FFCP PHASE1:Mm9::chr6:123237055..123237057,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:123237055..123237057,-
|short_description=p@chr6:123237055..123237057,-
|description=CAGE_peak_at_chr6:123237055..123237057,-
|association_with_transcript=...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=193 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:123237055..123237057,- | |||
|description=CAGE_peak_at_chr6:123237055..123237057,- | |||
|id=chr6:123237055..123237057,- | |||
|ontology_enrichment_celltype=CL:0000557!2.91e-11!7;CL:0000049!3.14e-09!19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,1.41e-18,7;CL:0002476,1.55e-17,2;CL:0000049,1.65e-10,19;CL:0002194,3.05e-09,4;CL:0000766,3.05e-09,4;CL:0000234,3.05e-09,4;CL:0000576,3.05e-09,4;CL:0000235,3.05e-09,4;CL:0000864,3.05e-09,4;CL:0002009,3.05e-09,4;CL:0000040,3.05e-09,4;CL:0000559,3.05e-09,4;CL:0000355,1.25e-08,9;CL:0000763,2.60e-08,16 | |||
|ontology_enrichment_disease=DOID:0060100!2.51e-10!3;DOID:4045!2.51e-10!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.36e-24,3;DOID:4045,1.36e-24,3;DOID:0050686,1.20e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0002204!1.48e-09!32;UBERON:0001474!1.28e-07!22;UBERON:0004765!1.28e-07!22;UBERON:0001434!1.28e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,6.58e-12,32;UBERON:0001134,1.25e-08,9;UBERON:0002036,1.25e-08,9;UBERON:0002385,1.25e-08,9;UBERON:0000486,1.25e-08,9;UBERON:0007503,1.25e-08,9;UBERON:0001015,1.25e-08,9;UBERON:0002329,1.25e-08,9;UBERON:0003082,1.25e-08,9;UBERON:0003059,1.25e-08,9;UBERON:0007282,1.25e-08,9;UBERON:0004290,1.25e-08,9;UBERON:0009618,1.25e-08,9;UBERON:0002371,2.60e-08,16;UBERON:0000383,8.07e-08,10;UBERON:0007524,3.71e-07,11;UBERON:0003077,3.71e-07,11;UBERON:0007285,3.71e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92972141515835,3.1253413780952,4.18818995179039,14.7057872007754,5.46436387966757,2.91306211818692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0.479260498023681,0,1.14363204365758,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,1.02939162845886,1.70498099637356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,9.04747703635634,13.053736411649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0.370389054739423,0,0,0,0.169978429993855,0.139951452323658,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92972141515835,3.1253413780952,4.18818995179039,14.7057872007754,5.46436387966757,2.91306211818692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0.479260498023681,0,1.14363204365758,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,1.02939162845886,1.70498099637356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,9.04747703635634,13.053736411649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0.370389054739423,0,0,0,0.169978429993855,0.139951452323658,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:123237055..123237057,- | |||
}} | }} |
Latest revision as of 02:43, 5 August 2015
Short description: | p@chr6:123237055..123237057, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:123237055..123237057, - |
Coexpression cluster: | MCL_coexpression_mm9:193 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 1.41e-18 | 7 |
bone marrow macrophage | 1.55e-17 | 2 |
common myeloid progenitor | 1.65e-10 | 19 |
monopoietic cell | 3.05e-09 | 4 |
myeloid leukocyte | 3.05e-09 | 4 |
phagocyte | 3.05e-09 | 4 |
monocyte | 3.05e-09 | 4 |
macrophage | 3.05e-09 | 4 |
tissue-resident macrophage | 3.05e-09 | 4 |
macrophage dendritic cell progenitor | 3.05e-09 | 4 |
monoblast | 3.05e-09 | 4 |
promonocyte | 3.05e-09 | 4 |
multi-potent skeletal muscle stem cell | 1.25e-08 | 9 |
myeloid cell | 2.60e-08 | 16 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 6.58e-12 | 32 |
skeletal muscle tissue | 1.25e-08 | 9 |
striated muscle tissue | 1.25e-08 | 9 |
muscle tissue | 1.25e-08 | 9 |
multilaminar epithelium | 1.25e-08 | 9 |
epithelial vesicle | 1.25e-08 | 9 |
musculature | 1.25e-08 | 9 |
somite | 1.25e-08 | 9 |
myotome | 1.25e-08 | 9 |
presomitic mesoderm | 1.25e-08 | 9 |
presumptive segmental plate | 1.25e-08 | 9 |
dermomyotome | 1.25e-08 | 9 |
trunk paraxial mesoderm | 1.25e-08 | 9 |
bone marrow | 2.60e-08 | 16 |
musculature of body | 8.07e-08 | 10 |
dense mesenchyme tissue | 3.71e-07 | 11 |
paraxial mesoderm | 3.71e-07 | 11 |
presumptive paraxial mesoderm | 3.71e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.36e-24 | 3 |
muscle cancer | 1.36e-24 | 3 |
organ system cancer | 1.20e-12 | 6 |