Personal tools

FFCP PHASE2:Hg19::chr3:2141982..2141990,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:152330 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding |HGNC=HGNC:2174 |TSSclassifier=stron...")
 
No edit summary
 
Line 2: Line 2:
|DHSsupport=supported   
|DHSsupport=supported   
|DPIdataset=robust
|DPIdataset=robust
|EntrezGene=entrezgene:152330
|EntrezGene=152330
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding
|HGNC=HGNC:2174
|HGNC=2174
|TSSclassifier=strong
|TSSclassifier=strong
|UniProt=
|UniProt=

Latest revision as of 18:49, 17 September 2015

Short description:p16@CNTN4
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_16_at_CNTN4_5end
Coexpression cluster:C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms
Association with transcript: -256bp_to_uc003bpc.2_5end
EntrezGene:CNTN4
HGNC: 2174
UniProt: NA
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0.0
2.5
5.0
7.5
10.0
12.5
15.0
17.5




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data