FFCP PHASE1:Mm9::chr5:65194720..65194738,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:65194720..65194738,+
|short_description=p2@Klf3
|description=CAGE_peak_2_at_Klf3_5end
|association_with_transcript=-23bp_to_ENSMUST00000165536,NM_008453,uc...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=16599 | |EntrezGene=16599 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1384 | |||
|TSSclassifier=NA | |||
|UniProt=Q60980,Q545J5 | |UniProt=Q60980,Q545J5 | ||
|association_with_transcript=-23bp_to_ENSMUST00000165536,NM_008453,uc008xmr.1,uc008xms.1_5end | |||
|cluster_id=chr5:65194720..65194738,+ | |||
|description=CAGE_peak_2_at_Klf3_5end | |||
|id=chr5:65194720..65194738,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004921!3.38e-15!126;UBERON:0004185!3.38e-15!126;UBERON:0004119!6.25e-15!130;UBERON:0000925!6.25e-15!130;UBERON:0006595!6.25e-15!130;UBERON:0001007!6.72e-15!128;UBERON:0001555!6.72e-15!128;UBERON:0007026!6.72e-15!128;UBERON:0003104!1.86e-12!131;UBERON:0009142!1.86e-12!131;UBERON:0000926!2.94e-11!193;UBERON:0004120!2.94e-11!193;UBERON:0006603!2.94e-11!193;UBERON:0000077!7.95e-11!97;UBERON:0001041!1.81e-10!92;UBERON:0002405!5.02e-10!70;UBERON:0005911!1.61e-09!69;UBERON:0005057!7.08e-09!51;UBERON:0000490!6.58e-08!66;UBERON:0003929!2.61e-07!55;UBERON:0009569!9.20e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,5.06e-15,114;UBERON:0004119,1.05e-14,118;UBERON:0000925,1.05e-14,118;UBERON:0006595,1.05e-14,118;UBERON:0001007,1.07e-14,116;UBERON:0001555,1.07e-14,116;UBERON:0007026,1.07e-14,116;UBERON:0001041,1.64e-10,80;UBERON:0005911,1.42e-09,69;UBERON:0002100,1.27e-08,90;UBERON:0000490,6.53e-08,66;UBERON:0003929,2.34e-07,55;UBERON:0005177,3.63e-07,79;UBERON:0009569,9.03e-07,66 | |||
|phase1_expression=2.7225304007815,8.02643437570531,7.27998783023258,10.2837831844322,10.0179145989269,6.37941233265181,6.54115393667472,12.3958390503913,5.490760163915,5.14941957908386,0.513653904676515,0.797721589953364,12.6688540149092,11.7143339241457,20.9859149943868,25.9168342258977,46.1710839564577,10.567982539501,11.5176124228821,10.1853516431527,2.72138528483423,0.893618560807968,0.783599367416806,2.3998863419011,5.04700418347774,5.7423196411502,4.73838195774982,7.75696437669201,6.84084310042946,4.53654233567875,2.88249663851896,1.27006134691926,2.46025915033828,0,4.33277429626912,3.32469290716985,3.47087905646027,24.6933662134776,14.0640362014284,10.470474879476,15.2940186888064,16.3930916390027,14.5653105909346,3.39921408534059,6.38674666682942,4.58866880404204,4.69434806608824,2.61630187656536,3.07560655828261,4.6663175777828,3.63964696225943,0,7.55021727259814,9.42970784614748,20.8378155468328,5.40244815675489,4.87106847895886,5.67239301505187,0.809265843438391,0.528990979272033,0.633831403506179,3.72728985276045,4.4464739805557,4.94944844504769,3.9554654502679,11.3676818391376,4.19440154725767,3.84218305321555,1.55534418462716,0.945041568321835,2.52389953621658,1.42825492201902,0.441737081903227,0.489963196859816,0.575072826109418,0,1.10115880999389,0.893811366596314,0.768032666281217,0.923204014111357,0.823388792421687,0,0.279182999001381,0,1.06958773443767,1.76777151284201,1.85083185038834,1.1183966749518,3.25622631332691,3.02286240427142,11.3047150593654,5.16254326188832,9.51959867190851,2.69851595818909,1.94932925234301,1.79210754838934,3.23022166303029,2.89731548382698,0.519572009205738,3.5333957451034,0.845060518660083,1.28326477414318,12.7402619853323,0,3.68034769719064,3.80039798212648,6.0662933401774,5.82337786567206,15.5362730188303,3.56261133755579,2.77576522825817,2.43572382649713,3.22861696158482,2.71300752994721,7.05532242814229,3.89566433121994,15.3260879995312,6.2177723475562,15.9229899350977,5.98537344805414,9.71702681225732,11.1521308221101,7.45567044872489,0.878342391034642,0.83778682725382,7.40825460104915,1.7972268675888,2.39961092397363,2.41433431438823,0.748953197024114,0.457500602818626,1.38219787324151,0.695297280769106,0.255715457330331,0.83115217823824,1.29793010454206,7.12875546952214,9.33052279575698,2.77995034277042,5.6819301089348,3.513251959993,3.21862946206862,3.60124259610698,2.86339153887859,3.60593445502038,4.09963904911519,3.37326208415024,2.84573707812917,2.58681591519411,3.40390944302075,3.51902248327898,4.16471891612392,2.50242524303038,4.52727816478817,3.70407845534298,1.79130840136644,2.1066395619397,2.31613116403244,3.40996199274711,3.31401236056803,4.22146907965973,2.52086886045421,4.97163944728941,2.55793501271625,2.46827380619805,2.55787339225449,1.87791380979733,4.43708300995244,2.63295759861569,3.94001913789829,5.59374785866405,4.38599962275997,3.07370161407471,4.02619256281115,0.420579897128254,1.74937841044784,5.94753809370836,7.1401652999157,3.62590025909898,3.71578674976702,7.21657783403723,4.23535401709019,8.2279876222602,6.84812254005213,1.89811624617805,8.07024878147653,6.53471542880701,8.55512829776949,6.23885078781184,7.19055526923377,5.18731319699266,5.77509692437665,4.74169752382704,4.11294645395024,6.76246414038483,3.86937522906097,3.10323979468201,6.59276706968994,5.1853960441891,4.72352473534727,2.66897837330337,4.07210640941942,2.66807364378434,9.34332592010127,11.596980711679,10.3436571697033,20.4888722602388,15.6765153839071,9.16653066413111,13.2340223227373,20.2669033468794,5.49122826376163,11.5014565221884,8.18710084870708,4.99260276983297,4.79899868099512,3.94674309748207,5.78932225636041,11.0851914099963,3.41084541186873,3.91115943460862,3.73439188705414,3.98973422090454,6.19773152534718,6.66522194480839,9.75668239288994,6.77831119656621,9.96591103419487,7.81328366421687,8.68475567993411,7.59813920209941,7.5217510462386,3.01582567878545,3.26343410291226,0.491764273019036,4.96686143348518,0.80275294993896,1.05490517932983,5.40985319743029,4.54447668967871,2.2085575359138,2.34263246577983,5.38558494331997,1.91175038362042,3.7875774594007,7.92614286208731,2.83367491172426,3.21481443702443,1.97643888973262,3.53453448063988,5.10984306749767,3.73937767701236,8.63300884573953,7.9185659026817,5.30980553359851,2.91336763385978,2.41858845571801,3.96070667487386,4.42952839321159,7.07100840271033,7.75284879504663,4.72593848320757,7.84294232446387,4.74055136903724,2.10837217149998,7.21948802737308,1.70219802876894,3.06103859853227,2.19909762430683,1.92903331528433,3.72414490648775,3.92411398724555,1.81003922662333,5.48036908406279,3.75474732901937,5.50763384245932,2.8668691747145,12.036696464728,7.75029248140347,6.6947346670253,3.22305328808468,4.26766339337159,5.53813589596716,1.48340241608408,14.8657666294132,5.57244543500701,7.59297562215818,16.9531611304222,19.1371918809435,18.0734756833153,4.75939603982795,3.35883485576779,6.90999869022119,3.81868247206045,4.4287039101359,5.89626454667861,3.45617090629764,3.76358932826044,2.401988201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| |phase1_expression=2.7225304007815,8.02643437570531,7.27998783023258,10.2837831844322,10.0179145989269,6.37941233265181,6.54115393667472,12.3958390503913,5.490760163915,5.14941957908386,0.513653904676515,0.797721589953364,12.6688540149092,11.7143339241457,20.9859149943868,25.9168342258977,46.1710839564577,10.567982539501,11.5176124228821,10.1853516431527,2.72138528483423,0.893618560807968,0.783599367416806,2.3998863419011,5.04700418347774,5.7423196411502,4.73838195774982,7.75696437669201,6.84084310042946,4.53654233567875,2.88249663851896,1.27006134691926,2.46025915033828,0,4.33277429626912,3.32469290716985,3.47087905646027,24.6933662134776,14.0640362014284,10.470474879476,15.2940186888064,16.3930916390027,14.5653105909346,3.39921408534059,6.38674666682942,4.58866880404204,4.69434806608824,2.61630187656536,3.07560655828261,4.6663175777828,3.63964696225943,0,7.55021727259814,9.42970784614748,20.8378155468328,5.40244815675489,4.87106847895886,5.67239301505187,0.809265843438391,0.528990979272033,0.633831403506179,3.72728985276045,4.4464739805557,4.94944844504769,3.9554654502679,11.3676818391376,4.19440154725767,3.84218305321555,1.55534418462716,0.945041568321835,2.52389953621658,1.42825492201902,0.441737081903227,0.489963196859816,0.575072826109418,0,1.10115880999389,0.893811366596314,0.768032666281217,0.923204014111357,0.823388792421687,0,0.279182999001381,0,1.06958773443767,1.76777151284201,1.85083185038834,1.1183966749518,3.25622631332691,3.02286240427142,11.3047150593654,5.16254326188832,9.51959867190851,2.69851595818909,1.94932925234301,1.79210754838934,3.23022166303029,2.89731548382698,0.519572009205738,3.5333957451034,0.845060518660083,1.28326477414318,12.7402619853323,0,3.68034769719064,3.80039798212648,6.0662933401774,5.82337786567206,15.5362730188303,3.56261133755579,2.77576522825817,2.43572382649713,3.22861696158482,2.71300752994721,7.05532242814229,3.89566433121994,15.3260879995312,6.2177723475562,15.9229899350977,5.98537344805414,9.71702681225732,11.1521308221101,7.45567044872489,0.878342391034642,0.83778682725382,7.40825460104915,1.7972268675888,2.39961092397363,2.41433431438823,0.748953197024114,0.457500602818626,1.38219787324151,0.695297280769106,0.255715457330331,0.83115217823824,1.29793010454206,7.12875546952214,9.33052279575698,2.77995034277042,5.6819301089348,3.513251959993,3.21862946206862,3.60124259610698,2.86339153887859,3.60593445502038,4.09963904911519,3.37326208415024,2.84573707812917,2.58681591519411,3.40390944302075,3.51902248327898,4.16471891612392,2.50242524303038,4.52727816478817,3.70407845534298,1.79130840136644,2.1066395619397,2.31613116403244,3.40996199274711,3.31401236056803,4.22146907965973,2.52086886045421,4.97163944728941,2.55793501271625,2.46827380619805,2.55787339225449,1.87791380979733,4.43708300995244,2.63295759861569,3.94001913789829,5.59374785866405,4.38599962275997,3.07370161407471,4.02619256281115,0.420579897128254,1.74937841044784,5.94753809370836,7.1401652999157,3.62590025909898,3.71578674976702,7.21657783403723,4.23535401709019,8.2279876222602,6.84812254005213,1.89811624617805,8.07024878147653,6.53471542880701,8.55512829776949,6.23885078781184,7.19055526923377,5.18731319699266,5.77509692437665,4.74169752382704,4.11294645395024,6.76246414038483,3.86937522906097,3.10323979468201,6.59276706968994,5.1853960441891,4.72352473534727,2.66897837330337,4.07210640941942,2.66807364378434,9.34332592010127,11.596980711679,10.3436571697033,20.4888722602388,15.6765153839071,9.16653066413111,13.2340223227373,20.2669033468794,5.49122826376163,11.5014565221884,8.18710084870708,4.99260276983297,4.79899868099512,3.94674309748207,5.78932225636041,11.0851914099963,3.41084541186873,3.91115943460862,3.73439188705414,3.98973422090454,6.19773152534718,6.66522194480839,9.75668239288994,6.77831119656621,9.96591103419487,7.81328366421687,8.68475567993411,7.59813920209941,7.5217510462386,3.01582567878545,3.26343410291226,0.491764273019036,4.96686143348518,0.80275294993896,1.05490517932983,5.40985319743029,4.54447668967871,2.2085575359138,2.34263246577983,5.38558494331997,1.91175038362042,3.7875774594007,7.92614286208731,2.83367491172426,3.21481443702443,1.97643888973262,3.53453448063988,5.10984306749767,3.73937767701236,8.63300884573953,7.9185659026817,5.30980553359851,2.91336763385978,2.41858845571801,3.96070667487386,4.42952839321159,7.07100840271033,7.75284879504663,4.72593848320757,7.84294232446387,4.74055136903724,2.10837217149998,7.21948802737308,1.70219802876894,3.06103859853227,2.19909762430683,1.92903331528433,3.72414490648775,3.92411398724555,1.81003922662333,5.48036908406279,3.75474732901937,5.50763384245932,2.8668691747145,12.036696464728,7.75029248140347,6.6947346670253,3.22305328808468,4.26766339337159,5.53813589596716,1.48340241608408,14.8657666294132,5.57244543500701,7.59297562215818,16.9531611304222,19.1371918809435,18.0734756833153,4.75939603982795,3.35883485576779,6.90999869022119,3.81868247206045,4.4287039101359,5.89626454667861,3.45617090629764,3.76358932826044,2.401988201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| ||
|short_description=p2@Klf3 | |||
}} | }} |
Latest revision as of 03:07, 26 September 2015
Short description: | p2@Klf3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Klf3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1384 |
Association with transcript: | -23bp_to_ENSMUST00000165536, NM_008453, uc008xmr.1, uc008xms.1_5end |
EntrezGene: | Klf3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 5.06e-15 | 114 |
endoderm-derived structure | 1.05e-14 | 118 |
endoderm | 1.05e-14 | 118 |
presumptive endoderm | 1.05e-14 | 118 |
digestive system | 1.07e-14 | 116 |
digestive tract | 1.07e-14 | 116 |
primitive gut | 1.07e-14 | 116 |
foregut | 1.64e-10 | 80 |
endo-epithelium | 1.42e-09 | 69 |
trunk | 1.27e-08 | 90 |
unilaminar epithelium | 6.53e-08 | 66 |
gut epithelium | 2.34e-07 | 55 |
trunk region element | 3.63e-07 | 79 |
subdivision of trunk | 9.03e-07 | 66 |