Personal tools

FFCP PHASE1:Mm9::chr4:98590350..98590367,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr4:98590350..98590367,+ |short_description=p6@Usp1 |description=CAGE_peak_6_at_Usp1_5end |association_with_transcript=-133bp_to_ENSMUST00000030289,NM_146144,u...")
 
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr4:98590350..98590367,+
|DHSsupport=NA
|short_description=p6@Usp1
|DPIdataset=NA
|description=CAGE_peak_6_at_Usp1_5end
|association_with_transcript=-133bp_to_ENSMUST00000030289,NM_146144,uc008tum.1,uc008tun.1_5end
|EntrezGene=230484
|EntrezGene=230484
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q8BJQ2
|UniProt=Q8BJQ2
|association_with_transcript=-133bp_to_ENSMUST00000030289,NM_146144,uc008tum.1,uc008tun.1_5end
|cluster_id=chr4:98590350..98590367,+
|description=CAGE_peak_6_at_Usp1_5end
|id=chr4:98590350..98590367,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!5.73e-10!130;UBERON:0000925!5.73e-10!130;UBERON:0006595!5.73e-10!130;UBERON:0004921!2.73e-09!126;UBERON:0004185!2.73e-09!126;UBERON:0001007!4.45e-09!128;UBERON:0001555!4.45e-09!128;UBERON:0007026!4.45e-09!128;UBERON:0005057!1.22e-08!51;UBERON:0003929!6.76e-08!55;UBERON:0005911!3.55e-07!69;UBERON:0004177!6.47e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.41e-10,118;UBERON:0000925,2.41e-10,118;UBERON:0006595,2.41e-10,118;UBERON:0004921,5.30e-10,114;UBERON:0001007,2.31e-09,116;UBERON:0001555,2.31e-09,116;UBERON:0007026,2.31e-09,116;UBERON:0003929,3.11e-09,55;UBERON:0004177,2.86e-08,29;UBERON:0005057,2.86e-08,29;UBERON:0000077,4.46e-08,35;UBERON:0005911,8.21e-08,69;UBERON:0000490,5.20e-07,66
|phase1_expression=0.480446541314382,0.348975407639361,0.454999239389536,2.41971369045464,4.00716583957078,1.34303417529512,1.40167584357315,1.03298658753261,7.03943610758334,4.68129052643987,1.54096171402954,1.99430397488341,1.02720437958723,1.48614684112296,2.33176833270964,1.61980213911861,4.89693314689703,0.946386496074713,0.411343300817216,1.27316895539409,0.680346321208558,1.88652807281682,2.08959831311148,0.95995453676044,0.68822784320151,2.29692785646008,1.7230479846363,1.50829862880122,1.14014051673824,1.76421090831952,1.33038306393183,1.90509202037889,0.61506478758457,0,2.59966457776147,1.82858109894342,2.45003227514843,2.92972141515835,0.7813353445238,0,1.17646297606203,0.683045484958446,0,0,0.405507724878058,0.367093504323363,0,0,0.439372365468944,0.194429899074283,0.139986421625363,0,1.67782606057736,1.45072428402269,4.36921938885203,0,0.573066879877513,2.57836046138721,0,0,0,0.677689064138264,0,0,0,0,0.299600110518405,0,0.518448061542388,0.270011876663381,0.841299845405528,0,0.662605622854841,1.34739879136449,0.575072826109418,0,1.10115880999389,0.255374676170375,0,0.527545150920775,0.182975287204819,0,0,0.56276261003168,0.15279824777681,1.17851434189467,0.996601765593721,1.86399445825301,0.530083353332288,1.88928900266964,1.15945795480671,0,1.3599426674155,0.539703191637817,0.649776417447669,0.448026887097336,0.842666520790511,0.681721290312231,0.779358013808606,0,1.26759077799012,1.28326477414318,0,0,1.08245520505607,1.01343946190039,0.505524445014783,1.37020655662872,0,0.593768556259299,1.21439728736295,0.304465478312141,0.230615497256059,1.50722640552623,1.17588707135705,1.25666591329675,3.21353458054686,1.01219549843938,0.884610551949874,1.7794353494215,2.20841518460394,0.969750506270444,1.86391761218122,0,1.04723353406728,1.53274233125155,1.43778149407104,1.19980546198682,1.14363204365758,0.599162557619291,0,0.125654352112864,0.521472960576829,1.27857728665165,0.20778804455956,0.486723789203273,1.12023300235348,1.49288364732112,0.252722758433675,0.841767423545896,0.910843100738926,0.229902104433473,1.26043490863744,1.35634336052144,1.42876648217788,1.92170580427275,1.03071897015702,0.258703370739016,1.29340795759705,2.08016688184601,0.879755620819744,1.31517439456545,0.278047249225598,1.0447564995665,1.23469281844766,1.19420560091096,0.702213187313235,1.28673953557358,1.13665399758237,1.24275463521301,0.234526059981096,0.36012412292203,0.710234206755631,0.196764231747404,0.462801338662135,1.39520366850245,0.804820204198858,0.350296027101508,0.658239399653922,0.656669856316381,0.648550476366846,0.877199924551994,0.219550115291051,0.536825675041487,0.210289948564127,0.720332286654991,1.98251269790279,2.11560453330835,1.91959425481711,1.16118335930219,3.22168653305233,1.4117846723634,1.77902435075896,2.47293313946327,0.949058123089023,1.15289268306808,1.50801125280162,1.1937388322469,2.33956904542944,2.69645822596266,0.648414149624083,0.995706366271836,1.32767530667157,1.25673363870702,1.1270773567308,0.610953983535943,0.775809948670503,0.841629838683823,0.632365371242573,0.590440591918409,0.470996183524124,1.23397163921801,2.07516838961004,1.83529616287703,3.14494392181125,2.47348323623339,2.84004169943904,3.13530307678142,2.5462585178142,2.30156909960649,2.2698931748505,1.09824565275233,2.87536413054709,0.744281895337007,0.624075346229121,1.26289438973556,1.25578189465339,1.4473305640901,0.554259570499814,1.89491411770485,1.62964976442026,0.678980343100753,1.17345124144251,1.00503754465089,0.476087281772027,0.585400943573396,1.89162172927429,1.99318220683897,0.797273843287435,0.655453258862952,1.03610989119537,1.01254341007058,0,1.08781136763742,4.91764273019036,1.37968373152366,0.160550589987792,0.35163505977661,2.78689407140348,1.26235463602186,2.52406575533005,3.12350995437311,4.09304455692318,0.955875191810208,1.55959071857676,3.11384183867716,5.66734982344852,1.75353514746787,3.95287777946523,0.321321316421807,1.56134093729095,0.712262414669021,1.79175655288934,1.15479086080775,2.65490276679926,0.485561272309963,0.302323556964751,0.565815239267694,0.295301892880773,0.614870295887855,1.29214146584111,1.09060118843252,0.356497378384721,0.948110273807448,1.05418608574999,1.03135543248187,0.340439605753788,0.900305470156551,0.388076051348264,0.857348140126369,0.354680467284547,0.178368817602071,0.822745103010605,0.608929898229199,10.560226862867,3.60114520468494,0.441056796109924,0.65954501176592,1.13025098687134,1.26657142349127,0.835606408021955,1.14898629821543,0.874442509889552,0.741701208042039,2.39219233116994,1.23832120777933,1.48155621895769,1.88368457004691,2.32380187125743,1.83022538565218,0.339956859987711,0.559805809294632,0.967399816630967,0.954670618015114,0.949007980743406,0.813277868507395,1.29606408986162,0.836353184057875,1.31017538247707,0.539457385539283,0.661227645802687,1.30877970992015,1.16653475962614,1.24267862617385,0,2.0932316446157,0.992750942742586,1.16670713006429,1.80823752868824,1.18269287843545,1.76035857968631,1.43224823328345,1.15345278868282,0.483168241652012,0.288030006257865,2.52808896502543,1.62180172232131,1.1298205288131,2.07873316764472,2.50637373934474,1.58945083825012,2.88469078847925,2.21534290761866,2.1202954489111,1.447929326445,1.71404514732629,1.94915761479505,1.53938946624527,1.5193997283604,0.453460767230423,3.7737612073591,3.13998498133165,2.51826924546118,0.386379188064381,3.75364950902364,1.09890974560359,1.07184189539533,0,0,0.460325236507177,0,0.343706364687375,0,0,0,0,0.453142408984205,0.51776031175182,2.69847103718859,0.798049746802062,1.02440163452481,1.45864030240976,0.209613162627982,1.2869045591501,0.44449345560323,0.824140228955577,1.28367683836726,1.01078884705519,1.52087579934144,0.377252682772152,0.468207537349412,0.512201219238954,0.918967503289812,1.42888107384922,0.347652977834566,1.15745532278223,0.824171801606613,1.17759136107518,1.02860775715625,0.887379030796687,0.238436189947321,0.581385666529314,1.69396884747595,1.60767754994185,0.548783918618318,1.8414879800649,0.814824683075171,0.561142271657738,1.18635018124174,0.689531376628944,1.22769312950907,1.54936841185966,0.578719832943424,0.499621155875892,1.40358965067245,1.71896843238639,0.57386499620653,0.220591419119515,0.927471342481686
|phase1_expression=0.480446541314382,0.348975407639361,0.454999239389536,2.41971369045464,4.00716583957078,1.34303417529512,1.40167584357315,1.03298658753261,7.03943610758334,4.68129052643987,1.54096171402954,1.99430397488341,1.02720437958723,1.48614684112296,2.33176833270964,1.61980213911861,4.89693314689703,0.946386496074713,0.411343300817216,1.27316895539409,0.680346321208558,1.88652807281682,2.08959831311148,0.95995453676044,0.68822784320151,2.29692785646008,1.7230479846363,1.50829862880122,1.14014051673824,1.76421090831952,1.33038306393183,1.90509202037889,0.61506478758457,0,2.59966457776147,1.82858109894342,2.45003227514843,2.92972141515835,0.7813353445238,0,1.17646297606203,0.683045484958446,0,0,0.405507724878058,0.367093504323363,0,0,0.439372365468944,0.194429899074283,0.139986421625363,0,1.67782606057736,1.45072428402269,4.36921938885203,0,0.573066879877513,2.57836046138721,0,0,0,0.677689064138264,0,0,0,0,0.299600110518405,0,0.518448061542388,0.270011876663381,0.841299845405528,0,0.662605622854841,1.34739879136449,0.575072826109418,0,1.10115880999389,0.255374676170375,0,0.527545150920775,0.182975287204819,0,0,0.56276261003168,0.15279824777681,1.17851434189467,0.996601765593721,1.86399445825301,0.530083353332288,1.88928900266964,1.15945795480671,0,1.3599426674155,0.539703191637817,0.649776417447669,0.448026887097336,0.842666520790511,0.681721290312231,0.779358013808606,0,1.26759077799012,1.28326477414318,0,0,1.08245520505607,1.01343946190039,0.505524445014783,1.37020655662872,0,0.593768556259299,1.21439728736295,0.304465478312141,0.230615497256059,1.50722640552623,1.17588707135705,1.25666591329675,3.21353458054686,1.01219549843938,0.884610551949874,1.7794353494215,2.20841518460394,0.969750506270444,1.86391761218122,0,1.04723353406728,1.53274233125155,1.43778149407104,1.19980546198682,1.14363204365758,0.599162557619291,0,0.125654352112864,0.521472960576829,1.27857728665165,0.20778804455956,0.486723789203273,1.12023300235348,1.49288364732112,0.252722758433675,0.841767423545896,0.910843100738926,0.229902104433473,1.26043490863744,1.35634336052144,1.42876648217788,1.92170580427275,1.03071897015702,0.258703370739016,1.29340795759705,2.08016688184601,0.879755620819744,1.31517439456545,0.278047249225598,1.0447564995665,1.23469281844766,1.19420560091096,0.702213187313235,1.28673953557358,1.13665399758237,1.24275463521301,0.234526059981096,0.36012412292203,0.710234206755631,0.196764231747404,0.462801338662135,1.39520366850245,0.804820204198858,0.350296027101508,0.658239399653922,0.656669856316381,0.648550476366846,0.877199924551994,0.219550115291051,0.536825675041487,0.210289948564127,0.720332286654991,1.98251269790279,2.11560453330835,1.91959425481711,1.16118335930219,3.22168653305233,1.4117846723634,1.77902435075896,2.47293313946327,0.949058123089023,1.15289268306808,1.50801125280162,1.1937388322469,2.33956904542944,2.69645822596266,0.648414149624083,0.995706366271836,1.32767530667157,1.25673363870702,1.1270773567308,0.610953983535943,0.775809948670503,0.841629838683823,0.632365371242573,0.590440591918409,0.470996183524124,1.23397163921801,2.07516838961004,1.83529616287703,3.14494392181125,2.47348323623339,2.84004169943904,3.13530307678142,2.5462585178142,2.30156909960649,2.2698931748505,1.09824565275233,2.87536413054709,0.744281895337007,0.624075346229121,1.26289438973556,1.25578189465339,1.4473305640901,0.554259570499814,1.89491411770485,1.62964976442026,0.678980343100753,1.17345124144251,1.00503754465089,0.476087281772027,0.585400943573396,1.89162172927429,1.99318220683897,0.797273843287435,0.655453258862952,1.03610989119537,1.01254341007058,0,1.08781136763742,4.91764273019036,1.37968373152366,0.160550589987792,0.35163505977661,2.78689407140348,1.26235463602186,2.52406575533005,3.12350995437311,4.09304455692318,0.955875191810208,1.55959071857676,3.11384183867716,5.66734982344852,1.75353514746787,3.95287777946523,0.321321316421807,1.56134093729095,0.712262414669021,1.79175655288934,1.15479086080775,2.65490276679926,0.485561272309963,0.302323556964751,0.565815239267694,0.295301892880773,0.614870295887855,1.29214146584111,1.09060118843252,0.356497378384721,0.948110273807448,1.05418608574999,1.03135543248187,0.340439605753788,0.900305470156551,0.388076051348264,0.857348140126369,0.354680467284547,0.178368817602071,0.822745103010605,0.608929898229199,10.560226862867,3.60114520468494,0.441056796109924,0.65954501176592,1.13025098687134,1.26657142349127,0.835606408021955,1.14898629821543,0.874442509889552,0.741701208042039,2.39219233116994,1.23832120777933,1.48155621895769,1.88368457004691,2.32380187125743,1.83022538565218,0.339956859987711,0.559805809294632,0.967399816630967,0.954670618015114,0.949007980743406,0.813277868507395,1.29606408986162,0.836353184057875,1.31017538247707,0.539457385539283,0.661227645802687,1.30877970992015,1.16653475962614,1.24267862617385,0,2.0932316446157,0.992750942742586,1.16670713006429,1.80823752868824,1.18269287843545,1.76035857968631,1.43224823328345,1.15345278868282,0.483168241652012,0.288030006257865,2.52808896502543,1.62180172232131,1.1298205288131,2.07873316764472,2.50637373934474,1.58945083825012,2.88469078847925,2.21534290761866,2.1202954489111,1.447929326445,1.71404514732629,1.94915761479505,1.53938946624527,1.5193997283604,0.453460767230423,3.7737612073591,3.13998498133165,2.51826924546118,0.386379188064381,3.75364950902364,1.09890974560359,1.07184189539533,0,0,0.460325236507177,0,0.343706364687375,0,0,0,0,0.453142408984205,0.51776031175182,2.69847103718859,0.798049746802062,1.02440163452481,1.45864030240976,0.209613162627982,1.2869045591501,0.44449345560323,0.824140228955577,1.28367683836726,1.01078884705519,1.52087579934144,0.377252682772152,0.468207537349412,0.512201219238954,0.918967503289812,1.42888107384922,0.347652977834566,1.15745532278223,0.824171801606613,1.17759136107518,1.02860775715625,0.887379030796687,0.238436189947321,0.581385666529314,1.69396884747595,1.60767754994185,0.548783918618318,1.8414879800649,0.814824683075171,0.561142271657738,1.18635018124174,0.689531376628944,1.22769312950907,1.54936841185966,0.578719832943424,0.499621155875892,1.40358965067245,1.71896843238639,0.57386499620653,0.220591419119515,0.927471342481686
|short_description=p6@Usp1
}}
}}

Latest revision as of 07:59, 27 September 2015

Short description:p6@Usp1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Usp1_5end
Coexpression cluster:NA
Association with transcript: -133bp_to_ENSMUST00000030289, NM_146144, uc008tum.1, uc008tun.1_5end
EntrezGene:Usp1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Usp1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.42
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.03
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E77.04
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.54
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.99
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.03
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.49
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.62
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.90
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.95
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.09
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I21.51
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C11.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.60
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.45
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.93
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.37
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F91.89
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I31.26
amnion, adult pregnant day17.5.CNhs10488.583-22A83.21
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.78
bone (os femoris), neonate N16.CNhs11225.1525-43A62.21
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.44
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.14
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.49
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C61.43
eyeball, neonate N01.CNhs11140.1532-43E71.92
eyeball, neonate N02.CNhs11205.1551-44G81.03
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H22.08
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.65
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I31.98
intestine, adult.CNhs10496.178-9A32.12
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D83.22
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F72.47
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A52.34
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F81.26
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.84
kidney, neonate N10.CNhs11206.758-6D50.63
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H11.23
liver, adult pregnant day01.CNhs10466.508-5B22.08
liver, embryo E12.CNhs10601.355-15F81.84
liver, embryo E13.CNhs10524.378-3H63.14
liver, embryo E14.CNhs10594.409-16E12.47
liver, embryo E15.CNhs10520.433-16D72.84
liver, embryo E16.CNhs10523.462-17F53.14
liver, embryo E17.CNhs10510.481-18A32.55
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F42.27
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H11.26
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F81.63
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E51.89
lung, neonate N07.CNhs11111.715-19A31.99
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B64.92
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.79
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.09
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.11
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.67
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I71.56
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I41.79
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I710.56
placenta, adult pregnant day17.CNhs10464.577-18G33.60
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H31.27
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G22.39
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F21.48
spleen, neonate N10.CNhs11116.752-24D11.88
spleen, neonate N20.CNhs11112.824-19H12.32
spleen, neonate N25.CNhs11099.1354-25G31.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.97
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I11.17
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F52.09
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I51.81
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B71.76
testis, neonate N07.CNhs11222.726-26I41.43
testis, neonate N10.CNhs11204.763-44D91.15
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B52.53
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I21.13
thymus, embryo E16.CNhs11002.456-26C52.08
thymus, embryo E17.CNhs10581.478-18C12.51
thymus, embryo E18.CNhs10595.1273-19G41.59
thymus, neonate N02.CNhs11181.1541-43F82.88
thymus, neonate N03.CNhs11137.2104-43C72.22
thymus, neonate N06.CNhs11197.681-26C42.12
thymus, neonate N07.CNhs11211.713-19D31.45
thymus, neonate N10.CNhs11194.748-24E41.71
thymus, neonate N20.CNhs11186.820-7A21.95
thymus, neonate N25.CNhs11125.1362-25G71.54
thymus, neonate N30.CNhs11132.1393-42G21.52
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.77
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.14
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.52
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F53.75
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I82.70
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endoderm-derived structure2.41e-10118
endoderm2.41e-10118
presumptive endoderm2.41e-10118
subdivision of digestive tract5.30e-10114
digestive system2.31e-09116
digestive tract2.31e-09116
primitive gut2.31e-09116
gut epithelium3.11e-0955
hemopoietic organ2.86e-0829
immune organ2.86e-0829
mixed endoderm/mesoderm-derived structure4.46e-0835
endo-epithelium8.21e-0869
unilaminar epithelium5.20e-0766
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:98590350..98590367,%2B&oldid=4300553"