FFCP PHASE1:Mm9::chr6:120723567..120723597,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:120723567..120723597,+
|short_description=p1@Slc25a18
|description=CAGE_peak_1_at_Slc25a18_5end
|association_with_transcript=-188bp_to_ENSMUST00000112682,N...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=71803 | |EntrezGene=71803 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=519 | |||
|TSSclassifier=NA | |||
|UniProt=Q9DB41 | |UniProt=Q9DB41 | ||
|association_with_transcript=-188bp_to_ENSMUST00000112682,NM_001081048,uc009dnq.1_5end | |||
|cluster_id=chr6:120723567..120723597,+ | |||
|description=CAGE_peak_1_at_Slc25a18_5end | |||
|id=chr6:120723567..120723597,+ | |||
|ontology_enrichment_celltype=CL:0000117!7.54e-12!23;CL:0000337!7.54e-12!23;CL:0000221!1.28e-09!44;CL:0000133!1.28e-09!44;CL:0002319!2.90e-09!43;CL:0000055!8.33e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.38e-14,23;CL:0000337,5.38e-14,23;CL:0002319,1.13e-12,43;CL:0000221,3.17e-12,44;CL:0000133,3.17e-12,44;CL:0000540,2.93e-08,33;CL:0000047,2.93e-08,33;CL:0000031,2.93e-08,33;CL:0000404,2.93e-08,33;CL:0002453,1.02e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.28e-31!73;UBERON:0005743!9.28e-31!73;UBERON:0000073!2.25e-29!75;UBERON:0001016!2.25e-29!75;UBERON:0001049!3.29e-28!52;UBERON:0005068!3.29e-28!52;UBERON:0006241!3.29e-28!52;UBERON:0007135!3.29e-28!52;UBERON:0000955!1.22e-26!50;UBERON:0006238!1.22e-26!50;UBERON:0002616!1.21e-25!49;UBERON:0000033!1.94e-23!63;UBERON:0004121!1.18e-20!102;UBERON:0000924!1.18e-20!102;UBERON:0006601!1.18e-20!102;UBERON:0002020!3.38e-20!34;UBERON:0002346!1.86e-19!71;UBERON:0003075!1.86e-19!71;UBERON:0007284!1.86e-19!71;UBERON:0003080!5.60e-19!40;UBERON:0002780!5.62e-18!39;UBERON:0001890!5.62e-18!39;UBERON:0006240!5.62e-18!39;UBERON:0003056!1.05e-16!49;UBERON:0002791!8.91e-16!29;UBERON:0003528!8.91e-16!29;UBERON:0001893!8.91e-16!29;UBERON:0007811!1.00e-12!86;UBERON:0002619!2.29e-10!17;UBERON:0000153!2.41e-10!94;UBERON:0003076!7.09e-10!12;UBERON:0003057!7.09e-10!12;UBERON:0000956!8.00e-10!21;UBERON:0001869!8.00e-10!21;UBERON:0000203!8.00e-10!21;UBERON:0002021!1.89e-09!10;UBERON:0000411!1.89e-09!10;UBERON:0001950!1.89e-09!10;UBERON:0002420!1.58e-07!8;UBERON:0007245!1.58e-07!8;UBERON:0010009!1.58e-07!8;UBERON:0010011!1.58e-07!8;UBERON:0000454!1.58e-07!8;UBERON:0002298!1.70e-07!6;UBERON:0002240!7.62e-07!6;UBERON:0005174!7.62e-07!6;UBERON:0001137!7.62e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.03e-34,73;UBERON:0001016,2.12e-33,75;UBERON:0000073,2.03e-31,54;UBERON:0001049,1.15e-28,52;UBERON:0005068,1.15e-28,52;UBERON:0006241,1.15e-28,52;UBERON:0007135,1.15e-28,52;UBERON:0002020,2.80e-25,34;UBERON:0004121,2.53e-23,95;UBERON:0000924,2.53e-23,95;UBERON:0006601,2.53e-23,95;UBERON:0000955,8.18e-23,47;UBERON:0006238,8.18e-23,47;UBERON:0002616,1.27e-21,46;UBERON:0002346,4.11e-21,64;UBERON:0003075,4.11e-21,64;UBERON:0007284,4.11e-21,64;UBERON:0003528,2.65e-19,29;UBERON:0002791,2.65e-19,29;UBERON:0001893,2.65e-19,29;UBERON:0010371,4.11e-17,73;UBERON:0003080,6.42e-17,40;UBERON:0002780,9.87e-16,39;UBERON:0001890,9.87e-16,39;UBERON:0006240,9.87e-16,39;UBERON:0003076,2.97e-13,12;UBERON:0003057,2.97e-13,12;UBERON:0002619,1.03e-12,17;UBERON:0002021,1.99e-12,10;UBERON:0000411,1.99e-12,10;UBERON:0001950,1.99e-12,10;UBERON:0003056,2.27e-12,49;UBERON:0010314,2.49e-11,92;UBERON:0000956,2.53e-11,21;UBERON:0001869,2.53e-11,21;UBERON:0000203,2.53e-11,21;UBERON:0002420,8.74e-10,8;UBERON:0007245,8.74e-10,8;UBERON:0010009,8.74e-10,8;UBERON:0010011,8.74e-10,8;UBERON:0000454,8.74e-10,8;UBERON:0002240,7.59e-09,6;UBERON:0005174,7.59e-09,6;UBERON:0001137,7.59e-09,6;UBERON:0001948,1.61e-07,5;UBERON:0002315,1.61e-07,5;UBERON:0000025,3.40e-07,114;UBERON:0002950,4.36e-07,4;UBERON:0001891,4.36e-07,4;UBERON:0009616,4.36e-07,4;UBERON:0010286,4.36e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.48380953329414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6454590700659,3.29529274101708,3.4997381833371,5.17949760013841,18.6878333674463,0,0,0,0,0,0,4.04632921719196,6.34789175126439,6.97214543856797,0.338844532069132,0,0,0.988866362566974,0,52.7296194512392,174.050892310664,0,0,0.210324961351382,39.7054868321287,41.3024171579517,0,0.383381884072945,0,70.4741638396088,51.0749352340751,52.5334343736353,3.03338461779446,2.92760459527711,1.04182674111352,50.8113058182513,48.9603470727562,59.2857201374023,37.7124589406295,35.5929201997757,10.0655700745662,0,0,0,0,0,0,0,0,2.24711072210803,0,0,0,0.704217098883403,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.1336956413857,19.8974371472782,0,0,0,0,82.2350610332477,25.1625331550245,4.52355667606312,46.2372691711455,27.105838477015,59.8429568331533,29.8523924044674,0,0,0,0.420883711772948,0,0,0,0,0.136072998302656,0.384341160854549,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.697841513081,4.52780294468852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,60.6881230153854,36.5700462167674,0,0,0,0,0,0,0,0,0,0,0,46.2702695647402,0.425820255624806,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.900305470156551,0.258717367565509,0.428674070063185,0,0,0.164549020602121,0.913394847343798,0,0,0,0,0,0,0,0,0,50.0648315428376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0.183151624267265,0,0,20.3310663342144,20.2543104063158,20.0513429703789,16.497905504994,26.0331357512844,29.4603619981983,19.5756525067224,29.7211994127986,34.8919654917838,16.5683299760582,0.415149390336707,0,0.512200817262403,0,0.209613162627982,0.919217542250071,2.00022055021454,1.03017528619447,0.962757628775446,1.26348605881899,1.2673964994512,1.69763707247469,1.31098110457835,0.832326981263301,1.09127391015665,0,0.927074607558844,0.964546102318525,1.23625770240992,1.32479028120958,2.40008476669791,1.4198064492747,0.476872379894642,1.16277133305863,1.78807822789128,0.846146078916765,0.73171189149109,1.31534855718921,1.49384525230448,0.561142271657738,1.06771516311757,1.0835493061312,1.63692417267876,0.309873682371932,0.578719832943424,2.24829520144151,0.467863216890817,1.07435527024149,1.53030665655075,0.882365676478062,0.927471342481686 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.48380953329414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6454590700659,3.29529274101708,3.4997381833371,5.17949760013841,18.6878333674463,0,0,0,0,0,0,4.04632921719196,6.34789175126439,6.97214543856797,0.338844532069132,0,0,0.988866362566974,0,52.7296194512392,174.050892310664,0,0,0.210324961351382,39.7054868321287,41.3024171579517,0,0.383381884072945,0,70.4741638396088,51.0749352340751,52.5334343736353,3.03338461779446,2.92760459527711,1.04182674111352,50.8113058182513,48.9603470727562,59.2857201374023,37.7124589406295,35.5929201997757,10.0655700745662,0,0,0,0,0,0,0,0,2.24711072210803,0,0,0,0.704217098883403,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.1336956413857,19.8974371472782,0,0,0,0,82.2350610332477,25.1625331550245,4.52355667606312,46.2372691711455,27.105838477015,59.8429568331533,29.8523924044674,0,0,0,0.420883711772948,0,0,0,0,0.136072998302656,0.384341160854549,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.697841513081,4.52780294468852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,60.6881230153854,36.5700462167674,0,0,0,0,0,0,0,0,0,0,0,46.2702695647402,0.425820255624806,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.900305470156551,0.258717367565509,0.428674070063185,0,0,0.164549020602121,0.913394847343798,0,0,0,0,0,0,0,0,0,50.0648315428376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0.183151624267265,0,0,20.3310663342144,20.2543104063158,20.0513429703789,16.497905504994,26.0331357512844,29.4603619981983,19.5756525067224,29.7211994127986,34.8919654917838,16.5683299760582,0.415149390336707,0,0.512200817262403,0,0.209613162627982,0.919217542250071,2.00022055021454,1.03017528619447,0.962757628775446,1.26348605881899,1.2673964994512,1.69763707247469,1.31098110457835,0.832326981263301,1.09127391015665,0,0.927074607558844,0.964546102318525,1.23625770240992,1.32479028120958,2.40008476669791,1.4198064492747,0.476872379894642,1.16277133305863,1.78807822789128,0.846146078916765,0.73171189149109,1.31534855718921,1.49384525230448,0.561142271657738,1.06771516311757,1.0835493061312,1.63692417267876,0.309873682371932,0.578719832943424,2.24829520144151,0.467863216890817,1.07435527024149,1.53030665655075,0.882365676478062,0.927471342481686 | ||
|short_description=p1@Slc25a18 | |||
}} | }} |
Latest revision as of 13:54, 26 September 2015
Short description: | p1@Slc25a18 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Slc25a18_5end |
Coexpression cluster: | MCL_coexpression_mm9:519 |
Association with transcript: | -188bp_to_ENSMUST00000112682, NM_001081048, uc009dnq.1_5end |
EntrezGene: | Slc25a18 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.38e-14 | 23 |
neuroblast (sensu Vertebrata) | 5.38e-14 | 23 |
neural cell | 1.13e-12 | 43 |
ectodermal cell | 3.17e-12 | 44 |
neurectodermal cell | 3.17e-12 | 44 |
neuron | 2.93e-08 | 33 |
neuronal stem cell | 2.93e-08 | 33 |
neuroblast | 2.93e-08 | 33 |
electrically signaling cell | 2.93e-08 | 33 |
oligodendrocyte precursor cell | 1.02e-07 | 8 |