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FFCP PHASE1:Mm9::chr5:135164426..135164433,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr5:135164426..135164433,-
|DHSsupport=NA
|short_description=p5@Limk1
|DPIdataset=NA
|description=CAGE_peak_5_at_Limk1_5end
|association_with_transcript=10bp_to_ENSMUST00000132027_5end
|EntrezGene=16885
|EntrezGene=16885
|HGNC=
|HGNC=
|MCL_coexpression_id=1322
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=10bp_to_ENSMUST00000132027_5end
|cluster_id=chr5:135164426..135164433,-
|description=CAGE_peak_5_at_Limk1_5end
|id=chr5:135164426..135164433,-
|ontology_enrichment_celltype=CL:0000540!3.20e-11!33;CL:0000047!3.20e-11!33;CL:0000031!3.20e-11!33;CL:0000404!3.20e-11!33;CL:0000221!9.46e-10!44;CL:0000133!9.46e-10!44;CL:0002319!1.10e-09!43;CL:0000117!5.95e-09!23;CL:0000337!5.95e-09!23;CL:0000393!5.25e-08!39;CL:0000211!5.25e-08!39;CL:0000055!8.31e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000540,1.02e-15,33;CL:0000047,1.02e-15,33;CL:0000031,1.02e-15,33;CL:0000404,1.02e-15,33;CL:0000393,1.16e-12,39;CL:0000211,1.16e-12,39;CL:0002319,1.27e-12,43;CL:0000221,3.09e-12,44;CL:0000133,3.09e-12,44;CL:0000117,5.70e-12,23;CL:0000337,5.70e-12,23;CL:0002610,8.08e-08,3;CL:0002614,1.74e-07,3;CL:0002612,2.13e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.56e-21!102;UBERON:0000924!1.56e-21!102;UBERON:0006601!1.56e-21!102;UBERON:0000073!1.24e-20!75;UBERON:0001016!1.24e-20!75;UBERON:0001017!5.02e-20!73;UBERON:0005743!5.02e-20!73;UBERON:0002346!1.30e-19!71;UBERON:0003075!1.30e-19!71;UBERON:0007284!1.30e-19!71;UBERON:0001049!7.99e-15!52;UBERON:0005068!7.99e-15!52;UBERON:0006241!7.99e-15!52;UBERON:0007135!7.99e-15!52;UBERON:0000955!5.53e-13!50;UBERON:0006238!5.53e-13!50;UBERON:0002616!6.95e-13!49;UBERON:0002020!1.57e-12!34;UBERON:0003056!4.48e-12!49;UBERON:0000033!7.68e-12!63;UBERON:0003080!9.26e-12!40;UBERON:0002780!3.86e-11!39;UBERON:0001890!3.86e-11!39;UBERON:0006240!3.86e-11!39;UBERON:0002791!2.48e-09!29;UBERON:0003528!2.48e-09!29;UBERON:0001893!2.48e-09!29;UBERON:0000153!9.09e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.58e-23,73;UBERON:0001016,3.59e-22,75;UBERON:0000073,7.85e-19,54;UBERON:0002346,2.29e-16,64;UBERON:0003075,2.29e-16,64;UBERON:0007284,2.29e-16,64;UBERON:0001049,4.24e-16,52;UBERON:0005068,4.24e-16,52;UBERON:0006241,4.24e-16,52;UBERON:0007135,4.24e-16,52;UBERON:0004121,5.88e-16,95;UBERON:0000924,5.88e-16,95;UBERON:0006601,5.88e-16,95;UBERON:0002240,4.27e-14,6;UBERON:0005174,4.27e-14,6;UBERON:0001137,4.27e-14,6;UBERON:0010371,1.36e-13,73;UBERON:0002020,2.93e-13,34;UBERON:0003076,6.42e-12,12;UBERON:0003057,6.42e-12,12;UBERON:0001948,7.71e-12,5;UBERON:0002315,7.71e-12,5;UBERON:0010314,1.62e-10,92;UBERON:0002950,1.61e-09,4;UBERON:0001891,1.61e-09,4;UBERON:0009616,1.61e-09,4;UBERON:0010286,1.61e-09,4;UBERON:0002616,8.92e-09,46;UBERON:0000955,1.64e-08,47;UBERON:0006238,1.64e-08,47;UBERON:0004684,8.08e-08,3;UBERON:0002275,8.08e-08,3;UBERON:0003080,1.23e-07,40;UBERON:0002038,1.74e-07,3;UBERON:0009663,1.74e-07,3;UBERON:0009661,1.74e-07,3;UBERON:0000125,1.74e-07,3;UBERON:0002308,1.74e-07,3;UBERON:0002257,2.13e-07,3;UBERON:0002021,2.85e-07,10;UBERON:0000411,2.85e-07,10;UBERON:0001950,2.85e-07,10;UBERON:0010313,4.26e-07,3;UBERON:0002342,4.26e-07,3;UBERON:0002005,4.26e-07,3;UBERON:0005428,4.26e-07,3;UBERON:0005062,4.26e-07,3;UBERON:0003528,6.11e-07,29;UBERON:0002791,6.11e-07,29;UBERON:0001893,6.11e-07,29;UBERON:0002420,9.55e-07,8;UBERON:0007245,9.55e-07,8;UBERON:0010009,9.55e-07,8;UBERON:0010011,9.55e-07,8;UBERON:0000454,9.55e-07,8
|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0,0.234064526321993,0,0.159544317990673,0.342401459862411,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.279972843250725,0,0,0,0,0.257259436035947,0,0,0.606949382578793,0,0.633831403506179,1.0165335962074,0,0,0.988866362566974,0,1.49800055259202,0.384218305321555,0.414758449233911,0.405017814995072,0.210324961351382,6.56997264128748,3.3130281142742,0.489963196859816,0.670918297127655,0,3.30347642998166,1.91531007127782,2.91852413186863,1.05509030184155,0.365950574409639,0.52091337055676,7.2587579740359,1.12552522006336,2.13917546887534,2.06240009831567,3.13217697758026,1.3047961207771,0.37863096666592,0.604572480854284,0,0,0,0,0,0,0,0.170430322578058,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.445326417194474,0.520455980298408,0.913396434936424,1.15307748628029,0.60289056221049,0.470354828542819,0.376999773989026,0.988779870937496,0,0,0,0,0.484875253135222,0,0,0.209446706813455,0,0,0,0,2.09706895166752,2.74500361691176,0.628271760564322,0.521472960576829,0.511430914660661,1.87009240103604,1.1356888414743,0.407357455401265,0.124406970610093,0,0,0,0.689706313300419,0.540186389416048,0.452114453507145,0.340182495756639,0.2562274405697,0.468508622798644,0.517406741478031,0,0.189106080167819,0.527853372491847,0,0.278047249225598,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0.284163499395593,0,0,0.180062061461015,0,0.196764231747404,0.308534225774757,0.465067889500816,0.268273401399619,0,0.16455984991348,0,0,0,0,0.268412837520744,0.210289948564127,0.411618449517138,0,0,0,0,0,0.605050573870028,0,0.190225626112559,0,0,0,0,0,0,0,0.199141273254367,0.569003702859245,0.228497025219458,0,0,0,0,0.126473074248515,0,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0.325929952884052,0.339490171550376,0,0.167506257441816,1.42826184531608,1.56106918286239,0.472905432318573,0.664394068946325,0.637819074629948,0.491589944147214,0.345369963731791,0.144649058581512,0,0,0,0,8.34863067936518,5.97779601620236,0,0,1.57754109708128,1.56175497718655,1.50796378412959,0.477937595905104,1.11399337041197,0.849229592366497,1.21443210502468,0.584511715822624,0,0.321321316421807,0.141940085208269,0.890328018336276,0.81443479676788,0.164970122972535,0,0,0,0,0.295301892880773,0.614870295887855,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0.258717367565509,0.428674070063185,0.709360934569094,0.535106452806212,0.493647061806363,0.608929898229199,4.4587624532105,0.847328283455281,0.220528398054962,0,0.322928853391811,0.241251699712623,0.119372344003136,0.164140899745061,0.291480836629851,6.30446026835733,0,0,0,0,0.136694227721025,0.228778173206523,0,0,0,0,0.474503990371703,0.406638934253697,0.216010681643603,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0,0,0.56369293868419,0.299033092087958,1.32366792365678,1.16670713006429,1.42075805825504,0.506868376472335,0.704143431874524,0.651021924219751,0.104859344425711,0.241584120826006,0,0,0.202725215290164,0.308132871494482,0.129920822977795,0,0,0.240390899039938,0.147689527174577,0.100966449948148,0,0,0.0974578807397524,0,0,0,0.665957860122194,2.06341870201794,0.671538465456314,0,1.12609485270709,0.183151624267265,0,0,1.6942555278512,0.460325236507177,1.71868654031819,1.20297227640581,0.685082519770642,0.755393897389701,0.675022500231806,1.80128481289688,3.62513927187364,1.03552062350364,0.726511433089237,0,0.341467211508268,0.243106717068294,0.419226325255965,0.367687016900028,0.666740183404846,0.206035057238894,0.320919209591815,0,0.25347929989024,0,0.280924522409647,0.192075457214608,0.402048282689293,0,0.579421629724277,0.192909220463705,0,0.441596760403192,0,0.177475806159338,0,0.290692833264657,0.376437521661322,0.0846146078916765,0,0,0,1.12228454331548,0.949080144993393,0.197008964751127,0.409231043169689,0.154936841185966,0,0,0.233931608445408,0.644613162144895,0.382576664137687,0.661774257358546,0.463735671240843
|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0,0.234064526321993,0,0.159544317990673,0.342401459862411,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.279972843250725,0,0,0,0,0.257259436035947,0,0,0.606949382578793,0,0.633831403506179,1.0165335962074,0,0,0.988866362566974,0,1.49800055259202,0.384218305321555,0.414758449233911,0.405017814995072,0.210324961351382,6.56997264128748,3.3130281142742,0.489963196859816,0.670918297127655,0,3.30347642998166,1.91531007127782,2.91852413186863,1.05509030184155,0.365950574409639,0.52091337055676,7.2587579740359,1.12552522006336,2.13917546887534,2.06240009831567,3.13217697758026,1.3047961207771,0.37863096666592,0.604572480854284,0,0,0,0,0,0,0,0.170430322578058,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.445326417194474,0.520455980298408,0.913396434936424,1.15307748628029,0.60289056221049,0.470354828542819,0.376999773989026,0.988779870937496,0,0,0,0,0.484875253135222,0,0,0.209446706813455,0,0,0,0,2.09706895166752,2.74500361691176,0.628271760564322,0.521472960576829,0.511430914660661,1.87009240103604,1.1356888414743,0.407357455401265,0.124406970610093,0,0,0,0.689706313300419,0.540186389416048,0.452114453507145,0.340182495756639,0.2562274405697,0.468508622798644,0.517406741478031,0,0.189106080167819,0.527853372491847,0,0.278047249225598,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0.284163499395593,0,0,0.180062061461015,0,0.196764231747404,0.308534225774757,0.465067889500816,0.268273401399619,0,0.16455984991348,0,0,0,0,0.268412837520744,0.210289948564127,0.411618449517138,0,0,0,0,0,0.605050573870028,0,0.190225626112559,0,0,0,0,0,0,0,0.199141273254367,0.569003702859245,0.228497025219458,0,0,0,0,0.126473074248515,0,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0.325929952884052,0.339490171550376,0,0.167506257441816,1.42826184531608,1.56106918286239,0.472905432318573,0.664394068946325,0.637819074629948,0.491589944147214,0.345369963731791,0.144649058581512,0,0,0,0,8.34863067936518,5.97779601620236,0,0,1.57754109708128,1.56175497718655,1.50796378412959,0.477937595905104,1.11399337041197,0.849229592366497,1.21443210502468,0.584511715822624,0,0.321321316421807,0.141940085208269,0.890328018336276,0.81443479676788,0.164970122972535,0,0,0,0,0.295301892880773,0.614870295887855,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0.258717367565509,0.428674070063185,0.709360934569094,0.535106452806212,0.493647061806363,0.608929898229199,4.4587624532105,0.847328283455281,0.220528398054962,0,0.322928853391811,0.241251699712623,0.119372344003136,0.164140899745061,0.291480836629851,6.30446026835733,0,0,0,0,0.136694227721025,0.228778173206523,0,0,0,0,0.474503990371703,0.406638934253697,0.216010681643603,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0,0,0.56369293868419,0.299033092087958,1.32366792365678,1.16670713006429,1.42075805825504,0.506868376472335,0.704143431874524,0.651021924219751,0.104859344425711,0.241584120826006,0,0,0.202725215290164,0.308132871494482,0.129920822977795,0,0,0.240390899039938,0.147689527174577,0.100966449948148,0,0,0.0974578807397524,0,0,0,0.665957860122194,2.06341870201794,0.671538465456314,0,1.12609485270709,0.183151624267265,0,0,1.6942555278512,0.460325236507177,1.71868654031819,1.20297227640581,0.685082519770642,0.755393897389701,0.675022500231806,1.80128481289688,3.62513927187364,1.03552062350364,0.726511433089237,0,0.341467211508268,0.243106717068294,0.419226325255965,0.367687016900028,0.666740183404846,0.206035057238894,0.320919209591815,0,0.25347929989024,0,0.280924522409647,0.192075457214608,0.402048282689293,0,0.579421629724277,0.192909220463705,0,0.441596760403192,0,0.177475806159338,0,0.290692833264657,0.376437521661322,0.0846146078916765,0,0,0,1.12228454331548,0.949080144993393,0.197008964751127,0.409231043169689,0.154936841185966,0,0,0.233931608445408,0.644613162144895,0.382576664137687,0.661774257358546,0.463735671240843
|short_description=p5@Limk1
}}
}}

Latest revision as of 23:47, 1 October 2015

Short description:p5@Limk1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Limk1_5end
Coexpression cluster:MCL_coexpression_mm9:1322
Association with transcript: 10bp_to_ENSMUST00000132027_5end
EntrezGene:Limk1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Limk1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.31
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.26
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.10
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C28.35
medulla oblongata, neonate N30.CNhs11200.1396-42A35.98
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I74.46
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C96.30
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I51.42
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.06
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system5.58e-2373
nervous system3.59e-2275
regional part of nervous system7.85e-1954
neurectoderm2.29e-1664
neural plate2.29e-1664
presumptive neural plate2.29e-1664
neural tube4.24e-1652
neural rod4.24e-1652
future spinal cord4.24e-1652
neural keel4.24e-1652
ectoderm-derived structure5.88e-1695
ectoderm5.88e-1695
presumptive ectoderm5.88e-1695
spinal cord4.27e-146
dorsal region element4.27e-146
dorsum4.27e-146
ecto-epithelium1.36e-1373
gray matter2.93e-1334
posterior neural tube6.42e-1212
chordal neural plate6.42e-1212
regional part of spinal cord7.71e-125
gray matter of spinal cord7.71e-125
structure with developmental contribution from neural crest1.62e-1092
regional part of midbrain1.61e-094
midbrain1.61e-094
presumptive midbrain1.61e-094
midbrain neural tube1.61e-094
regional part of brain8.92e-0946
brain1.64e-0847
future brain1.64e-0847
raphe nuclei8.08e-083
reticular formation8.08e-083
anterior neural tube1.23e-0740
substantia nigra1.74e-073
telencephalic nucleus1.74e-073
midbrain nucleus1.74e-073
neural nucleus1.74e-073
nucleus of brain1.74e-073
ventral horn of spinal cord2.13e-073
occipital lobe2.85e-0710
visual cortex2.85e-0710
neocortex2.85e-0710
neural crest-derived structure4.26e-073
neural crest4.26e-073
enteric nervous system4.26e-073
vagal neural crest4.26e-073
neural fold4.26e-073
brain grey matter6.11e-0729
regional part of telencephalon6.11e-0729
telencephalon6.11e-0729
basal ganglion9.55e-078
nuclear complex of neuraxis9.55e-078
aggregate regional part of brain9.55e-078
collection of basal ganglia9.55e-078
cerebral subcortex9.55e-078
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