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FFCP PHASE1:Mm9::chr3:73512321..73512345,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr3:73512321..73512345,-
|DHSsupport=NA
|short_description=p2@Bche
|DPIdataset=NA
|description=CAGE_peak_2_at_Bche_5end
|association_with_transcript=0bp_to_ENSMUST00000029367,NM_009738,uc008pmw.1,uc008pmx.1_5end
|EntrezGene=12038
|EntrezGene=12038
|HGNC=
|HGNC=
|MCL_coexpression_id=3415
|TSSclassifier=NA
|UniProt=Q03311
|UniProt=Q03311
|association_with_transcript=0bp_to_ENSMUST00000029367,NM_009738,uc008pmw.1,uc008pmx.1_5end
|cluster_id=chr3:73512321..73512345,-
|description=CAGE_peak_2_at_Bche_5end
|id=chr3:73512321..73512345,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005409!4.69e-17!59;UBERON:0000160!8.08e-17!43;UBERON:0001007!5.79e-14!128;UBERON:0001555!5.79e-14!128;UBERON:0007026!5.79e-14!128;UBERON:0004119!4.92e-13!130;UBERON:0000925!4.92e-13!130;UBERON:0006595!4.92e-13!130;UBERON:0004921!5.91e-13!126;UBERON:0004185!5.91e-13!126;UBERON:0009854!2.00e-12!23;UBERON:0009856!2.00e-12!23;UBERON:0002107!5.18e-12!22;UBERON:0007499!5.18e-12!22;UBERON:0006925!5.18e-12!22;UBERON:0009497!5.18e-12!22;UBERON:0000015!5.18e-12!22;UBERON:0002423!5.18e-12!22;UBERON:0006235!5.18e-12!22;UBERON:0008835!5.18e-12!22;UBERON:0003894!5.18e-12!22;UBERON:0004161!5.18e-12!22;UBERON:0008836!5.18e-12!22;UBERON:0002365!7.01e-11!25;UBERON:0002330!7.01e-11!25;UBERON:0003914!9.77e-09!47;UBERON:0000466!1.34e-08!79;UBERON:0000344!7.43e-08!15;UBERON:0000468!3.23e-07!333;UBERON:0005256!4.94e-07!47
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.53e-15,31;UBERON:0005409,4.62e-15,47;UBERON:0009854,1.05e-12,23;UBERON:0009856,1.05e-12,23;UBERON:0002107,2.80e-12,22;UBERON:0007499,2.80e-12,22;UBERON:0006925,2.80e-12,22;UBERON:0009497,2.80e-12,22;UBERON:0000015,2.80e-12,22;UBERON:0002423,2.80e-12,22;UBERON:0006235,2.80e-12,22;UBERON:0008835,2.80e-12,22;UBERON:0003894,2.80e-12,22;UBERON:0004161,2.80e-12,22;UBERON:0008836,2.80e-12,22;UBERON:0002365,7.02e-11,25;UBERON:0002330,7.02e-11,25;UBERON:0001007,1.62e-10,116;UBERON:0001555,1.62e-10,116;UBERON:0007026,1.62e-10,116;UBERON:0004119,1.04e-09,118;UBERON:0000925,1.04e-09,118;UBERON:0006595,1.04e-09,118;UBERON:0004921,1.26e-09,114;UBERON:0003914,1.14e-08,47;UBERON:0000344,5.12e-08,15;UBERON:0005256,6.26e-07,45;UBERON:0001242,8.18e-07,13;UBERON:0001262,8.18e-07,13;UBERON:0004786,8.18e-07,13
|phase1_expression=6.72625157840135,13.2610654902957,23.2049612088663,47.4868811751723,40.0716583957078,14.4376173844225,14.2503710763271,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,52.9574919446176,33.723164316874,14.9300310669905,16.7997178502039,22.1935369666466,44.2754567333351,46.8776041353471,2.88249663851896,0,0,0,16.7533939455739,13.1325369833209,17.5585646385637,0,0,0,0,0,0,1.38486499773135,4.1564541800001,0.734187008646726,0,0,4.17403747195497,13.8045228342741,0.419959264876088,1.43752564364972,0,0,0,0.257259436035947,2.0057340795713,3.09403255366465,0,0,0,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0.405017814995072,0,1.14260393761521,0.662605622854841,0.367472397644862,0,0,0,2.17068474744819,2.15049146558741,0,0,0.52091337055676,2.51264699101243,1.12552522006336,2.13917546887534,1.47314292736834,1.70846016958924,1.67759501242771,0.075726193333184,0.906858721281426,30.7256358023778,18.9293252935905,12.9194553404473,30.2233787317178,74.0745115890343,76.164570806547,18.117330196996,0,0,0,3.80277233397037,0,0,0,0.432982082022428,0.506719730950197,0.505524445014783,38.9367029841994,0.258937883647172,1.63286352971307,1.90833859442749,3.65358573974569,3.45923245884088,1.65794904607885,3.29248379979973,5.27799683584637,0,19.9547112549478,0,1.7794353494215,0,0.969750506270444,18.6391761218122,3.80615036115011,1.25668024088073,45.7268128823379,0,0,0,4.79330046095433,1.37250180845588,0.376963056338593,2.9550134432687,3.58001640262463,4.1557608911912,2.10913641988085,4.78645010096487,4.72746488318353,14.9106427475868,13.6787206326208,1.82168620147785,2.75882525320168,3.96136685571768,2.56198190320716,0.95251098811859,1.5373646434182,1.49922759295566,6.20888089773638,0.215567992932842,1.32374256117473,0.527853372491847,1.31517439456545,0.556094498451196,1.0447564995665,1.02891068203972,4.37875387000685,0,0,0,3.31401236056803,3.75241695969754,5.94204802821349,7.10234206755631,5.3126342571799,5.39934895105824,3.48800917125612,2.14618721119695,2.21854150497622,5.26591519723137,1.47750717671186,1.78351381000883,1.75439984910399,1.53685080703735,1.74468344388483,2.52347938276953,1.44066457330998,111.35112986554,66.9059933658767,2.55945900642281,3.25131340604614,8.89185483122444,21.5801371346977,26.4629872175396,19.2127882373685,56.4689583237969,23.5519505255336,23.1228392096248,27.8539060857611,23.9805827156518,55.7268033365617,62.0316203140372,82.6436284005624,0.569003702859245,1.94222471436539,1.1270773567308,1.01825663922657,2.13347735884388,1.47285221769669,1.7706230394792,0.442830443938806,0.627994911365499,0.246794327843601,53.9543781298611,6.34011401721157,8.45203678986773,8.7696223830093,15.0116489827492,23.153007336232,21.6431974014207,25.6049562331221,22.2125260681798,25.2596500133035,20.1275489138296,33.8648262378338,34.9482193888308,41.4229359833263,46.6433275156972,61.752770734511,3.14080423283228,2.08440552947533,3.58522948172457,4.07388205860452,2.81628297946203,1.17254380209271,1.42826184531608,1.56106918286239,2.20689201748667,3.32197034473162,3.18909537314974,3.4411296090305,2.76295970985433,1.88043776155965,0,0,3.93411418415229,3.86311444826625,4.33486592967038,3.6335622843583,0.163934945376675,1.76729649043061,2.83957397474631,1.17131623288992,2.15423397732799,2.38968797952552,3.11918143715352,1.69845918473299,2.02405350837447,3.50707029493574,1.18586333383957,3.21321316421807,13.200427924369,4.45164009168138,4.56083486190013,20.6212653715669,15.9294166007955,2.6705869977048,2.41858845571801,6.22396763194464,5.02013217897314,11.0676653259814,11.8877014857382,12.3601468022352,14.9728898921583,14.2216541071117,5.27093042874994,8.25084345985495,1.36175842301515,1.44048875225048,0.517434735131018,4.28674070063185,3.72414490648775,1.96205699362278,3.29098041204242,0.304464949114599,0.23467170806371,0,1.32317038832977,2.14352128823924,1.93757312035087,2.41251699712623,1.55184047204077,1.80554989719567,50.717665573594,4.07935664423121,0,3.714963623338,1.11116716421827,0,0,0.228778173206523,0,0,0,26.7307773044232,6.64305586520384,14.2323626988794,20.8450307786076,24.0451540416639,24.6749697033181,22.7920745390347,26.6144127435582,25.1285704304668,13.9984171155136,0.621339313086926,0,4.48549638131936,3.47462829959905,8.94475466382619,7.10379029127521,9.63049915297436,12.9092962510329,7.03103678157331,2.20204623293993,0.966336483304024,0.864090018773596,0.948033361884535,2.63542779877213,3.08132871494482,1.68897069871134,0.537080087002444,1.19208812868759,0.721172697119813,0.738447635872886,1.11063094942962,0.533447646584999,0.806609481094724,0.682205165178267,0.384847366561318,0.467507608726276,0.453460767230423,0,0,0,9.07991091951295,5.2551093126331,14.4689783171139,4.07299920250225,8.02515366456581,0,0.920650473014354,0.572895513439397,0.515559547031063,0,0.755393897389701,1.35004500046361,2.2516060161211,3.17199686288943,0,0.62272408550506,2.79317411380722,1.87806966329548,3.64660075602441,5.03071590307158,4.77993121970037,7.11189528965169,7.0051919461224,6.09746498224449,8.59170519996911,6.5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|phase1_expression=6.72625157840135,13.2610654902957,23.2049612088663,47.4868811751723,40.0716583957078,14.4376173844225,14.2503710763271,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,52.9574919446176,33.723164316874,14.9300310669905,16.7997178502039,22.1935369666466,44.2754567333351,46.8776041353471,2.88249663851896,0,0,0,16.7533939455739,13.1325369833209,17.5585646385637,0,0,0,0,0,0,1.38486499773135,4.1564541800001,0.734187008646726,0,0,4.17403747195497,13.8045228342741,0.419959264876088,1.43752564364972,0,0,0,0.257259436035947,2.0057340795713,3.09403255366465,0,0,0,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0.405017814995072,0,1.14260393761521,0.662605622854841,0.367472397644862,0,0,0,2.17068474744819,2.15049146558741,0,0,0.52091337055676,2.51264699101243,1.12552522006336,2.13917546887534,1.47314292736834,1.70846016958924,1.67759501242771,0.075726193333184,0.906858721281426,30.7256358023778,18.9293252935905,12.9194553404473,30.2233787317178,74.0745115890343,76.164570806547,18.117330196996,0,0,0,3.80277233397037,0,0,0,0.432982082022428,0.506719730950197,0.505524445014783,38.9367029841994,0.258937883647172,1.63286352971307,1.90833859442749,3.65358573974569,3.45923245884088,1.65794904607885,3.29248379979973,5.27799683584637,0,19.9547112549478,0,1.7794353494215,0,0.969750506270444,18.6391761218122,3.80615036115011,1.25668024088073,45.7268128823379,0,0,0,4.79330046095433,1.37250180845588,0.376963056338593,2.9550134432687,3.58001640262463,4.1557608911912,2.10913641988085,4.78645010096487,4.72746488318353,14.9106427475868,13.6787206326208,1.82168620147785,2.75882525320168,3.96136685571768,2.56198190320716,0.95251098811859,1.5373646434182,1.49922759295566,6.20888089773638,0.215567992932842,1.32374256117473,0.527853372491847,1.31517439456545,0.556094498451196,1.0447564995665,1.02891068203972,4.37875387000685,0,0,0,3.31401236056803,3.75241695969754,5.94204802821349,7.10234206755631,5.3126342571799,5.39934895105824,3.48800917125612,2.14618721119695,2.21854150497622,5.26591519723137,1.47750717671186,1.78351381000883,1.75439984910399,1.53685080703735,1.74468344388483,2.52347938276953,1.44066457330998,111.35112986554,66.9059933658767,2.55945900642281,3.25131340604614,8.89185483122444,21.5801371346977,26.4629872175396,19.2127882373685,56.4689583237969,23.5519505255336,23.1228392096248,27.8539060857611,23.9805827156518,55.7268033365617,62.0316203140372,82.6436284005624,0.569003702859245,1.94222471436539,1.1270773567308,1.01825663922657,2.13347735884388,1.47285221769669,1.7706230394792,0.442830443938806,0.627994911365499,0.246794327843601,53.9543781298611,6.34011401721157,8.45203678986773,8.7696223830093,15.0116489827492,23.153007336232,21.6431974014207,25.6049562331221,22.2125260681798,25.2596500133035,20.1275489138296,33.8648262378338,34.9482193888308,41.4229359833263,46.6433275156972,61.752770734511,3.14080423283228,2.08440552947533,3.58522948172457,4.07388205860452,2.81628297946203,1.17254380209271,1.42826184531608,1.56106918286239,2.20689201748667,3.32197034473162,3.18909537314974,3.4411296090305,2.76295970985433,1.88043776155965,0,0,3.93411418415229,3.86311444826625,4.33486592967038,3.6335622843583,0.163934945376675,1.76729649043061,2.83957397474631,1.17131623288992,2.15423397732799,2.38968797952552,3.11918143715352,1.69845918473299,2.02405350837447,3.50707029493574,1.18586333383957,3.21321316421807,13.200427924369,4.45164009168138,4.56083486190013,20.6212653715669,15.9294166007955,2.6705869977048,2.41858845571801,6.22396763194464,5.02013217897314,11.0676653259814,11.8877014857382,12.3601468022352,14.9728898921583,14.2216541071117,5.27093042874994,8.25084345985495,1.36175842301515,1.44048875225048,0.517434735131018,4.28674070063185,3.72414490648775,1.96205699362278,3.29098041204242,0.304464949114599,0.23467170806371,0,1.32317038832977,2.14352128823924,1.93757312035087,2.41251699712623,1.55184047204077,1.80554989719567,50.717665573594,4.07935664423121,0,3.714963623338,1.11116716421827,0,0,0.228778173206523,0,0,0,26.7307773044232,6.64305586520384,14.2323626988794,20.8450307786076,24.0451540416639,24.6749697033181,22.7920745390347,26.6144127435582,25.1285704304668,13.9984171155136,0.621339313086926,0,4.48549638131936,3.47462829959905,8.94475466382619,7.10379029127521,9.63049915297436,12.9092962510329,7.03103678157331,2.20204623293993,0.966336483304024,0.864090018773596,0.948033361884535,2.63542779877213,3.08132871494482,1.68897069871134,0.537080087002444,1.19208812868759,0.721172697119813,0.738447635872886,1.11063094942962,0.533447646584999,0.806609481094724,0.682205165178267,0.384847366561318,0.467507608726276,0.453460767230423,0,0,0,9.07991091951295,5.2551093126331,14.4689783171139,4.07299920250225,8.02515366456581,0,0.920650473014354,0.572895513439397,0.515559547031063,0,0.755393897389701,1.35004500046361,2.2516060161211,3.17199686288943,0,0.62272408550506,2.79317411380722,1.87806966329548,3.64660075602441,5.03071590307158,4.77993121970037,7.11189528965169,7.0051919461224,6.09746498224449,8.59170519996911,6.5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|short_description=p2@Bche
}}
}}

Latest revision as of 16:46, 25 September 2015

Short description:p2@Bche
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Bche_5end
Coexpression cluster:MCL_coexpression_mm9:3415
Association with transcript: 0bp_to_ENSMUST00000029367, NM_009738, uc008pmw.1, uc008pmx.1_5end
EntrezGene:Bche
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Bche

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.73
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I513.26
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I623.20
CD326+ enterocyte, pool1.CNhs13542.11848-124I347.49
CD326+ enterocyte, pool2.CNhs13197.11849-124I440.07
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I714.44
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I814.25
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D152.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D233.72
GP2+ M cell, pool1.CNhs13228.11845-124H914.93
GP2+ M cell, pool2.CNhs13231.11846-124I116.80
GP2+ M cell, pool3.CNhs13240.11847-124I222.19
Ileum epithelium, pool1.CNhs13199.10252-104B944.28
Ileum epithelium, pool2.CNhs13232.10253-104C146.88
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F516.75
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F613.13
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F717.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.16
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.17
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C313.80
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.68
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.91
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G330.73
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F718.93
Mouse hepatocyte, donor1.CNhs13078.11714-123C412.92
Mouse hepatocyte, donor3.CNhs12615.11637-122C830.22
Mouse hepatocyte, donor6.CNhs13090.11822-124F474.07
Mouse hepatocyte, donor8.CNhs13091.11824-124F676.16
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A718.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.80
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B638.94
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D71.63
adrenal gland, embryo E14.CNhs11038.406-44C51.91
adrenal gland, embryo E16.CNhs11004.1254-43D63.65
adrenal gland, embryo E17.CNhs11043.1263-45I13.46
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C13.29
adrenal gland, neonate N25.CNhs11223.1377-27I35.28
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H119.95
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.78
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H418.64
cerebellum, adult.CNhs10494.15-8B23.81
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H745.73
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.79
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D52.96
cortex, neonate N30.CNhs11107.1392-42F23.58
diencephalon, adult.CNhs10482.20-12F24.16
diencephalon, neonate N30.CNhs11201.1388-42B22.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.79
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.73
epididymis, adult.CNhs10490.58-23B214.91
eyeball, adult.CNhs10484.31-12G413.68
eyeball, embryo E12.CNhs11016.345-16C61.82
eyeball, embryo E14.CNhs10521.399-16E22.76
eyeball, embryo E15.CNhs10593.426-16C93.96
eyeball, embryo E17.CNhs11023.1261-18D42.56
eyeball, neonate N00.CNhs11207.633-15C60.95
eyeball, neonate N01.CNhs11140.1532-43E71.54
eyeball, neonate N02.CNhs11205.1551-44G81.50
eyeball, neonate N16.CNhs11188.777-19A26.21
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I64.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E93.31
heart, embryo E12.CNhs11015.353-12F53.75
heart, embryo E13.CNhs11013.376-3I95.94
heart, embryo E14.CNhs10597.403-26D47.10
heart, embryo E15.CNhs11017.431-16C85.31
heart, embryo E16.CNhs11021.457-17C65.40
heart, embryo E17.CNhs11025.479-18E53.49
heart, embryo E18.CNhs11030.1283-20G32.15
heart, neonate N00.CNhs11213.639-21E32.22
heart, neonate N03.CNhs11221.1349-25I25.27
heart, neonate N10.CNhs11118.749-24G11.48
heart, neonate N16.CNhs11209.782-15G11.78
heart, neonate N20.CNhs11127.821-26I61.75
heart, neonate N25.CNhs11196.1351-25D31.54
heart, neonate N30.CNhs11202.1390-42D21.74
hippocampus, adult.CNhs10478.13-16E82.52
hippocampus, neonate N00.CNhs11228.627-43G11.44
intestinal mucosa, adult.CNhs10506.860-29I3111.35
intestine, adult.CNhs10496.178-9A366.91
intestine, embryo E12.CNhs11019.1251-16I52.56
intestine, embryo E13.CNhs11010.381-16D53.25
intestine, embryo E15.CNhs10602.976-16D88.89
intestine, embryo E16.CNhs10585.463-22H421.58
intestine, embryo E17.CNhs10582.482-18D326.46
intestine, embryo E18.CNhs10526.1289-20F719.21
intestine, neonate N00.CNhs11126.644-26D156.47
intestine, neonate N01.CNhs11192.1322-23E923.55
intestine, neonate N06.CNhs11102.688-20B823.12
intestine, neonate N07.CNhs11095.720-20F227.85
intestine, neonate N10.CNhs11098.755-23A523.98
intestine, neonate N20.CNhs11187.827-18D155.73
intestine, neonate N25.CNhs11121.1352-25E362.03
intestine, neonate N30.CNhs11131.1384-42G182.64
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.94
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C72.13
kidney, neonate N00.CNhs11214.646-21G71.47
kidney, neonate N10.CNhs11206.758-6D51.77
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B253.95
liver, embryo E12.CNhs10601.355-15F86.34
liver, embryo E13.CNhs10524.378-3H68.45
liver, embryo E14.CNhs10594.409-16E18.77
liver, embryo E15.CNhs10520.433-16D715.01
liver, embryo E16.CNhs10523.462-17F523.15
liver, embryo E17.CNhs10510.481-18A321.64
liver, embryo E18.CNhs10579.499-43G425.60
liver, neonate N00.CNhs11117.641-24F422.21
liver, neonate N03.CNhs11123.1345-25G225.26
liver, neonate N06.CNhs11101.684-20A820.13
liver, neonate N07.CNhs11103.716-20H233.86
liver, neonate N10.CNhs11115.751-24B934.95
liver, neonate N20.CNhs11220.823-25A341.42
liver, neonate N25.CNhs11198.1368-26H146.64
liver, neonate N30.CNhs11106.1382-42D161.75
lung, adult.CNhs10474.28-22B13.14
lung, embryo E12.CNhs10522.354-16G22.08
lung, embryo E14.CNhs10604.404-26F83.59
lung, embryo E15.CNhs11020.432-17C54.07
lung, embryo E16.CNhs10998.458-17B62.82
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E52.21
lung, neonate N07.CNhs11111.715-19A33.32
lung, neonate N10.CNhs11219.750-23E63.19
lung, neonate N20.CNhs11109.822-18A43.44
lung, neonate N25.CNhs11119.1359-25C72.76
lung, neonate N30.CNhs11133.1394-42H21.88
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B63.93
mammary gland, adult pregnant day19.CNhs10476.588-5H23.86
medulla oblongata, adult.CNhs10477.17-12C24.33
medulla oblongata, neonate N30.CNhs11200.1396-42A33.63
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.12
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.51
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I713.20
ovary, embryo E18.CNhs11040.505-44H74.45
ovary, neonate N00.CNhs11217.1299-22I44.56
oviduct, adult pregnant day01.CNhs10500.988-6G620.62
pancreas, adult.CNhs10486.34-16E415.93
pancreas, embryo E14.CNhs11012.405-44F42.67
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E56.22
pancreas, embryo E17.CNhs10599.1558-45G35.02
pancreas, embryo E18.CNhs10580.1535-43I711.07
pancreas, neonate N00.CNhs11105.645-26G911.89
pancreas, neonate N01.CNhs11138.1531-43D712.36
pancreas, neonate N02.CNhs11139.1539-43D814.97
pancreas, neonate N16.CNhs11136.787-43B614.22
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H58.25
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A54.29
pituitary gland, embryo E15.CNhs10592.427-16B93.72
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F53.29
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C32.14
skin, neonate N00.CNhs11124.650-25G41.94
skin, neonate N03.CNhs11215.662-22H32.41
skin, neonate N06.CNhs11097.693-20I51.55
skin, neonate N10.CNhs11108.762-6C41.81
small intestine, neonate N16.CNhs11114.790-21I150.72
spinal cord, adult.CNhs10505.24-13C94.08
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C13.71
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H626.73
stomach, embryo E12.CNhs10588.356-43E36.64
stomach, embryo E15.CNhs10603.1252-16G814.23
stomach, embryo E16.CNhs11022.459-17D420.85
stomach, embryo E17.CNhs11006.1035-18D524.05
stomach, embryo E18.CNhs10999.1286-20C624.67
stomach, neonate N03.CNhs11193.1340-24B822.79
stomach, neonate N07.CNhs11210.718-18A926.61
stomach, neonate N25.CNhs11104.1355-25E425.13
stomach, neonate N30.CNhs11134.1386-42I114.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F54.49
testis, embryo E15.CNhs11034.443-27C53.47
testis, embryo E16.CNhs11033.470-26G58.94
testis, embryo E17.CNhs11029.486-18I57.10
testis, embryo E18.CNhs11027.503-18G59.63
testis, neonate N00.CNhs11189.1300-22B712.91
testis, neonate N07.CNhs11222.726-26I47.03
testis, neonate N10.CNhs11204.763-44D92.20
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I42.64
thymus, embryo E15.CNhs11005.430-45I23.08
thymus, embryo E16.CNhs11002.456-26C51.69
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C41.11
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E40.81
thymus, neonate N20.CNhs11186.820-7A20.68
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E49.08
uterus, adult pregnant day19.CNhs10497.590-15F55.26
uterus, adult.CNhs10509.92-27E514.47
vagina, adult.CNhs10502.89-27D54.07
vesicular gland, adult.CNhs10491.51-27F88.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D23.65
whole body, embryo E14.CNhs10519.395-14B15.03
whole body, embryo E16.CNhs10514.453-14F24.78
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G57.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.01
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.59
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.43
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.89
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.59
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.54
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.73
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.96
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.65
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.65
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.39
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.34
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.03
whole body, embryo E17.5.CNhs10513.490-9F96.17
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B37.49
whole body, neonate N00.CNhs10525.657-19C25.80
whole body, neonate N01.CNhs10576.659-23C62.49
whole body, neonate N06.CNhs10515.692-21D12.65
whole body, neonate N10.CNhs10518.761-6B43.94





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
intestine4.53e-1531
gastrointestinal system4.62e-1547
digestive tract diverticulum1.05e-1223
sac1.05e-1223
liver2.80e-1222
epithelial sac2.80e-1222
digestive gland2.80e-1222
epithelium of foregut-midgut junction2.80e-1222
anatomical boundary2.80e-1222
hepatobiliary system2.80e-1222
foregut-midgut junction2.80e-1222
hepatic diverticulum2.80e-1222
liver primordium2.80e-1222
septum transversum2.80e-1222
liver bud2.80e-1222
exocrine gland7.02e-1125
exocrine system7.02e-1125
digestive system1.62e-10116
digestive tract1.62e-10116
primitive gut1.62e-10116
endoderm-derived structure1.04e-09118
endoderm1.04e-09118
presumptive endoderm1.04e-09118
subdivision of digestive tract1.26e-09114
epithelial tube1.14e-0847
mucosa5.12e-0815
trunk mesenchyme6.26e-0745
intestinal mucosa8.18e-0713
wall of intestine8.18e-0713
gastrointestinal system mucosa8.18e-0713
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