FFCP PHASE1:Mm9::chr4:150061238..150061243,-: Difference between revisions
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|id=chr4:150061238..150061243,-
|short_description=p@chr4:150061238..150061243,-
|description=CAGE_peak_at_chr4:150061238..150061243,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=73 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:150061238..150061243,- | |||
|description=CAGE_peak_at_chr4:150061238..150061243,- | |||
|id=chr4:150061238..150061243,- | |||
|ontology_enrichment_celltype=CL:0000066!1.11e-14!25;CL:0000223!1.01e-13!20;CL:0002563!7.04e-13!9;CL:0002251!7.04e-13!9;CL:0000239!4.29e-10!6;CL:0000677!4.29e-10!6;CL:0000212!4.29e-10!6;CL:0000584!4.29e-10!6;CL:0000181!2.73e-09!5;CL:0000417!2.73e-09!5;CL:0000668!2.73e-09!5;CL:0000412!2.73e-09!5;CL:0000182!2.73e-09!5;CL:0000075!1.34e-08!7;CL:0002076!2.69e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,4.17e-23,20;CL:0000066,1.65e-22,25;CL:0000182,3.00e-20,5;CL:0002563,6.80e-16,9;CL:0002251,6.80e-16,9;CL:0002076,1.59e-09,15;CL:0000239,4.52e-09,6;CL:0000677,4.52e-09,6;CL:0000584,4.52e-09,6;CL:0002250,9.29e-09,3;CL:0000075,7.51e-08,7;CL:0000057,2.79e-07,1;CL:0000632,2.79e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.07e-17!15;UBERON:0001242!4.52e-14!13;UBERON:0000060!4.52e-14!13;UBERON:0001262!4.52e-14!13;UBERON:0004786!4.52e-14!13;UBERON:0000160!4.78e-14!43;UBERON:0003350!7.04e-13!9;UBERON:0004808!7.04e-13!9;UBERON:0001277!7.04e-13!9;UBERON:0000485!2.43e-10!11;UBERON:0004923!3.45e-10!24;UBERON:0005409!4.02e-09!59;UBERON:0001007!6.13e-09!128;UBERON:0001555!6.13e-09!128;UBERON:0007026!6.13e-09!128;UBERON:0004119!1.05e-08!130;UBERON:0000925!1.05e-08!130;UBERON:0006595!1.05e-08!130;UBERON:0004921!1.78e-07!126;UBERON:0004185!1.78e-07!126;UBERON:0003929!3.56e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,6.80e-16,9;UBERON:0004808,6.80e-16,9;UBERON:0001277,6.80e-16,9;UBERON:0000485,5.27e-13,11;UBERON:0003929,9.48e-12,55;UBERON:0001242,5.34e-11,13;UBERON:0001262,5.34e-11,13;UBERON:0004786,5.34e-11,13;UBERON:0002107,1.13e-09,22;UBERON:0007499,1.13e-09,22;UBERON:0006925,1.13e-09,22;UBERON:0009497,1.13e-09,22;UBERON:0000015,1.13e-09,22;UBERON:0002423,1.13e-09,22;UBERON:0006235,1.13e-09,22;UBERON:0008835,1.13e-09,22;UBERON:0003894,1.13e-09,22;UBERON:0004161,1.13e-09,22;UBERON:0008836,1.13e-09,22;UBERON:0000490,1.47e-09,66;UBERON:0000344,1.59e-09,15;UBERON:0009854,3.10e-09,23;UBERON:0009856,3.10e-09,23;UBERON:0005911,4.40e-09,69;UBERON:0002365,1.83e-08,25;UBERON:0002330,1.83e-08,25 | |||
|phase1_expression=0,1.04692622291808,0.454999239389536,1.20985684522732,1.50268718983904,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0.47997726838022,0.22940928106717,0,1.29228598847722,0.215471232685889,0,0.504060259519861,0.886922042621219,0,0,0,1.44425809875637,0,3.26670970019791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58127163094416,10.879541339324,14.0322829825832,5.19821133958135,9.85659151614138,1.96622188184453,0,0,0,0,0,0,0,0,0,0,3.65388415100992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0.22237804384487,0.570676878337677,0,0,0.251335208800269,0.397912944082302,0.19496408711912,0,0,0.398282546508734,0,0,0,0,0,0,0.189709611372772,0.147610147979602,0.627994911365499,0.246794327843601,0.889357881261447,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,1.4473305640901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,1.04692622291808,0.454999239389536,1.20985684522732,1.50268718983904,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0.47997726838022,0.22940928106717,0,1.29228598847722,0.215471232685889,0,0.504060259519861,0.886922042621219,0,0,0,1.44425809875637,0,3.26670970019791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58127163094416,10.879541339324,14.0322829825832,5.19821133958135,9.85659151614138,1.96622188184453,0,0,0,0,0,0,0,0,0,0,3.65388415100992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0.22237804384487,0.570676878337677,0,0,0.251335208800269,0.397912944082302,0.19496408711912,0,0,0.398282546508734,0,0,0,0,0,0,0.189709611372772,0.147610147979602,0.627994911365499,0.246794327843601,0.889357881261447,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,1.4473305640901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr4:150061238..150061243,- | |||
}} | }} |
Latest revision as of 05:32, 5 August 2015
Short description: | p@chr4:150061238..150061243, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:150061238..150061243, - |
Coexpression cluster: | MCL_coexpression_mm9:73 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 4.17e-23 | 20 |
epithelial cell | 1.65e-22 | 25 |
hepatocyte | 3.00e-20 | 5 |
intestinal epithelial cell | 6.80e-16 | 9 |
epithelial cell of alimentary canal | 6.80e-16 | 9 |
endo-epithelial cell | 1.59e-09 | 15 |
brush border epithelial cell | 4.52e-09 | 6 |
gut absorptive cell | 4.52e-09 | 6 |
enterocyte | 4.52e-09 | 6 |
intestinal crypt stem cell | 9.29e-09 | 3 |
columnar/cuboidal epithelial cell | 7.51e-08 | 7 |
fibroblast | 2.79e-07 | 1 |
hepatic stellate cell | 2.79e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 6.80e-16 | 9 |
gastrointestinal system epithelium | 6.80e-16 | 9 |
intestinal epithelium | 6.80e-16 | 9 |
simple columnar epithelium | 5.27e-13 | 11 |
gut epithelium | 9.48e-12 | 55 |
intestinal mucosa | 5.34e-11 | 13 |
wall of intestine | 5.34e-11 | 13 |
gastrointestinal system mucosa | 5.34e-11 | 13 |
liver | 1.13e-09 | 22 |
epithelial sac | 1.13e-09 | 22 |
digestive gland | 1.13e-09 | 22 |
epithelium of foregut-midgut junction | 1.13e-09 | 22 |
anatomical boundary | 1.13e-09 | 22 |
hepatobiliary system | 1.13e-09 | 22 |
foregut-midgut junction | 1.13e-09 | 22 |
hepatic diverticulum | 1.13e-09 | 22 |
liver primordium | 1.13e-09 | 22 |
septum transversum | 1.13e-09 | 22 |
liver bud | 1.13e-09 | 22 |
unilaminar epithelium | 1.47e-09 | 66 |
mucosa | 1.59e-09 | 15 |
digestive tract diverticulum | 3.10e-09 | 23 |
sac | 3.10e-09 | 23 |
endo-epithelium | 4.40e-09 | 69 |
exocrine gland | 1.83e-08 | 25 |
exocrine system | 1.83e-08 | 25 |