FFCP PHASE1:Mm9::chr7:29346120..29346131,-: Difference between revisions
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|id=chr7:29346120..29346131,-
|short_description=p@chr7:29346120..29346131,-
|description=CAGE_peak_at_chr7:29346120..29346131,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=293 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:29346120..29346131,- | |||
|description=CAGE_peak_at_chr7:29346120..29346131,- | |||
|id=chr7:29346120..29346131,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002611,3.45e-15,2;CL:0000878,1.44e-14,2;CL:0000129,1.44e-14,2;CL:0002194,9.75e-08,4;CL:0000766,9.75e-08,4;CL:0000234,9.75e-08,4;CL:0000576,9.75e-08,4;CL:0000235,9.75e-08,4;CL:0000864,9.75e-08,4;CL:0002009,9.75e-08,4;CL:0000040,9.75e-08,4;CL:0000559,9.75e-08,4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!1.90e-18!86;UBERON:0000153!2.33e-17!94;UBERON:0001049!4.51e-13!52;UBERON:0005068!4.51e-13!52;UBERON:0006241!4.51e-13!52;UBERON:0007135!4.51e-13!52;UBERON:0001017!5.36e-13!73;UBERON:0005743!5.36e-13!73;UBERON:0000073!1.83e-12!75;UBERON:0001016!1.83e-12!75;UBERON:0000955!1.19e-11!50;UBERON:0006238!1.19e-11!50;UBERON:0000063!6.52e-11!35;UBERON:0002616!9.93e-11!49;UBERON:0002298!1.36e-10!6;UBERON:0002370!1.87e-10!23;UBERON:0000974!1.87e-10!23;UBERON:0004807!1.87e-10!23;UBERON:0005058!1.87e-10!23;UBERON:0003351!1.87e-10!23;UBERON:0009113!1.87e-10!23;UBERON:0003295!1.87e-10!23;UBERON:0009722!1.87e-10!23;UBERON:0005562!1.87e-10!23;UBERON:0007690!1.87e-10!23;UBERON:0002020!2.31e-10!34;UBERON:0000064!5.80e-10!99;UBERON:0006562!6.78e-10!24;UBERON:0003408!6.78e-10!24;UBERON:0001557!6.78e-10!24;UBERON:0001042!6.78e-10!24;UBERON:0008814!6.78e-10!24;UBERON:0009145!6.78e-10!24;UBERON:0003076!1.77e-09!12;UBERON:0003057!1.77e-09!12;UBERON:0000033!3.96e-09!63;UBERON:0002346!5.71e-09!71;UBERON:0003075!5.71e-09!71;UBERON:0007284!5.71e-09!71;UBERON:0000072!1.81e-08!27;UBERON:0004121!4.03e-08!102;UBERON:0000924!4.03e-08!102;UBERON:0006601!4.03e-08!102;UBERON:0004177!1.09e-07!29;UBERON:0002950!1.77e-07!4;UBERON:0001891!1.77e-07!4;UBERON:0009616!1.77e-07!4;UBERON:0001948!2.95e-07!5;UBERON:0002315!2.95e-07!5;UBERON:0002021!3.17e-07!10;UBERON:0000411!3.17e-07!10;UBERON:0001950!3.17e-07!10;UBERON:0000477!5.80e-07!154 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.81e-17,10;UBERON:0000411,4.81e-17,10;UBERON:0001950,4.81e-17,10;UBERON:0002020,2.07e-15,34;UBERON:0002256,3.45e-15,2;UBERON:0001948,4.18e-13,5;UBERON:0002315,4.18e-13,5;UBERON:0001017,2.42e-12,73;UBERON:0001049,3.59e-12,52;UBERON:0005068,3.59e-12,52;UBERON:0006241,3.59e-12,52;UBERON:0007135,3.59e-12,52;UBERON:0001016,5.54e-12,75;UBERON:0000073,1.11e-11,54;UBERON:0002240,5.11e-11,6;UBERON:0005174,5.11e-11,6;UBERON:0001137,5.11e-11,6;UBERON:0002619,4.97e-10,17;UBERON:0002346,1.07e-09,64;UBERON:0003075,1.07e-09,64;UBERON:0007284,1.07e-09,64;UBERON:0003076,1.55e-09,12;UBERON:0003057,1.55e-09,12;UBERON:0004121,3.35e-09,95;UBERON:0000924,3.35e-09,95;UBERON:0006601,3.35e-09,95;UBERON:0010371,2.28e-08,73;UBERON:0003528,3.93e-08,29;UBERON:0002791,3.93e-08,29;UBERON:0001893,3.93e-08,29;UBERON:0000956,4.14e-08,21;UBERON:0001869,4.14e-08,21;UBERON:0000203,4.14e-08,21;UBERON:0002616,9.96e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09720077362883,1.92109152660777,0,0,0,2.57085885963423,4.8591079009355,0,0,0,0,0.383062014255563,0.153606533256243,0,0,0,0.558365998002762,0.56276261003168,0.45839474333043,0.883885756421003,1.56608848879013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0.149790639404823,1.37250180845588,0,0,0.767146371990992,0.20778804455956,0.486723789203273,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,2.34423373184406,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0.410843828659309,0.51968329191118,0.716106782669926,0.198681354781265,1.44234539423963,0.295379054349154,0.403865799792591,0.685861259894999,0.201652370273681,0.487289403698762,0.192423683280659,0.116876902181569,0,0,0,0,0,0,0,0,0,1.12950368523413,3.22227665555024,4.01026859407578,1.89038500578056,0.685082519770642,0,2.02506750069542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50695859978048,0.188626341386076,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0.463735671240843 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09720077362883,1.92109152660777,0,0,0,2.57085885963423,4.8591079009355,0,0,0,0,0.383062014255563,0.153606533256243,0,0,0,0.558365998002762,0.56276261003168,0.45839474333043,0.883885756421003,1.56608848879013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0.149790639404823,1.37250180845588,0,0,0.767146371990992,0.20778804455956,0.486723789203273,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,2.34423373184406,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0.410843828659309,0.51968329191118,0.716106782669926,0.198681354781265,1.44234539423963,0.295379054349154,0.403865799792591,0.685861259894999,0.201652370273681,0.487289403698762,0.192423683280659,0.116876902181569,0,0,0,0,0,0,0,0,0,1.12950368523413,3.22227665555024,4.01026859407578,1.89038500578056,0.685082519770642,0,2.02506750069542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50695859978048,0.188626341386076,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0.463735671240843 | ||
|short_description=p@chr7:29346120..29346131,- | |||
}} | }} |
Latest revision as of 23:12, 4 August 2015
Short description: | p@chr7:29346120..29346131, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:29346120..29346131, - |
Coexpression cluster: | MCL_coexpression_mm9:293 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the dorsal spinal cord | 3.45e-15 | 2 |
central nervous system macrophage | 1.44e-14 | 2 |
microglial cell | 1.44e-14 | 2 |
monopoietic cell | 9.75e-08 | 4 |
myeloid leukocyte | 9.75e-08 | 4 |
phagocyte | 9.75e-08 | 4 |
monocyte | 9.75e-08 | 4 |
macrophage | 9.75e-08 | 4 |
tissue-resident macrophage | 9.75e-08 | 4 |
macrophage dendritic cell progenitor | 9.75e-08 | 4 |
monoblast | 9.75e-08 | 4 |
promonocyte | 9.75e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 4.81e-17 | 10 |
visual cortex | 4.81e-17 | 10 |
neocortex | 4.81e-17 | 10 |
gray matter | 2.07e-15 | 34 |
dorsal horn of spinal cord | 3.45e-15 | 2 |
regional part of spinal cord | 4.18e-13 | 5 |
gray matter of spinal cord | 4.18e-13 | 5 |
central nervous system | 2.42e-12 | 73 |
neural tube | 3.59e-12 | 52 |
neural rod | 3.59e-12 | 52 |
future spinal cord | 3.59e-12 | 52 |
neural keel | 3.59e-12 | 52 |
nervous system | 5.54e-12 | 75 |
regional part of nervous system | 1.11e-11 | 54 |
spinal cord | 5.11e-11 | 6 |
dorsal region element | 5.11e-11 | 6 |
dorsum | 5.11e-11 | 6 |
regional part of cerebral cortex | 4.97e-10 | 17 |
neurectoderm | 1.07e-09 | 64 |
neural plate | 1.07e-09 | 64 |
presumptive neural plate | 1.07e-09 | 64 |
posterior neural tube | 1.55e-09 | 12 |
chordal neural plate | 1.55e-09 | 12 |
ectoderm-derived structure | 3.35e-09 | 95 |
ectoderm | 3.35e-09 | 95 |
presumptive ectoderm | 3.35e-09 | 95 |
ecto-epithelium | 2.28e-08 | 73 |
brain grey matter | 3.93e-08 | 29 |
regional part of telencephalon | 3.93e-08 | 29 |
telencephalon | 3.93e-08 | 29 |
cerebral cortex | 4.14e-08 | 21 |
cerebral hemisphere | 4.14e-08 | 21 |
pallium | 4.14e-08 | 21 |
regional part of brain | 9.96e-07 | 46 |