FFCP PHASE1:Mm9::chr9:120088783..120088795,+: Difference between revisions
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|id=chr9:120088783..120088795,+
|short_description=p@chr9:120088783..120088795,+
|description=CAGE_peak_at_chr9:120088783..120088795,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=212 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:120088783..120088795,+ | |||
|description=CAGE_peak_at_chr9:120088783..120088795,+ | |||
|id=chr9:120088783..120088795,+ | |||
|ontology_enrichment_celltype=CL:0002610!7.06e-12!3;CL:0002614!2.16e-11!3;CL:0000117!8.31e-11!23;CL:0000337!8.31e-11!23;CL:0000540!4.48e-07!33;CL:0000047!4.48e-07!33;CL:0000031!4.48e-07!33;CL:0000404!4.48e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.42e-23,3;CL:0002614,1.55e-22,3;CL:0000117,1.62e-11,23;CL:0000337,1.62e-11,23;CL:0000540,6.04e-08,33;CL:0000047,6.04e-08,33;CL:0000031,6.04e-08,33;CL:0000404,6.04e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.41e-24!52;UBERON:0005068!1.41e-24!52;UBERON:0006241!1.41e-24!52;UBERON:0007135!1.41e-24!52;UBERON:0002616!2.17e-24!49;UBERON:0000955!7.98e-24!50;UBERON:0006238!7.98e-24!50;UBERON:0001017!1.03e-22!73;UBERON:0005743!1.03e-22!73;UBERON:0000073!5.44e-22!75;UBERON:0001016!5.44e-22!75;UBERON:0002298!1.06e-20!6;UBERON:0000033!4.24e-18!63;UBERON:0002346!6.35e-17!71;UBERON:0003075!6.35e-17!71;UBERON:0007284!6.35e-17!71;UBERON:0003076!1.68e-16!12;UBERON:0003057!1.68e-16!12;UBERON:0004121!5.22e-15!102;UBERON:0000924!5.22e-15!102;UBERON:0006601!5.22e-15!102;UBERON:0002950!3.38e-14!4;UBERON:0001891!3.38e-14!4;UBERON:0009616!3.38e-14!4;UBERON:0002020!4.15e-14!34;UBERON:0007811!3.38e-12!86;UBERON:0004684!7.06e-12!3;UBERON:0002275!7.06e-12!3;UBERON:0003080!7.77e-12!40;UBERON:0002038!2.16e-11!3;UBERON:0002308!2.16e-11!3;UBERON:0009663!2.16e-11!3;UBERON:0009661!2.16e-11!3;UBERON:0006331!2.16e-11!3;UBERON:0000125!2.16e-11!3;UBERON:0000153!8.06e-11!94;UBERON:0002780!2.45e-10!39;UBERON:0001890!2.45e-10!39;UBERON:0006240!2.45e-10!39;UBERON:0002791!5.11e-10!29;UBERON:0003528!5.11e-10!29;UBERON:0001893!5.11e-10!29;UBERON:0004733!2.70e-09!6;UBERON:0004732!2.70e-09!6;UBERON:0002028!2.70e-09!6;UBERON:0007277!2.70e-09!6;UBERON:0003056!3.37e-09!49;UBERON:0000025!5.38e-09!114;UBERON:0002240!1.01e-08!6;UBERON:0005174!1.01e-08!6;UBERON:0001137!1.01e-08!6;UBERON:0001896!3.86e-08!2;UBERON:0005290!3.86e-08!2;UBERON:0010096!3.86e-08!2;UBERON:0004111!3.90e-08!122;UBERON:0002420!2.36e-07!8;UBERON:0007245!2.36e-07!8;UBERON:0010009!2.36e-07!8;UBERON:0010011!2.36e-07!8;UBERON:0000454!2.36e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,1.42e-23,3;UBERON:0002275,1.42e-23,3;UBERON:0002038,1.55e-22,3;UBERON:0009663,1.55e-22,3;UBERON:0009661,1.55e-22,3;UBERON:0000125,1.55e-22,3;UBERON:0002308,1.55e-22,3;UBERON:0002950,4.42e-17,4;UBERON:0001891,4.42e-17,4;UBERON:0009616,4.42e-17,4;UBERON:0010286,4.42e-17,4;UBERON:0000073,1.13e-15,54;UBERON:0001896,1.35e-15,2;UBERON:0002298,1.35e-15,2;UBERON:0005290,1.35e-15,2;UBERON:0010096,1.35e-15,2;UBERON:0002420,5.49e-15,8;UBERON:0007245,5.49e-15,8;UBERON:0010009,5.49e-15,8;UBERON:0010011,5.49e-15,8;UBERON:0000454,5.49e-15,8;UBERON:0001017,1.35e-13,73;UBERON:0001016,3.30e-13,75;UBERON:0001049,1.43e-10,52;UBERON:0005068,1.43e-10,52;UBERON:0006241,1.43e-10,52;UBERON:0007135,1.43e-10,52;UBERON:0004121,3.22e-10,95;UBERON:0000924,3.22e-10,95;UBERON:0006601,3.22e-10,95;UBERON:0002616,1.49e-09,46;UBERON:0000955,2.46e-09,47;UBERON:0006238,2.46e-09,47;UBERON:0002346,1.94e-08,64;UBERON:0003075,1.94e-08,64;UBERON:0007284,1.94e-08,64;UBERON:0010371,2.71e-07,73 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441737081903227,0,0,0,8.8092704799511,4.46905683298157,4.14737639791857,0,0,0,1.11673199600552,1.68828783009504,4.43114918552749,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,0.299581278809645,1.83000241127451,0,0.173824320192276,0.255715457330331,0.83115217823824,1.62241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,2.22702204525186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,0.572895513439397,0.859265911718438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441737081903227,0,0,0,8.8092704799511,4.46905683298157,4.14737639791857,0,0,0,1.11673199600552,1.68828783009504,4.43114918552749,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,0.299581278809645,1.83000241127451,0,0.173824320192276,0.255715457330331,0.83115217823824,1.62241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,2.22702204525186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,0.572895513439397,0.859265911718438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr9:120088783..120088795,+ | |||
}} | }} |
Latest revision as of 18:00, 4 August 2015
Short description: | p@chr9:120088783..120088795, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:120088783..120088795, + |
Coexpression cluster: | MCL_coexpression_mm9:212 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.42e-23 | 3 |
neuron of the substantia nigra | 1.55e-22 | 3 |
CNS neuron (sensu Vertebrata) | 1.62e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.62e-11 | 23 |
neuron | 6.04e-08 | 33 |
neuronal stem cell | 6.04e-08 | 33 |
neuroblast | 6.04e-08 | 33 |
electrically signaling cell | 6.04e-08 | 33 |