FFCP PHASE1:Mm9::chr5:122660365..122660376,+: Difference between revisions
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|id=chr5:122660365..122660376,+
|short_description=p7@Hvcn1
|description=CAGE_peak_7_at_Hvcn1_5end
|association_with_transcript=58bp_to_NM_028752,uc008zkw.1_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=74096 | |EntrezGene=74096 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=Q3U2S8 | |UniProt=Q3U2S8 | ||
|association_with_transcript=58bp_to_NM_028752,uc008zkw.1_5end | |||
|cluster_id=chr5:122660365..122660376,+ | |||
|description=CAGE_peak_7_at_Hvcn1_5end | |||
|id=chr5:122660365..122660376,+ | |||
|ontology_enrichment_celltype=CL:0000553!1.23e-13!6;CL:0000556!1.23e-13!6;CL:0000050!9.15e-09!9;CL:0002027!2.02e-07!3;CL:0002006!2.02e-07!3;CL:0002024!2.02e-07!3;CL:0000414!5.37e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.25e-33,6;CL:0000556,1.25e-33,6;CL:0000050,1.69e-22,9;CL:0000839,1.27e-15,13;CL:0000763,1.04e-12,16;CL:0002031,1.43e-11,25;CL:0002027,1.97e-11,3;CL:0002006,1.97e-11,3;CL:0002024,1.97e-11,3;CL:0000049,1.03e-10,19;CL:0000945,9.82e-10,1;CL:0000236,9.82e-10,1;CL:0000826,9.82e-10,1;CL:0000988,5.39e-09,32;CL:0002032,5.39e-09,32;CL:0000037,5.39e-09,32;CL:0000837,5.39e-09,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007823!2.98e-10!5;UBERON:0002193!8.98e-10!48;UBERON:0003887!1.05e-09!10;UBERON:0001474!1.16e-09!22;UBERON:0004765!1.16e-09!22;UBERON:0001434!1.16e-09!22;UBERON:0002106!7.46e-09!6;UBERON:0004457!7.46e-09!6;UBERON:0000042!7.46e-09!6;UBERON:0004854!7.46e-09!6;UBERON:0009034!7.46e-09!6;UBERON:0002095!7.46e-09!6;UBERON:0004782!7.46e-09!6;UBERON:0003281!7.46e-09!6;UBERON:0009664!7.46e-09!6;UBERON:0002296!7.46e-09!6;UBERON:0005602!7.46e-09!6;UBERON:0001179!7.46e-09!6;UBERON:0006293!7.46e-09!6;UBERON:0002204!1.72e-08!32;UBERON:0002529!1.82e-08!6;UBERON:0000981!3.10e-08!4;UBERON:0002495!3.10e-08!4;UBERON:0003608!3.10e-08!4;UBERON:0003826!3.10e-08!4;UBERON:0008202!3.10e-08!4;UBERON:0004375!3.10e-08!4;UBERON:0002428!3.10e-08!4;UBERON:0003464!3.10e-08!4;UBERON:0003606!3.10e-08!4;UBERON:0009749!3.10e-08!4;UBERON:0003860!3.10e-08!4;UBERON:0005856!3.10e-08!4;UBERON:0005866!3.10e-08!4;UBERON:0007828!3.10e-08!4;UBERON:0005254!3.10e-08!4;UBERON:0001271!3.10e-08!4;UBERON:0002091!3.10e-08!4;UBERON:0001464!3.10e-08!4;UBERON:0003285!3.10e-08!4;UBERON:0010129!3.10e-08!4;UBERON:0006234!3.10e-08!4;UBERON:0005153!1.25e-07!17;UBERON:0002465!5.16e-07!3;UBERON:0002390!6.24e-07!45;UBERON:0003061!6.24e-07!45;UBERON:0003081!8.24e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.46e-13,48;UBERON:0002405,6.46e-13,48;UBERON:0003887,8.33e-13,10;UBERON:0002371,1.04e-12,16;UBERON:0002106,2.07e-12,6;UBERON:0004457,2.07e-12,6;UBERON:0000042,2.07e-12,6;UBERON:0004854,2.07e-12,6;UBERON:0009034,2.07e-12,6;UBERON:0002095,2.07e-12,6;UBERON:0004782,2.07e-12,6;UBERON:0003281,2.07e-12,6;UBERON:0009664,2.07e-12,6;UBERON:0002296,2.07e-12,6;UBERON:0005602,2.07e-12,6;UBERON:0001179,2.07e-12,6;UBERON:0006293,2.07e-12,6;UBERON:0002390,6.95e-11,45;UBERON:0003061,6.95e-11,45;UBERON:0000029,2.09e-09,1;UBERON:0001097,2.09e-09,1;UBERON:0003968,2.09e-09,1;UBERON:0001467,2.09e-09,1;UBERON:0001474,2.95e-09,22;UBERON:0004765,2.95e-09,22;UBERON:0001434,2.95e-09,22;UBERON:0003081,9.25e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999329285446988,2.22722794128809,1.39912375625629,9.14840279538889,7.95263714913285,10.6097412949508,0,0,0,0.47997726838022,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,13.0870432725034,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,2.84831672011889,0,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0.884610551949874,0.161766849947409,0.441683036920787,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.497627882440372,1.0108910337347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0.318909537314974,0.655453258862952,0.345369963731791,0.433947175744535,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0.119372344003136,0,0,0,1.02522528478712,0,0.185194527369712,0.565105371014073,2.46049609897845,1.83022538565218,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999329285446988,2.22722794128809,1.39912375625629,9.14840279538889,7.95263714913285,10.6097412949508,0,0,0,0.47997726838022,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,13.0870432725034,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,2.84831672011889,0,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0.884610551949874,0.161766849947409,0.441683036920787,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.497627882440372,1.0108910337347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0.318909537314974,0.655453258862952,0.345369963731791,0.433947175744535,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0.119372344003136,0,0,0,1.02522528478712,0,0.185194527369712,0.565105371014073,2.46049609897845,1.83022538565218,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@Hvcn1 | |||
}} | }} |
Latest revision as of 19:56, 1 October 2015
Short description: | p7@Hvcn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Hvcn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | 58bp_to_NM_028752, uc008zkw.1_5end |
EntrezGene: | Hvcn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.25e-33 | 6 |
megakaryocyte | 1.25e-33 | 6 |
megakaryocyte-erythroid progenitor cell | 1.69e-22 | 9 |
myeloid lineage restricted progenitor cell | 1.27e-15 | 13 |
myeloid cell | 1.04e-12 | 16 |
hematopoietic lineage restricted progenitor cell | 1.43e-11 | 25 |
CD9-positive, CD41-positive megakaryocyte cell | 1.97e-11 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.97e-11 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.97e-11 | 3 |
common myeloid progenitor | 1.03e-10 | 19 |
lymphocyte of B lineage | 9.82e-10 | 1 |
B cell | 9.82e-10 | 1 |
pro-B cell | 9.82e-10 | 1 |
hematopoietic cell | 5.39e-09 | 32 |
hematopoietic oligopotent progenitor cell | 5.39e-09 | 32 |
hematopoietic stem cell | 5.39e-09 | 32 |
hematopoietic multipotent progenitor cell | 5.39e-09 | 32 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 6.46e-13 | 48 |
immune system | 6.46e-13 | 48 |
intraembryonic coelom | 8.33e-13 | 10 |
bone marrow | 1.04e-12 | 16 |
spleen | 2.07e-12 | 6 |
cavity lining | 2.07e-12 | 6 |
serous membrane | 2.07e-12 | 6 |
gastrointestinal system mesentery | 2.07e-12 | 6 |
stomach region | 2.07e-12 | 6 |
mesentery | 2.07e-12 | 6 |
gastrointestinal system serosa | 2.07e-12 | 6 |
mesentery of stomach | 2.07e-12 | 6 |
gut mesentery | 2.07e-12 | 6 |
dorsal mesentery | 2.07e-12 | 6 |
dorsal mesogastrium | 2.07e-12 | 6 |
peritoneal cavity | 2.07e-12 | 6 |
spleen primordium | 2.07e-12 | 6 |
hematopoietic system | 6.95e-11 | 45 |
blood island | 6.95e-11 | 45 |
lymph node | 2.09e-09 | 1 |
axillary lymph node | 2.09e-09 | 1 |
peripheral lymph node | 2.09e-09 | 1 |
shoulder | 2.09e-09 | 1 |
bone element | 2.95e-09 | 22 |
skeletal element | 2.95e-09 | 22 |
skeletal system | 2.95e-09 | 22 |
lateral plate mesoderm | 9.25e-07 | 87 |