Personal tools

FFCP PHASE1:Mm9::chr7:29075714..29075740,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr7:29075714..29075740,- |short_description=p@chr7:29075714..29075740,- |description=CAGE_peak_at_chr7:29075714..29075740,- |association_with_transcript=NA |E...")
 
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr7:29075714..29075740,-
|DHSsupport=NA
|short_description=p@chr7:29075714..29075740,-
|DPIdataset=NA
|description=CAGE_peak_at_chr7:29075714..29075740,-
|association_with_transcript=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=293
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr7:29075714..29075740,-
|description=CAGE_peak_at_chr7:29075714..29075740,-
|id=chr7:29075714..29075740,-
|ontology_enrichment_celltype=CL:0002453!8.89e-07!8
|ontology_enrichment_celltype_v019_2=CL:0002453,3.98e-14,8;CL:0000128,3.37e-11,6;CL:0000126,3.37e-11,6;CL:0000127,3.37e-11,6;CL:0000333,5.93e-11,10;CL:0000095,5.93e-11,10;CL:0000243,5.93e-11,10;CL:0000123,5.93e-11,10;CL:0000125,5.93e-11,10;CL:0000030,5.93e-11,10;CL:0000339,5.93e-11,10;CL:0002319,9.45e-11,43;CL:0000221,2.16e-10,44;CL:0000133,2.16e-10,44;CL:0000117,2.68e-07,23;CL:0000337,2.68e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.12e-20!73;UBERON:0005743!1.12e-20!73;UBERON:0000073!9.74e-20!75;UBERON:0001016!9.74e-20!75;UBERON:0001049!2.29e-19!52;UBERON:0005068!2.29e-19!52;UBERON:0006241!2.29e-19!52;UBERON:0007135!2.29e-19!52;UBERON:0002346!7.87e-19!71;UBERON:0003075!7.87e-19!71;UBERON:0007284!7.87e-19!71;UBERON:0000955!3.58e-18!50;UBERON:0006238!3.58e-18!50;UBERON:0004121!8.59e-18!102;UBERON:0000924!8.59e-18!102;UBERON:0006601!8.59e-18!102;UBERON:0002616!1.04e-17!49;UBERON:0000033!3.22e-15!63;UBERON:0003080!2.00e-13!40;UBERON:0002780!7.26e-13!39;UBERON:0001890!7.26e-13!39;UBERON:0006240!7.26e-13!39;UBERON:0002020!6.84e-12!34;UBERON:0003056!7.12e-12!49;UBERON:0002791!6.78e-09!29;UBERON:0003528!6.78e-09!29;UBERON:0001893!6.78e-09!29;UBERON:0002021!1.60e-07!10;UBERON:0000411!1.60e-07!10;UBERON:0001950!1.60e-07!10;UBERON:0000153!2.40e-07!94;UBERON:0007811!2.55e-07!86;UBERON:0002619!5.97e-07!17;UBERON:0003076!7.43e-07!12;UBERON:0003057!7.43e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.89e-33,54;UBERON:0001017,1.87e-30,73;UBERON:0001016,2.32e-29,75;UBERON:0001049,2.53e-28,52;UBERON:0005068,2.53e-28,52;UBERON:0006241,2.53e-28,52;UBERON:0007135,2.53e-28,52;UBERON:0002616,1.15e-23,46;UBERON:0000955,5.40e-23,47;UBERON:0006238,5.40e-23,47;UBERON:0002346,5.79e-23,64;UBERON:0003075,5.79e-23,64;UBERON:0007284,5.79e-23,64;UBERON:0004121,2.35e-22,95;UBERON:0000924,2.35e-22,95;UBERON:0006601,2.35e-22,95;UBERON:0003080,1.51e-21,40;UBERON:0002780,2.49e-20,39;UBERON:0001890,2.49e-20,39;UBERON:0006240,2.49e-20,39;UBERON:0002020,1.33e-19,34;UBERON:0010371,5.17e-19,73;UBERON:0003056,6.84e-18,49;UBERON:0003528,1.43e-14,29;UBERON:0002791,1.43e-14,29;UBERON:0001893,1.43e-14,29;UBERON:0010314,2.80e-14,92;UBERON:0002021,3.91e-14,10;UBERON:0000411,3.91e-14,10;UBERON:0001950,3.91e-14,10;UBERON:0002619,1.43e-11,17;UBERON:0000956,1.95e-10,21;UBERON:0001869,1.95e-10,21;UBERON:0000203,1.95e-10,21;UBERON:0000025,5.91e-09,114;UBERON:0004111,7.98e-08,122;UBERON:0002950,2.67e-07,4;UBERON:0001891,2.67e-07,4;UBERON:0009616,2.67e-07,4;UBERON:0010286,2.67e-07,4;UBERON:0003076,3.24e-07,12;UBERON:0003057,3.24e-07,12;UBERON:0001948,8.59e-07,5;UBERON:0002315,8.59e-07,5;UBERON:0001894,9.26e-07,10;UBERON:0006222,9.26e-07,10
|phase1_expression=0.320297694209588,0,0.454999239389536,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.38869613217647,3.2703773457067,5.71184075109627,6.9994763666742,2.2397827460058,1.43752564364972,0,0,0,0,0.286533439938757,0.515672092277442,0.606949382578793,0,1.90149421051854,2.03306719241479,0.889294796111139,0,0,0,1.79760066311043,3.07374644257244,0.103689612308478,0,0,5.42736870367227,10.1599528837742,0.122490799214954,0.0958454710182364,0,1.10115880999389,1.53224805702225,3.07213066512487,0.527545150920775,0.274462930807229,0.52091337055676,1.67509799400829,2.8138130501584,2.75036845998258,5.89257170947335,5.41012387036591,0.745597783301202,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.346970653532272,0.913396434936424,0.230615497256059,1.3565037649736,0.940709657085638,0.251333182659351,0,0.144599356919912,0,0.161766849947409,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,1.79748767285787,4.11750542536764,1.88481528169297,1.39059456153821,1.27857728665165,1.24672826735736,2.27137768294861,1.12023300235348,0.497627882440372,0.252722758433675,0,0,0,0.180062129805349,0.150704817835715,0.340182495756639,0.384341160854549,0.468508622798644,1.81092359517311,0,0,1.05570674498369,0.43839146485515,0.278047249225598,0.696504333044333,0.411564272815887,0.995171334092466,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0,0,0.164167464079095,0,0,0,0,0.630869845692382,0.205809224758569,0,0,0.639864751605702,0.464473343720877,0.38660238396628,0.201683524623343,0.444756087689741,0.190225626112559,0,0,0.502670417600539,0,0,0,0,0,0.569003702859245,0.228497025219458,1.1270773567308,0.610953983535943,0,0.280543279561274,0.189709611372772,0,0.156998727841375,0,0,0,0,0,0.202860121388503,0,0.25462585178142,0.287696137450811,0,0.274561413188081,0,0,0,0,0,0,0,0,0.488894929326078,0.678980343100753,0.234690248288502,0.167506257441816,0.238043640886014,0.195133647857799,0.315270288212382,0,0.318909537314974,0,0.172684981865896,0,0,0,0,0,1.9266070798535,0.937693492737625,0,0,0.631016438832513,0,0.646270193198397,0,0.445597348164788,0,0,0,0,0.963963949265421,0.283880170416537,1.95872164033981,1.62886959353576,0.659880491890142,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0.258428293168221,1.09060118843252,0.712994756769443,0.316036757935816,0,0,0.680879211507576,0.18006109403131,1.55230420539305,1.07168517515796,1.06404140185364,2.14042581122485,1.31639216481697,0.608929898229199,0,0,0.220528398054962,0,0.645857706783622,0.422190474497091,0.477489376012546,0.328281799490123,0,0.370850604021019,0,0,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0,0,0,0.632671987162271,0.813277868507395,0.324016022465404,0.418176592028937,0.436725127492355,0.404593039154462,0.41326727862668,0,0.648074866458964,0,1.12738587736838,0.897099276263873,1.32366792365678,0.777804753376191,0.129159823477731,0.675824501963113,1.40828686374905,0.781226309063701,0.838874755405687,0.483168241652012,0.288030006257865,0,0.202725215290164,0.308132871494482,0.25984164595559,0,0,0,0.147689527174577,0.100966449948148,0,0,0,0,0,0,0.887943813496259,0.269141569828427,0.503653849092235,0,0,0,0.214368379079066,0,7.90652579663893,7.36520378411483,10.3121192419091,4.46818274093588,2.05524755931193,2.2661816921691,2.02506750069542,3.15224842256954,0.453142408984205,1.55328093525546,0.31136204275253,0,0.512200817262403,0.243106717068294,0.628839487883947,0.183843508450014,0.44449345560323,0,0,0.758091635291392,0.50695859978048,0.377252682772152,0.280924522409647,0.256100609619477,0.229741875822453,0,0.347652977834566,0.578727661391115,0,0.441596760403192,1.02860775715625,0.354951612318675,0.476872379894642,1.0174249164263,0.470546902076653,0.169229215783353,0.182927972872773,0,0.271608227691724,0,0.355905054372522,0.492522411877817,0,0.619747364743864,0.192906610981141,0,0.701794825336225,0.429742108096597,0.382576664137687,0.661774257358546,0.463735671240843
|phase1_expression=0.320297694209588,0,0.454999239389536,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.38869613217647,3.2703773457067,5.71184075109627,6.9994763666742,2.2397827460058,1.43752564364972,0,0,0,0,0.286533439938757,0.515672092277442,0.606949382578793,0,1.90149421051854,2.03306719241479,0.889294796111139,0,0,0,1.79760066311043,3.07374644257244,0.103689612308478,0,0,5.42736870367227,10.1599528837742,0.122490799214954,0.0958454710182364,0,1.10115880999389,1.53224805702225,3.07213066512487,0.527545150920775,0.274462930807229,0.52091337055676,1.67509799400829,2.8138130501584,2.75036845998258,5.89257170947335,5.41012387036591,0.745597783301202,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.346970653532272,0.913396434936424,0.230615497256059,1.3565037649736,0.940709657085638,0.251333182659351,0,0.144599356919912,0,0.161766849947409,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,1.79748767285787,4.11750542536764,1.88481528169297,1.39059456153821,1.27857728665165,1.24672826735736,2.27137768294861,1.12023300235348,0.497627882440372,0.252722758433675,0,0,0,0.180062129805349,0.150704817835715,0.340182495756639,0.384341160854549,0.468508622798644,1.81092359517311,0,0,1.05570674498369,0.43839146485515,0.278047249225598,0.696504333044333,0.411564272815887,0.995171334092466,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0,0,0.164167464079095,0,0,0,0,0.630869845692382,0.205809224758569,0,0,0.639864751605702,0.464473343720877,0.38660238396628,0.201683524623343,0.444756087689741,0.190225626112559,0,0,0.502670417600539,0,0,0,0,0,0.569003702859245,0.228497025219458,1.1270773567308,0.610953983535943,0,0.280543279561274,0.189709611372772,0,0.156998727841375,0,0,0,0,0,0.202860121388503,0,0.25462585178142,0.287696137450811,0,0.274561413188081,0,0,0,0,0,0,0,0,0.488894929326078,0.678980343100753,0.234690248288502,0.167506257441816,0.238043640886014,0.195133647857799,0.315270288212382,0,0.318909537314974,0,0.172684981865896,0,0,0,0,0,1.9266070798535,0.937693492737625,0,0,0.631016438832513,0,0.646270193198397,0,0.445597348164788,0,0,0,0,0.963963949265421,0.283880170416537,1.95872164033981,1.62886959353576,0.659880491890142,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0.258428293168221,1.09060118843252,0.712994756769443,0.316036757935816,0,0,0.680879211507576,0.18006109403131,1.55230420539305,1.07168517515796,1.06404140185364,2.14042581122485,1.31639216481697,0.608929898229199,0,0,0.220528398054962,0,0.645857706783622,0.422190474497091,0.477489376012546,0.328281799490123,0,0.370850604021019,0,0,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0,0,0,0.632671987162271,0.813277868507395,0.324016022465404,0.418176592028937,0.436725127492355,0.404593039154462,0.41326727862668,0,0.648074866458964,0,1.12738587736838,0.897099276263873,1.32366792365678,0.777804753376191,0.129159823477731,0.675824501963113,1.40828686374905,0.781226309063701,0.838874755405687,0.483168241652012,0.288030006257865,0,0.202725215290164,0.308132871494482,0.25984164595559,0,0,0,0.147689527174577,0.100966449948148,0,0,0,0,0,0,0.887943813496259,0.269141569828427,0.503653849092235,0,0,0,0.214368379079066,0,7.90652579663893,7.36520378411483,10.3121192419091,4.46818274093588,2.05524755931193,2.2661816921691,2.02506750069542,3.15224842256954,0.453142408984205,1.55328093525546,0.31136204275253,0,0.512200817262403,0.243106717068294,0.628839487883947,0.183843508450014,0.44449345560323,0,0,0.758091635291392,0.50695859978048,0.377252682772152,0.280924522409647,0.256100609619477,0.229741875822453,0,0.347652977834566,0.578727661391115,0,0.441596760403192,1.02860775715625,0.354951612318675,0.476872379894642,1.0174249164263,0.470546902076653,0.169229215783353,0.182927972872773,0,0.271608227691724,0,0.355905054372522,0.492522411877817,0,0.619747364743864,0.192906610981141,0,0.701794825336225,0.429742108096597,0.382576664137687,0.661774257358546,0.463735671240843
|short_description=p@chr7:29075714..29075740,-
}}
}}

Latest revision as of 22:45, 4 August 2015

Short description:p@chr7:29075714..29075740, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr7:29075714..29075740, -
Coexpression cluster:MCL_coexpression_mm9:293
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr7:29075714..29075740-

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B79.39
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.27
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.71
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.24
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D510.16
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.89
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F51.36
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.80
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F11.88
cortex, adult.CNhs10473.12-14D51.39
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B22.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C71.55
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B71.41
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.31
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.47
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system5.89e-3354
central nervous system1.87e-3073
nervous system2.32e-2975
neural tube2.53e-2852
neural rod2.53e-2852
future spinal cord2.53e-2852
neural keel2.53e-2852
regional part of brain1.15e-2346
brain5.40e-2347
future brain5.40e-2347
neurectoderm5.79e-2364
neural plate5.79e-2364
presumptive neural plate5.79e-2364
ectoderm-derived structure2.35e-2295
ectoderm2.35e-2295
presumptive ectoderm2.35e-2295
anterior neural tube1.51e-2140
regional part of forebrain2.49e-2039
forebrain2.49e-2039
future forebrain2.49e-2039
gray matter1.33e-1934
ecto-epithelium5.17e-1973
pre-chordal neural plate6.84e-1849
brain grey matter1.43e-1429
regional part of telencephalon1.43e-1429
telencephalon1.43e-1429
structure with developmental contribution from neural crest2.80e-1492
occipital lobe3.91e-1410
visual cortex3.91e-1410
neocortex3.91e-1410
regional part of cerebral cortex1.43e-1117
cerebral cortex1.95e-1021
cerebral hemisphere1.95e-1021
pallium1.95e-1021
tube5.91e-09114
anatomical conduit7.98e-08122
regional part of midbrain2.67e-074
midbrain2.67e-074
presumptive midbrain2.67e-074
midbrain neural tube2.67e-074
posterior neural tube3.24e-0712
chordal neural plate3.24e-0712
regional part of spinal cord8.59e-075
gray matter of spinal cord8.59e-075
diencephalon9.26e-0710
future diencephalon9.26e-0710
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr7:29075714..29075740,-&oldid=3829774"