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FFCP PHASE1:Mm9::chr2:25160647..25160666,-: Difference between revisions

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(Created page with "{{FFCP |id=chr2:25160647..25160666,- |short_description=p3@Grin1 |description=CAGE_peak_3_at_Grin1_5end |association_with_transcript=-27bp_to_ENSMUST00000153465_5end |Ent...")
 
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{{FFCP
{{FFCP
|id=chr2:25160647..25160666,-
|DHSsupport=NA
|short_description=p3@Grin1
|DPIdataset=NA
|description=CAGE_peak_3_at_Grin1_5end
|association_with_transcript=-27bp_to_ENSMUST00000153465_5end
|EntrezGene=14810
|EntrezGene=14810
|HGNC=
|HGNC=
|MCL_coexpression_id=1169
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-27bp_to_ENSMUST00000153465_5end
|cluster_id=chr2:25160647..25160666,-
|description=CAGE_peak_3_at_Grin1_5end
|id=chr2:25160647..25160666,-
|ontology_enrichment_celltype=CL:0002319!1.29e-16!43;CL:0000221!7.87e-16!44;CL:0000133!7.87e-16!44;CL:0000055!2.82e-14!50;CL:0000540!8.58e-14!33;CL:0000047!8.58e-14!33;CL:0000031!8.58e-14!33;CL:0000404!8.58e-14!33;CL:0000117!3.11e-13!23;CL:0000337!3.11e-13!23;CL:0000393!5.01e-12!39;CL:0000211!5.01e-12!39
|ontology_enrichment_celltype_v019_2=CL:0000117,4.07e-24,23;CL:0000337,4.07e-24,23;CL:0002319,2.82e-22,43;CL:0000221,1.12e-21,44;CL:0000133,1.12e-21,44;CL:0002609,2.40e-18,6;CL:0000540,6.61e-16,33;CL:0000047,6.61e-16,33;CL:0000031,6.61e-16,33;CL:0000404,6.61e-16,33;CL:0000393,5.29e-13,39;CL:0000211,5.29e-13,39;CL:0000128,2.30e-12,6;CL:0000126,2.30e-12,6;CL:0000127,2.30e-12,6;CL:0002321,4.03e-12,70;CL:0002613,7.13e-11,3;CL:0000120,4.58e-10,3;CL:0002608,7.46e-10,3;CL:0002453,3.31e-09,8;CL:0000333,2.62e-07,10;CL:0000095,2.62e-07,10;CL:0000243,2.62e-07,10;CL:0000123,2.62e-07,10;CL:0000125,2.62e-07,10;CL:0000030,2.62e-07,10;CL:0000339,2.62e-07,10
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!9.56e-20!73;UBERON:0005743!9.56e-20!73;UBERON:0000073!1.47e-19!75;UBERON:0001016!1.47e-19!75;UBERON:0002020!1.26e-16!34;UBERON:0004121!4.51e-16!102;UBERON:0000924!4.51e-16!102;UBERON:0006601!4.51e-16!102;UBERON:0002346!1.65e-15!71;UBERON:0003075!1.65e-15!71;UBERON:0007284!1.65e-15!71;UBERON:0002791!4.48e-14!29;UBERON:0003528!4.48e-14!29;UBERON:0001893!4.48e-14!29;UBERON:0001049!1.87e-13!52;UBERON:0005068!1.87e-13!52;UBERON:0006241!1.87e-13!52;UBERON:0007135!1.87e-13!52;UBERON:0003056!3.13e-12!49;UBERON:0000033!4.36e-12!63;UBERON:0000955!1.88e-11!50;UBERON:0006238!1.88e-11!50;UBERON:0002616!6.40e-11!49;UBERON:0002780!1.28e-10!39;UBERON:0001890!1.28e-10!39;UBERON:0006240!1.28e-10!39;UBERON:0003080!1.53e-10!40;UBERON:0000956!1.37e-09!21;UBERON:0001869!1.37e-09!21;UBERON:0000203!1.37e-09!21;UBERON:0002619!6.63e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.89e-20,34;UBERON:0003528,1.54e-18,29;UBERON:0002791,1.54e-18,29;UBERON:0001893,1.54e-18,29;UBERON:0001017,2.63e-16,73;UBERON:0001016,9.47e-16,75;UBERON:0001954,2.08e-15,7;UBERON:0003022,2.08e-15,7;UBERON:0002421,2.08e-15,7;UBERON:0000349,2.08e-15,7;UBERON:0002600,2.08e-15,7;UBERON:0001049,8.59e-14,52;UBERON:0005068,8.59e-14,52;UBERON:0006241,8.59e-14,52;UBERON:0007135,8.59e-14,52;UBERON:0000073,3.80e-13,54;UBERON:0002780,5.05e-13,39;UBERON:0001890,5.05e-13,39;UBERON:0006240,5.05e-13,39;UBERON:0000956,6.74e-13,21;UBERON:0001869,6.74e-13,21;UBERON:0000203,6.74e-13,21;UBERON:0003080,1.27e-12,40;UBERON:0002616,2.72e-12,46;UBERON:0000955,5.80e-12,47;UBERON:0006238,5.80e-12,47;UBERON:0004121,1.83e-11,95;UBERON:0000924,1.83e-11,95;UBERON:0006601,1.83e-11,95;UBERON:0000369,4.93e-11,5;UBERON:0002435,4.93e-11,5;UBERON:0000204,4.93e-11,5;UBERON:0010082,4.93e-11,5;UBERON:0002346,1.58e-10,64;UBERON:0003075,1.58e-10,64;UBERON:0007284,1.58e-10,64;UBERON:0003056,9.14e-10,49;UBERON:0010371,8.69e-09,73;UBERON:0002420,6.99e-07,8;UBERON:0007245,6.99e-07,8;UBERON:0010009,6.99e-07,8;UBERON:0010011,6.99e-07,8;UBERON:0000454,6.99e-07,8
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.0850432901510698,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,1.56478268869608,0,1.09843091367236,1.74986909166855,1.39986421625363,4.31257693094915,0,0,0,0.514518872071894,0.573066879877513,0,1.41621522601718,2.11596391708813,3.80298842103708,1.0165335962074,0.889294796111139,0,0.988866362566974,0,0.599200221036809,0.384218305321555,1.65903379693564,2.43010688997043,2.10324961351382,1.42825492201902,0.883474163806454,1.5923803897944,1.82106394934649,1.83843757322004,0,0.255374676170375,0.768032666281217,4.48413378282659,4.84884511092771,5.73004707612436,0.558365998002762,0.56276261003168,0.916789486660861,0.294628585473668,0.854230084794618,1.3047961207771,0,0.604572480854284,0,0,0,0,0,0,0.280888840263504,0.511290967734173,1.03914401841148,0,0,0,0,0,0,0.253359865475099,0,0,0,0.29688427812965,0.173485326766136,0.304465478312141,0,0.150722640552623,0.23517741427141,0,0,0,0,0.161766849947409,0.220841518460394,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.149790639404823,0.457500602818626,2.38743269014442,1.21677024134594,1.02286182932132,0,0.486723789203273,0.407357455401265,0,0,0,0.260240885925407,0.919608417733892,0.540186389416048,0.90422890701429,0.884474488967262,0.640568601424249,0.843315521037559,0,0.862271971731369,0,0.175951124163949,0.219195732427575,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0.630869845692382,9.67303356365274,0,0,0,0,0.515469845288373,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0,0.19496408711912,0,0.216138049874694,0,0.569003702859245,0.114248512609729,0,0,0.193952487167626,0.140271639780637,0.0632365371242573,0,0.156998727841375,0,0,0,0.393117990226406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0,0,0,0.167506257441816,0,0,0.315270288212382,0.221464689648775,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0.631016438832513,0.390438744296638,0.430846795465598,0.238968797952552,0.445597348164788,0,0.809621403349789,0.876767573733936,0,0.963963949265421,0.425820255624806,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0.177340233642274,0,0.329098041204242,0,0,0,0,0,0,0.180938774784468,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0.949007980743406,0.203319467126849,0.324016022465404,0.209088296014469,0.436725127492355,0,0.247960367176008,0.26175594198403,0,0,0,0.747582730219894,0.496375471371293,0.194451188344048,1.29159823477731,0.675824501963113,0.234714477291508,0.39061315453185,0.629156066554265,0.241584120826006,0.576060012515731,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0.0897138566094757,0,0.386379188064381,0.187682475451182,0.183151624267265,0,0,0,0.460325236507177,0.572895513439397,0.515559547031063,0.685082519770642,0.755393897389701,0,0.45032120322422,0.906284817968409,0.51776031175182,0.31136204275253,0,0.853668028770671,0.486213434136588,0.419226325255965,0.183843508450014,0.666740183404846,0.206035057238894,0.64183841918363,0.758091635291392,0.25347929989024,1.13175804831646,0.655490552289177,0.704276676453562,0.34461281373368,0.952587382566147,0.927074607558844,0.578727661391115,2.06042950401653,1.17759136107518,0,0.532427418478012,0.715308569841963,0.872078499793971,0.470546902076653,0.676916863133412,0.365855945745545,0.263069711437843,0.814824683075171,0.561142271657738,0.593175090620871,0.492522411877817,0,0.619747364743864,0.578719832943424,1.74867404556562,0,0.429742108096597,0,0,0
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.0850432901510698,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,1.56478268869608,0,1.09843091367236,1.74986909166855,1.39986421625363,4.31257693094915,0,0,0,0.514518872071894,0.573066879877513,0,1.41621522601718,2.11596391708813,3.80298842103708,1.0165335962074,0.889294796111139,0,0.988866362566974,0,0.599200221036809,0.384218305321555,1.65903379693564,2.43010688997043,2.10324961351382,1.42825492201902,0.883474163806454,1.5923803897944,1.82106394934649,1.83843757322004,0,0.255374676170375,0.768032666281217,4.48413378282659,4.84884511092771,5.73004707612436,0.558365998002762,0.56276261003168,0.916789486660861,0.294628585473668,0.854230084794618,1.3047961207771,0,0.604572480854284,0,0,0,0,0,0,0.280888840263504,0.511290967734173,1.03914401841148,0,0,0,0,0,0,0.253359865475099,0,0,0,0.29688427812965,0.173485326766136,0.304465478312141,0,0.150722640552623,0.23517741427141,0,0,0,0,0.161766849947409,0.220841518460394,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.149790639404823,0.457500602818626,2.38743269014442,1.21677024134594,1.02286182932132,0,0.486723789203273,0.407357455401265,0,0,0,0.260240885925407,0.919608417733892,0.540186389416048,0.90422890701429,0.884474488967262,0.640568601424249,0.843315521037559,0,0.862271971731369,0,0.175951124163949,0.219195732427575,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0.630869845692382,9.67303356365274,0,0,0,0,0.515469845288373,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0,0.19496408711912,0,0.216138049874694,0,0.569003702859245,0.114248512609729,0,0,0.193952487167626,0.140271639780637,0.0632365371242573,0,0.156998727841375,0,0,0,0.393117990226406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0,0,0,0.167506257441816,0,0,0.315270288212382,0.221464689648775,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0.631016438832513,0.390438744296638,0.430846795465598,0.238968797952552,0.445597348164788,0,0.809621403349789,0.876767573733936,0,0.963963949265421,0.425820255624806,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0.177340233642274,0,0.329098041204242,0,0,0,0,0,0,0.180938774784468,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0.949007980743406,0.203319467126849,0.324016022465404,0.209088296014469,0.436725127492355,0,0.247960367176008,0.26175594198403,0,0,0,0.747582730219894,0.496375471371293,0.194451188344048,1.29159823477731,0.675824501963113,0.234714477291508,0.39061315453185,0.629156066554265,0.241584120826006,0.576060012515731,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0.0897138566094757,0,0.386379188064381,0.187682475451182,0.183151624267265,0,0,0,0.460325236507177,0.572895513439397,0.515559547031063,0.685082519770642,0.755393897389701,0,0.45032120322422,0.906284817968409,0.51776031175182,0.31136204275253,0,0.853668028770671,0.486213434136588,0.419226325255965,0.183843508450014,0.666740183404846,0.206035057238894,0.64183841918363,0.758091635291392,0.25347929989024,1.13175804831646,0.655490552289177,0.704276676453562,0.34461281373368,0.952587382566147,0.927074607558844,0.578727661391115,2.06042950401653,1.17759136107518,0,0.532427418478012,0.715308569841963,0.872078499793971,0.470546902076653,0.676916863133412,0.365855945745545,0.263069711437843,0.814824683075171,0.561142271657738,0.593175090620871,0.492522411877817,0,0.619747364743864,0.578719832943424,1.74867404556562,0,0.429742108096597,0,0,0
|short_description=p3@Grin1
}}
}}

Latest revision as of 10:09, 26 September 2015

Short description:p3@Grin1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Grin1_5end
Coexpression cluster:MCL_coexpression_mm9:1169
Association with transcript: -27bp_to_ENSMUST00000153465_5end
EntrezGene:Grin1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Grin1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.43
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.82
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.48
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.85
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F12.39
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.88
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G19.67
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I51.29
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.07e-2423
neuroblast (sensu Vertebrata)4.07e-2423
neural cell2.82e-2243
ectodermal cell1.12e-2144
neurectodermal cell1.12e-2144
neuron of cerebral cortex2.40e-186
neuron6.61e-1633
neuronal stem cell6.61e-1633
neuroblast6.61e-1633
electrically signaling cell6.61e-1633
electrically responsive cell5.29e-1339
electrically active cell5.29e-1339
oligodendrocyte2.30e-126
macroglial cell2.30e-126
astrocyte2.30e-126
embryonic cell4.03e-1270
striatum neuron7.13e-113
granule cell4.58e-103
hippocampal neuron7.46e-103
oligodendrocyte precursor cell3.31e-098
migratory neural crest cell2.62e-0710
neuron associated cell2.62e-0710
glial cell (sensu Vertebrata)2.62e-0710
neuron associated cell (sensu Vertebrata)2.62e-0710
glial cell2.62e-0710
glioblast2.62e-0710
glioblast (sensu Vertebrata)2.62e-0710

Uber anatomy
Ontology termp-valuen
gray matter2.89e-2034
brain grey matter1.54e-1829
regional part of telencephalon1.54e-1829
telencephalon1.54e-1829
central nervous system2.63e-1673
nervous system9.47e-1675
Ammon's horn2.08e-157
lobe parts of cerebral cortex2.08e-157
hippocampal formation2.08e-157
limbic system2.08e-157
limbic lobe2.08e-157
neural tube8.59e-1452
neural rod8.59e-1452
future spinal cord8.59e-1452
neural keel8.59e-1452
regional part of nervous system3.80e-1354
regional part of forebrain5.05e-1339
forebrain5.05e-1339
future forebrain5.05e-1339
cerebral cortex6.74e-1321
cerebral hemisphere6.74e-1321
pallium6.74e-1321
anterior neural tube1.27e-1240
regional part of brain2.72e-1246
brain5.80e-1247
future brain5.80e-1247
ectoderm-derived structure1.83e-1195
ectoderm1.83e-1195
presumptive ectoderm1.83e-1195
corpus striatum4.93e-115
striatum4.93e-115
ventral part of telencephalon4.93e-115
future corpus striatum4.93e-115
neurectoderm1.58e-1064
neural plate1.58e-1064
presumptive neural plate1.58e-1064
pre-chordal neural plate9.14e-1049
ecto-epithelium8.69e-0973
basal ganglion6.99e-078
nuclear complex of neuraxis6.99e-078
aggregate regional part of brain6.99e-078
collection of basal ganglia6.99e-078
cerebral subcortex6.99e-078
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