FFCP PHASE1:Mm9::chr4:129419519..129419556,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:129419519..129419556,-
|short_description=p1@Khdrbs1
|description=CAGE_peak_1_at_Khdrbs1_5end
|association_with_transcript=0bp_to_ENSMUST00000066257,ENSMUS...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=20218 | |EntrezGene=20218 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=108 | |||
|TSSclassifier=NA | |||
|UniProt=Q60749 | |UniProt=Q60749 | ||
|association_with_transcript=0bp_to_ENSMUST00000066257,ENSMUST00000129342,ENSMUST00000139281,NM_011317,NR_045036,uc008uyc.1,uc008uyd.1,uc008uye.1_5end | |||
|cluster_id=chr4:129419519..129419556,- | |||
|description=CAGE_peak_1_at_Khdrbs1_5end | |||
|id=chr4:129419519..129419556,- | |||
|ontology_enrichment_celltype=CL:0000540!9.38e-15!33;CL:0000047!9.38e-15!33;CL:0000031!9.38e-15!33;CL:0000404!9.38e-15!33;CL:0000393!6.52e-11!39;CL:0000211!6.52e-11!39;CL:0000221!1.04e-09!44;CL:0000133!1.04e-09!44;CL:0002319!1.35e-09!43;CL:0000117!1.92e-09!23;CL:0000337!1.92e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,9.38e-15,33;CL:0000047,9.38e-15,33;CL:0000031,9.38e-15,33;CL:0000404,9.38e-15,33;CL:0000393,6.52e-11,39;CL:0000211,6.52e-11,39;CL:0000221,1.04e-09,44;CL:0000133,1.04e-09,44;CL:0002319,1.35e-09,43;CL:0000117,1.92e-09,23;CL:0000337,1.92e-09,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!6.15e-10!94;UBERON:0001017!5.12e-09!73;UBERON:0005743!5.12e-09!73;UBERON:0000073!1.12e-08!75;UBERON:0001016!1.12e-08!75;UBERON:0007811!3.50e-08!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.12e-09,73;UBERON:0001016,1.12e-08,75;UBERON:0000153,2.71e-07,43;UBERON:0004121,6.84e-07,95;UBERON:0000924,6.84e-07,95;UBERON:0006601,6.84e-07,95 | |||
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|phase1_expression=116.58836069229,40.4811472861659,40.0399330662792,31.4562779759103,35.0627010962443,53.7213670118047,60.0384486330501,85.0922701479988,110.378358166907,104.392778739609,76.7056497650262,86.9516533049167,97.9268175206497,84.9726311512655,108.26067259009,66.0069371690833,103.535157962966,113.566379528966,108.731745849351,93.3657233955666,52.9819697641165,112.496647710603,100.300719029351,50.5576056027165,70.199240006554,36.7508457033613,41.7839136274303,46.1108437947803,51.1162998337646,63.0075324399827,67.6278057498679,59.0578526317457,59.6612843957033,126.785344812351,56.6149174712498,60.8418802012082,65.3341940039581,79.1024782092756,71.8828516961896,83.2402752918339,71.1760100517527,64.2062755860939,76.2251254258911,61.5635439900573,64.3743513243917,65.8932840260437,73.5447863687157,96.1490939637769,55.5806042318214,49.385194364868,106.389680435276,64.6886539642372,109.72982436176,120.410115573883,135.445801054413,90.5553214846533,89.3984332608921,67.0373719960675,238.328790892606,250.212733195672,239.588270525336,88.0995783379744,112.940439106115,66.1426292201828,70.2095117422552,63.943210345149,83.2888307241165,64.1644569886996,279.132436334422,269.471852910055,283.09739797896,107.690421120234,122.140303146242,279.40151300931,264.150118126259,289.553917782157,123.329786719315,92.1902580975055,98.7690008837645,241.615679121715,208.500339769892,202.114387776023,92.9679386674599,68.6570384238649,96.7212908427208,127.868806095572,127.849769357594,176.52027519656,77.3921695865141,88.4187253249391,81.1620568364698,49.9045848649204,43.518165357296,37.7792234146472,35.0879265421741,38.5303122903709,45.5039921226876,84.8743006438728,80.2738754222865,81.9747812863989,104.224130634744,111.644035350457,91.7298862943925,106.660005473,80.9676493381941,79.0482780282308,92.0054489926906,37.9090480667279,69.395352817442,58.1893185134113,120.919272755997,81.2922827093417,80.2541930451084,70.68891841918,80.1954982665507,68.3626256833435,63.2819117399997,48.0069864974107,91.1148868508371,93.8247729694973,77.7362144980585,65.458159173255,65.2371164263428,91.9331702616258,61.9962252167827,66.4188343542338,104.478788569162,100.183756075899,95.4297405318716,86.1296176577731,97.9051290031861,194.889900127053,84.1309709730618,78.5046454004115,88.9332830714917,80.9583902708111,133.715084735465,61.8302643932162,56.8626206475768,49.8747198450943,141.440921500459,164.609906774367,133.245976055958,101.725752039108,116.546523046225,113.508756172377,111.130245327838,56.6560381918444,217.076968883372,189.295186247987,171.728297184014,135.243766907814,107.882332699532,116.316223618404,94.454000611246,118.425388757003,71.6257451059499,83.123373998053,94.3422817993368,126.553847019192,105.067674871531,108.21729893807,127.368667744843,92.8727173847746,94.5657401999629,85.3399577233997,98.1880649122606,82.5530970535888,91.6598364018086,75.6812009404629,52.1272445379852,53.655395385097,58.1807805521284,48.1801043349735,73.3911920488804,144.683885005274,45.5977920517641,60.2947291992881,148.448622372523,137.251873069519,132.9912200844,103.261964607151,88.0617053625686,84.4601779939763,67.8576558008652,66.8677756179484,70.1225232552752,71.4253734627731,73.5014608439083,62.9173586057955,46.685818772934,50.1836008601005,157.993361493917,122.1316599798,142.011746948081,107.527901102326,89.8000015586107,99.733135884033,76.0103176233573,53.5824837165956,52.7515725547019,48.1248939295022,33.2026942337607,96.9370064210506,95.3311126299035,89.4951207291718,81.3469086767897,72.8355022452299,60.3463268721965,59.8407965897686,46.8570805379852,55.4614054639925,63.258010872036,48.3783231969054,42.1250858704657,36.3713584243841,33.0091240880318,26.0519501536218,82.2151696241391,172.437184711141,154.979692596367,122.216461758135,114.528841164789,107.371511020204,83.3152743101048,87.4198742402939,95.5268973283517,90.8005227559977,94.8755873512048,63.7428294244221,70.2827876194195,65.2367254202617,70.871903451458,66.9003991097013,43.2752560256752,55.739222753556,76.422080834189,69.3893184625843,157.377547561608,39.8904064982909,157.123093269296,156.956375207249,177.939726527292,173.730316111505,171.554979043443,239.765821578141,142.898177691238,165.124559719891,183.808816745133,114.069067329742,96.2353777712061,126.070447396417,120.210576002939,84.4647029619382,43.8058956521877,117.505827899011,110.650421849099,72.9901658655326,73.8254732201932,76.243916690094,86.8319065045223,79.9774204850512,74.5079520824068,51.513991543538,35.8423269154996,46.4109944616841,71.8327568140493,142.608386472798,122.11459749092,123.88680624826,125.202204951445,120.398951881398,107.285961432583,77.6385620242228,86.3591885674454,78.5896982904773,49.6188895623664,65.4598424177676,85.414681722134,92.8215914644319,88.335534562321,82.5628725717658,56.8387631428209,68.7927870458991,80.9927974981822,97.8273754145675,86.8562333363948,83.2588579960734,92.405297939413,86.9357058184786,103.346885436264,96.986356460295,101.85338069386,59.189578316937,168.765252575536,121.788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| ||
|short_description=p1@Khdrbs1 | |||
}} | }} |
Latest revision as of 09:43, 26 September 2015
Short description: | p1@Khdrbs1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Khdrbs1_5end |
Coexpression cluster: | MCL_coexpression_mm9:108 |
Association with transcript: | 0bp_to_ENSMUST00000066257, ENSMUST00000129342, ENSMUST00000139281, NM_011317, NR_045036, uc008uyc.1, uc008uyd.1, uc008uye.1_5end |
EntrezGene: | Khdrbs1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 9.38e-15 | 33 |
neuronal stem cell | 9.38e-15 | 33 |
neuroblast | 9.38e-15 | 33 |
electrically signaling cell | 9.38e-15 | 33 |
electrically responsive cell | 6.52e-11 | 39 |
electrically active cell | 6.52e-11 | 39 |
ectodermal cell | 1.04e-09 | 44 |
neurectodermal cell | 1.04e-09 | 44 |
neural cell | 1.35e-09 | 43 |
CNS neuron (sensu Vertebrata) | 1.92e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.92e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 5.12e-09 | 73 |
nervous system | 1.12e-08 | 75 |
anterior region of body | 2.71e-07 | 43 |
ectoderm-derived structure | 6.84e-07 | 95 |
ectoderm | 6.84e-07 | 95 |
presumptive ectoderm | 6.84e-07 | 95 |