FFCP PHASE1:Mm9::chr7:52148044..52148062,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:52148044..52148062,-
|short_description=p2@Med25
|description=CAGE_peak_2_at_Med25_5end
|association_with_transcript=-265bp_to_ENSMUST00000003049,ENSMUST00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=75613 | |EntrezGene=75613 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=Q8VCB2 | |UniProt=Q8VCB2 | ||
|association_with_transcript=-265bp_to_ENSMUST00000003049,ENSMUST00000163197,ENSMUST00000169739_5end | |||
|cluster_id=chr7:52148044..52148062,- | |||
|description=CAGE_peak_2_at_Med25_5end | |||
|id=chr7:52148044..52148062,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,1.01e-19,8;CL:0000128,2.83e-18,6;CL:0000126,2.83e-18,6;CL:0000127,2.83e-18,6;CL:0000333,1.07e-15,10;CL:0000095,1.07e-15,10;CL:0000243,1.07e-15,10;CL:0000123,1.07e-15,10;CL:0000125,1.07e-15,10;CL:0000030,1.07e-15,10;CL:0000339,1.07e-15,10;CL:0002605,2.13e-09,2;CL:0002604,2.13e-09,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,5.93e-14,8;UBERON:0003296,5.93e-14,8;UBERON:0010133,5.93e-14,8;UBERON:0001894,3.92e-11,10;UBERON:0006222,3.92e-11,10;UBERON:0001017,7.36e-07,73 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33720779770456,0.0992909512008853,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.202753862439029,0.367093504323363,0,2.61630187656536,1.09843091367236,1.1665793944457,1.1198913730029,2.87505128729943,0,0,0,0.514518872071894,0.286533439938757,0.515672092277442,0.404632921719196,1.05798195854407,0,1.0165335962074,0,0,0,0,0.599200221036809,4.99483796918021,0.622137673850866,0.675029691658453,0.210324961351382,0.571301968807607,0.220868540951614,0.489963196859816,0.479227355091182,0,0,0,0,0.395658863190582,0.731901148819277,0.52091337055676,0,0,0.15279824777681,0.294628585473668,0,0.559198337475902,0.227178579999552,0.0755715601067855,0,0,0,0.539703191637817,0,0,0.421333260395256,0.340860645156116,0.259786004602869,0,0.704217098883403,2.56652954828636,0,0,0.432982082022428,0.253359865475099,0,0.22836775943812,0.258937883647172,0.148442139064825,0.520455980298408,0,0.230615497256059,0.150722640552623,0.470354828542819,0.125666591329675,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0,0,0,0.209446706813455,0,0.11981512450592,0,0.127070227073065,0.299581278809645,0,0.376963056338593,0,0,0.41557608911912,0,0.81471491080253,0.124406970610093,0,0,0.130120442962704,0.689706313300419,0.180062129805349,0.452114453507145,0.612328492361951,0.640568601424249,0.187403449119458,0.258703370739016,0.431135985865684,0.378212160335639,0.175951124163949,0.43839146485515,0,0.348252166522167,0,0,0,0.257347907114715,0,0.828503090142008,0.469052119962192,0.180062061461015,0.710234206755631,0.787056926989615,0.154267112887378,0.232533944750408,0.268273401399619,0.700592054203017,0.16455984991348,0,0.162137619091711,0,0,0.134206418760372,0,0.823236899034275,0,0,0.639864751605702,0,0.257734922644187,0.403367049246685,0.444756087689741,0.190225626112559,0,0.329397909448022,0.251335208800269,0,0.19496408711912,0,0,0,0.758671603812327,0.342745537829186,1.1270773567308,0.407302655690628,0,0.631222379012867,0.252946148497029,0.442830443938806,0,0.246794327843601,0,0,0,0,0.405720242777006,0,0.763877555344259,0,0,0.274561413188081,0,0.372140947668503,0,0,0,0.482443521363367,0.369506380333209,0.37898282354097,0.488894929326078,0.339490171550376,0.938760993154008,0.502518772325447,0,0,0.315270288212382,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0.631016438832513,0.390438744296638,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0.292255857911312,0,0.321321316421807,0.709700426041343,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,0,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0.900305470156551,1.55230420539305,1.28602221018955,1.77340233642274,1.42695054081656,0.987294123612726,2.43571959291679,0,0.42366414172764,0,0,0.161464426695906,0.120625849856312,0.238744688006273,0,0,0.556275906031529,0,0.619160603889667,0,0,0,0,0.169978429993855,0,0,0,0.474503990371703,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0,0,24.8024893021044,0.448549638131936,0,0.388902376688095,0.774958940866387,0.337912250981556,1.29092962510329,0.39061315453185,0.314578033277133,1.20792060413003,12.0972602628303,0.316011120628178,0,0.308132871494482,0.129920822977795,0,0.39736270956253,0.120195449519969,0.147689527174577,0.100966449948148,0.15241361331,0,0.0974578807397524,0.192423683280659,0,0,0.221985953374065,0.0897138566094757,0.167884616364078,0,0.563047426353546,0.183151624267265,0,0,0,0,0,0.343706364687375,0,0.755393897389701,0.675022500231806,0,0,0,0.518936737920883,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0.44449345560323,0,0.64183841918363,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0.342869252385415,0.177475806159338,0,0,0,0.25384382367503,0.548783918618318,0.263069711437843,0.271608227691724,0.561142271657738,0.118635018124174,0,0.409231043169689,0,0,0.499621155875892,0.233931608445408,0.429742108096597,0.191288332068843,0.220591419119515,0.463735671240843 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|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33720779770456,0.0992909512008853,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.202753862439029,0.367093504323363,0,2.61630187656536,1.09843091367236,1.1665793944457,1.1198913730029,2.87505128729943,0,0,0,0.514518872071894,0.286533439938757,0.515672092277442,0.404632921719196,1.05798195854407,0,1.0165335962074,0,0,0,0,0.599200221036809,4.99483796918021,0.622137673850866,0.675029691658453,0.210324961351382,0.571301968807607,0.220868540951614,0.489963196859816,0.479227355091182,0,0,0,0,0.395658863190582,0.731901148819277,0.52091337055676,0,0,0.15279824777681,0.294628585473668,0,0.559198337475902,0.227178579999552,0.0755715601067855,0,0,0,0.539703191637817,0,0,0.421333260395256,0.340860645156116,0.259786004602869,0,0.704217098883403,2.56652954828636,0,0,0.432982082022428,0.253359865475099,0,0.22836775943812,0.258937883647172,0.148442139064825,0.520455980298408,0,0.230615497256059,0.150722640552623,0.470354828542819,0.125666591329675,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0,0,0,0.209446706813455,0,0.11981512450592,0,0.127070227073065,0.299581278809645,0,0.376963056338593,0,0,0.41557608911912,0,0.81471491080253,0.124406970610093,0,0,0.130120442962704,0.689706313300419,0.180062129805349,0.452114453507145,0.612328492361951,0.640568601424249,0.187403449119458,0.258703370739016,0.431135985865684,0.378212160335639,0.175951124163949,0.43839146485515,0,0.348252166522167,0,0,0,0.257347907114715,0,0.828503090142008,0.469052119962192,0.180062061461015,0.710234206755631,0.787056926989615,0.154267112887378,0.232533944750408,0.268273401399619,0.700592054203017,0.16455984991348,0,0.162137619091711,0,0,0.134206418760372,0,0.823236899034275,0,0,0.639864751605702,0,0.257734922644187,0.403367049246685,0.444756087689741,0.190225626112559,0,0.329397909448022,0.251335208800269,0,0.19496408711912,0,0,0,0.758671603812327,0.342745537829186,1.1270773567308,0.407302655690628,0,0.631222379012867,0.252946148497029,0.442830443938806,0,0.246794327843601,0,0,0,0,0.405720242777006,0,0.763877555344259,0,0,0.274561413188081,0,0.372140947668503,0,0,0,0.482443521363367,0.369506380333209,0.37898282354097,0.488894929326078,0.339490171550376,0.938760993154008,0.502518772325447,0,0,0.315270288212382,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0.631016438832513,0.390438744296638,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0.292255857911312,0,0.321321316421807,0.709700426041343,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,0,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0.900305470156551,1.55230420539305,1.28602221018955,1.77340233642274,1.42695054081656,0.987294123612726,2.43571959291679,0,0.42366414172764,0,0,0.161464426695906,0.120625849856312,0.238744688006273,0,0,0.556275906031529,0,0.619160603889667,0,0,0,0,0.169978429993855,0,0,0,0.474503990371703,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0,0,24.8024893021044,0.448549638131936,0,0.388902376688095,0.774958940866387,0.337912250981556,1.29092962510329,0.39061315453185,0.314578033277133,1.20792060413003,12.0972602628303,0.316011120628178,0,0.308132871494482,0.129920822977795,0,0.39736270956253,0.120195449519969,0.147689527174577,0.100966449948148,0.15241361331,0,0.0974578807397524,0.192423683280659,0,0,0.221985953374065,0.0897138566094757,0.167884616364078,0,0.563047426353546,0.183151624267265,0,0,0,0,0,0.343706364687375,0,0.755393897389701,0.675022500231806,0,0,0,0.518936737920883,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0.44449345560323,0,0.64183841918363,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0.342869252385415,0.177475806159338,0,0,0,0.25384382367503,0.548783918618318,0.263069711437843,0.271608227691724,0.561142271657738,0.118635018124174,0,0.409231043169689,0,0,0.499621155875892,0.233931608445408,0.429742108096597,0.191288332068843,0.220591419119515,0.463735671240843 | ||
|short_description=p2@Med25 | |||
}} | }} |
Latest revision as of 20:28, 26 September 2015
Short description: | p2@Med25 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Med25_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -265bp_to_ENSMUST00000003049, ENSMUST00000163197, ENSMUST00000169739_5end |
EntrezGene: | Med25 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 1.01e-19 | 8 |
oligodendrocyte | 2.83e-18 | 6 |
macroglial cell | 2.83e-18 | 6 |
astrocyte | 2.83e-18 | 6 |
migratory neural crest cell | 1.07e-15 | 10 |
neuron associated cell | 1.07e-15 | 10 |
glial cell (sensu Vertebrata) | 1.07e-15 | 10 |
neuron associated cell (sensu Vertebrata) | 1.07e-15 | 10 |
glial cell | 1.07e-15 | 10 |
glioblast | 1.07e-15 | 10 |
glioblast (sensu Vertebrata) | 1.07e-15 | 10 |
astrocyte of the cerebral cortex | 2.13e-09 | 2 |
astrocyte of the hippocampus | 2.13e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 5.93e-14 | 8 |
gland of diencephalon | 5.93e-14 | 8 |
neuroendocrine gland | 5.93e-14 | 8 |
diencephalon | 3.92e-11 | 10 |
future diencephalon | 3.92e-11 | 10 |
central nervous system | 7.36e-07 | 73 |