15.0704817835715,20.6830957420037,24.9821754555457,18.1781345645874,18.1092359517311,2.15567992932842,4.72765200419548,4.75068035242662,3.94552318369635,8.61946472599353,5.2237824978325,7.61393904709391,1.59227413454795,39.3239384895411,28.5656176897334,33.2471294292843,3.72826390563903,3.98694301967864,3.24111710629827,3.07768156260773,4.52557733019029,3.70241070929708,4.18561100550734,2.14618721119695,4.43708300995244,3.78487654801005,5.91002870684743,6.72871119230603,5.70179950958796,3.95190207523891,5.36825675041487,18.7158054222073,5.24813523134351,8.26046957459495,3.17340679996253,1.49301775374664,4.18026009348789,4.89696353023955,4.63872106633688,3.11329261382818,3.61428689613862,2.84717436926707,3.95277491337626,4.52403375840485,5.37182474511107,6.82374304916921,3.59527763461689,3.8904848977445,3.98282546508734,0.379335801906163,3.77020091612105,1.1270773567308,3.46207257337034,2.90928730751439,2.80543279561274,4.42655759869801,3.09981310757165,5.18095801876537,4.31890073726302,15.1190839814446,21.0224833202278,24.7664333842636,24.9596944747188,38.1377028210385,47.7530776309785,37.9392519154315,40.2774592431135,35.9940203440579,25.5342114264916,25.8782771749238,23.0727387554472,21.5305994449047,14.6495749209325,15.2487801493625,22.1924019827149,27.5282253348241,4.73728529426212,4.56301934037672,6.95954851678271,6.80601720036656,7.70528784232352,7.61739650835244,11.5128852236101,19.8620281573801,19.710357378741,17.8589340896386,21.9576841719089,20.0314578964439,19.0936757327595,9.04747703635634,9.79030230873677,21.6376280128376,9.10591262805617,13.0045977890111,18.5194464815681,6.39346286969034,6.5642441073137,5.67914794949262,5.85658116444958,7.75524231838076,9.08081432219698,6.68396022247182,8.49229592366497,6.07216052512342,5.55286130031493,8.30104333687699,18.6366363524648,7.66476460124651,2.84904965867608,4.72372182125371,11.3829384851049,15.9294166007955,2.18502572539483,2.11626489875326,5.09233715340925,4.42952839321159,6.45613810682248,9.30341855405596,7.99774204850512,7.48644494607915,8.53299246426703,18.9753495434998,12.3762651897824,8.5109901438447,3.42116078659489,1.55230420539305,3.85806663056866,5.49754724291048,7.66985915688903,5.92376474167636,5.78483403317739,7.97883807416615,26.0553447162499,3.96951116498931,9.39851641766436,8.7190790415789,7.17723806645055,8.8335534562321,6.56563598980245,3.78925087618806,16.3174265769249,55.5330362593021,6.60437977482312,18.7046472643409,48.9757988212197,47.4328970191957,53.5340925303263,122.55444802557,100.205239863739,129.216975507136,0,2.21435195506795,3.65975040828328,3.78018692876304,4.59994251231831,4.80397640241591,5.79916689454729,8.5959593954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| ||
|short_description=p1@Dennd4a | |||
}} | }} |
Latest revision as of 00:06, 27 September 2015
Short description: | p1@Dennd4a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dennd4a_5end |
Coexpression cluster: | MCL_coexpression_mm9:374 |
Association with transcript: | 19bp_to_ENSMUST00000098640_5end |
EntrezGene: | Dennd4a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.16e-07 | 32 |
hematopoietic oligopotent progenitor cell | 3.16e-07 | 32 |
hematopoietic stem cell | 3.16e-07 | 32 |
hematopoietic multipotent progenitor cell | 3.16e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
liver | 8.69e-08 | 22 |
epithelial sac | 8.69e-08 | 22 |
digestive gland | 8.69e-08 | 22 |
epithelium of foregut-midgut junction | 8.69e-08 | 22 |
anatomical boundary | 8.69e-08 | 22 |
hepatobiliary system | 8.69e-08 | 22 |
foregut-midgut junction | 8.69e-08 | 22 |
hepatic diverticulum | 8.69e-08 | 22 |
liver primordium | 8.69e-08 | 22 |
septum transversum | 8.69e-08 | 22 |
liver bud | 8.69e-08 | 22 |
exocrine gland | 1.54e-07 | 25 |
exocrine system | 1.54e-07 | 25 |
digestive tract diverticulum | 7.14e-07 | 23 |
sac | 7.14e-07 | 23 |