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FFCP PHASE1:Mm9::chr2:130867053..130867092,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr2:130867053..130867092,-
|DHSsupport=NA
|short_description=p3@Gfra4
|DPIdataset=NA
|description=CAGE_peak_3_at_Gfra4_5end
|association_with_transcript=57bp_to_ENSMUST00000074855_5end
|EntrezGene=14588
|EntrezGene=14588
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=E9Q406
|UniProt=E9Q406
|association_with_transcript=57bp_to_ENSMUST00000074855_5end
|cluster_id=chr2:130867053..130867092,-
|description=CAGE_peak_3_at_Gfra4_5end
|id=chr2:130867053..130867092,-
|ontology_enrichment_celltype=CL:0000117!3.61e-11!23;CL:0000337!3.61e-11!23;CL:0000540!6.91e-08!33;CL:0000047!6.91e-08!33;CL:0000031!6.91e-08!33;CL:0000404!6.91e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000117,1.90e-15,23;CL:0000337,1.90e-15,23;CL:0000540,2.89e-09,33;CL:0000047,2.89e-09,33;CL:0000031,2.89e-09,33;CL:0000404,2.89e-09,33;CL:0002319,6.21e-08,43;CL:0000221,1.23e-07,44;CL:0000133,1.23e-07,44;CL:0000393,3.92e-07,39;CL:0000211,3.92e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!6.92e-24!52;UBERON:0005068!6.92e-24!52;UBERON:0006241!6.92e-24!52;UBERON:0007135!6.92e-24!52;UBERON:0001017!1.75e-23!73;UBERON:0005743!1.75e-23!73;UBERON:0000955!7.66e-23!50;UBERON:0006238!7.66e-23!50;UBERON:0000073!1.38e-22!75;UBERON:0001016!1.38e-22!75;UBERON:0002616!3.20e-22!49;UBERON:0002346!1.59e-21!71;UBERON:0003075!1.59e-21!71;UBERON:0007284!1.59e-21!71;UBERON:0004121!1.13e-20!102;UBERON:0000924!1.13e-20!102;UBERON:0006601!1.13e-20!102;UBERON:0000033!3.17e-20!63;UBERON:0003080!3.97e-18!40;UBERON:0002780!1.92e-17!39;UBERON:0001890!1.92e-17!39;UBERON:0006240!1.92e-17!39;UBERON:0002020!2.20e-16!34;UBERON:0003056!2.65e-16!49;UBERON:0002791!1.80e-13!29;UBERON:0003528!1.80e-13!29;UBERON:0001893!1.80e-13!29;UBERON:0000153!5.86e-11!94;UBERON:0007811!1.52e-10!86;UBERON:0000956!4.56e-09!21;UBERON:0001869!4.56e-09!21;UBERON:0000203!4.56e-09!21;UBERON:0002021!1.57e-08!10;UBERON:0000411!1.57e-08!10;UBERON:0001950!1.57e-08!10;UBERON:0002619!1.99e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.06e-39,54;UBERON:0001049,3.16e-36,52;UBERON:0005068,3.16e-36,52;UBERON:0006241,3.16e-36,52;UBERON:0007135,3.16e-36,52;UBERON:0001017,1.97e-35,73;UBERON:0001016,4.02e-34,75;UBERON:0000955,3.64e-30,47;UBERON:0006238,3.64e-30,47;UBERON:0002616,5.14e-29,46;UBERON:0002346,7.56e-29,64;UBERON:0003075,7.56e-29,64;UBERON:0007284,7.56e-29,64;UBERON:0002020,4.58e-26,34;UBERON:0004121,2.03e-25,95;UBERON:0000924,2.03e-25,95;UBERON:0006601,2.03e-25,95;UBERON:0003080,2.43e-24,40;UBERON:0010371,8.39e-24,73;UBERON:0002780,4.38e-23,39;UBERON:0001890,4.38e-23,39;UBERON:0006240,4.38e-23,39;UBERON:0003528,2.20e-20,29;UBERON:0002791,2.20e-20,29;UBERON:0001893,2.20e-20,29;UBERON:0003056,9.69e-20,49;UBERON:0010314,1.92e-16,92;UBERON:0002021,1.04e-15,10;UBERON:0000411,1.04e-15,10;UBERON:0001950,1.04e-15,10;UBERON:0003076,3.40e-12,12;UBERON:0003057,3.40e-12,12;UBERON:0000956,5.58e-12,21;UBERON:0001869,5.58e-12,21;UBERON:0000203,5.58e-12,21;UBERON:0002619,1.43e-11,17;UBERON:0000025,4.67e-11,114;UBERON:0004111,2.62e-10,122;UBERON:0002420,3.40e-10,8;UBERON:0007245,3.40e-10,8;UBERON:0010009,3.40e-10,8;UBERON:0010011,3.40e-10,8;UBERON:0000454,3.40e-10,8;UBERON:0002240,2.97e-08,6;UBERON:0005174,2.97e-08,6;UBERON:0001137,2.97e-08,6;UBERON:0001948,4.60e-07,5;UBERON:0002315,4.60e-07,5;UBERON:0002950,5.32e-07,4;UBERON:0001891,5.32e-07,4;UBERON:0009616,5.32e-07,4;UBERON:0010286,5.32e-07,4
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33720779770456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.550640256485045,9.38869613217647,0,0,0.194429899074283,2.79972843250725,0,0,0,0,0,0.286533439938757,0,2.63011399117477,2.11596391708813,1.26766280701236,3.38844532069132,5.33576877666684,0.899899717281399,0,0,0,0.384218305321555,0.725827286159344,0.810035629990144,1.68259969081106,8.2838785477103,7.95126747425809,0.61245399607477,0.862609239164127,0,20.9220173898839,11.4918604276669,7.68032666281217,1.58263545276233,2.65314166446988,1.56274011167028,13.959149950069,13.5063026407603,13.9046405476897,6.18720029494702,4.6982654663704,3.16879057903011,0,0.226714680320357,0,0,0,0,0,0,0.561777680527007,0,0,0.35333957451034,0.14084341977668,0,0,0,0,0.253359865475099,0.505524445014783,0.45673551887624,0,0.29688427812965,0.520455980298408,0.913396434936424,0.461230994512117,0.150722640552623,0.470354828542819,0.753999547978053,0,0,0,0,0.220841518460394,0,0,2.04946557908083,2.51336048176146,0,0,0,0,11.5338792341713,10.980014467647,1.50785222535437,14.2535942557667,15.5986428971502,10.1816141834184,10.058958310201,0.101839363850316,0.124406970610093,2.52722758433675,0.631325567659422,0.130120442962704,0.229902104433473,0,0,0.272145996605311,0.12811372028485,0.468508622798644,2.84573707812917,0,0.567318240503458,0.527853372491847,0.657587197282725,0.834141747676794,0.348252166522167,0.411564272815887,0.796137067273973,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0,0,0,0,15.7717461423095,1.54356918568927,0,0,0,0,0.257734922644187,0.403367049246685,0.22237804384487,0.380451252225118,0,0,0,0.198956472041151,0,0,0,0,1.51734320762465,0.685491075658373,1.1270773567308,0.203651327845314,0,0.561086559122548,0.442655759869801,0.442830443938806,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.488894929326078,0.339490171550376,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0.275936746304732,7.22477654945064,7.73597131508541,0,0,0,0.390438744296638,0,0,0,0,0.404810701674894,0.876767573733936,0.395287777946524,5.46246237917072,0,0.534196811001766,1.14020871547503,0.659880491890142,0,0.242780636154981,0,0.188605079755898,0,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0.680879211507576,0.36012218806262,0.776152102696527,0.643011105094777,1.95074257006501,1.96205699362278,2.30368628842969,1.8267896946876,1.40803024838226,0.42366414172764,0.441056796109924,0.32977250588296,0.484393280087717,0.180938774784468,0.238744688006273,0,0.291480836629851,8.34413859047294,0,0,0,0,0,0,0,0,0,1.90934123603023,0.790839983952838,0.406638934253697,0.216010681643603,0.209088296014469,0.436725127492355,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,20.856638731315,0.299033092087958,0.496375471371293,0.583353565032143,0.774958940866387,0.337912250981556,0.234714477291508,0.2604087696879,0.734015410979976,9.66336483304024,9.50499020650956,0,0,0.205421914329655,0,0.179026695667481,0,0.480781798079875,0,0.201932899896295,0.228620419965,0.100826185136841,0,0.0962118416403295,0,0.453460767230423,0,0,0,1.73870634628971,0.563047426353546,0.549454872801795,0,0,12.4245405375755,7.82552902062201,12.6037012956667,12.0297227640581,22.6077231524312,17.3740596399631,22.9507650078814,18.9134905354173,16.7662691324156,16.5683299760582,0.207574695168353,0.399024873401031,1.02440163452481,0,0,0.367687016900028,0.222246727801615,1.23621034343337,0.64183841918363,0.252697211763798,0.760437899670719,0.377252682772152,0.468207537349412,0.576226371643824,0.287177344778066,1.90517476513229,0.115884325944855,0,0,0.294397840268795,0.342869252385415,0.887379030796687,0.476872379894642,0.581385666529314,0.564656282491984,0.25384382367503,1.28049581010941,0.263069711437843,0.271608227691724,1.12228454331548,0.355905054372522,0.788035859004508,0.409231043169689,0,0.964533054905707,0.749431733813838,0.467863216890817,0.644613162144895,0.57386499620653,0.441182838239031,0.695603506861264
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33720779770456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.550640256485045,9.38869613217647,0,0,0.194429899074283,2.79972843250725,0,0,0,0,0,0.286533439938757,0,2.63011399117477,2.11596391708813,1.26766280701236,3.38844532069132,5.33576877666684,0.899899717281399,0,0,0,0.384218305321555,0.725827286159344,0.810035629990144,1.68259969081106,8.2838785477103,7.95126747425809,0.61245399607477,0.862609239164127,0,20.9220173898839,11.4918604276669,7.68032666281217,1.58263545276233,2.65314166446988,1.56274011167028,13.959149950069,13.5063026407603,13.9046405476897,6.18720029494702,4.6982654663704,3.16879057903011,0,0.226714680320357,0,0,0,0,0,0,0.561777680527007,0,0,0.35333957451034,0.14084341977668,0,0,0,0,0.253359865475099,0.505524445014783,0.45673551887624,0,0.29688427812965,0.520455980298408,0.913396434936424,0.461230994512117,0.150722640552623,0.470354828542819,0.753999547978053,0,0,0,0,0.220841518460394,0,0,2.04946557908083,2.51336048176146,0,0,0,0,11.5338792341713,10.980014467647,1.50785222535437,14.2535942557667,15.5986428971502,10.1816141834184,10.058958310201,0.101839363850316,0.124406970610093,2.52722758433675,0.631325567659422,0.130120442962704,0.229902104433473,0,0,0.272145996605311,0.12811372028485,0.468508622798644,2.84573707812917,0,0.567318240503458,0.527853372491847,0.657587197282725,0.834141747676794,0.348252166522167,0.411564272815887,0.796137067273973,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0,0,0,0,15.7717461423095,1.54356918568927,0,0,0,0,0.257734922644187,0.403367049246685,0.22237804384487,0.380451252225118,0,0,0,0.198956472041151,0,0,0,0,1.51734320762465,0.685491075658373,1.1270773567308,0.203651327845314,0,0.561086559122548,0.442655759869801,0.442830443938806,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.488894929326078,0.339490171550376,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0.275936746304732,7.22477654945064,7.73597131508541,0,0,0,0.390438744296638,0,0,0,0,0.404810701674894,0.876767573733936,0.395287777946524,5.46246237917072,0,0.534196811001766,1.14020871547503,0.659880491890142,0,0.242780636154981,0,0.188605079755898,0,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0.680879211507576,0.36012218806262,0.776152102696527,0.643011105094777,1.95074257006501,1.96205699362278,2.30368628842969,1.8267896946876,1.40803024838226,0.42366414172764,0.441056796109924,0.32977250588296,0.484393280087717,0.180938774784468,0.238744688006273,0,0.291480836629851,8.34413859047294,0,0,0,0,0,0,0,0,0,1.90934123603023,0.790839983952838,0.406638934253697,0.216010681643603,0.209088296014469,0.436725127492355,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,20.856638731315,0.299033092087958,0.496375471371293,0.583353565032143,0.774958940866387,0.337912250981556,0.234714477291508,0.2604087696879,0.734015410979976,9.66336483304024,9.50499020650956,0,0,0.205421914329655,0,0.179026695667481,0,0.480781798079875,0,0.201932899896295,0.228620419965,0.100826185136841,0,0.0962118416403295,0,0.453460767230423,0,0,0,1.73870634628971,0.563047426353546,0.549454872801795,0,0,12.4245405375755,7.82552902062201,12.6037012956667,12.0297227640581,22.6077231524312,17.3740596399631,22.9507650078814,18.9134905354173,16.7662691324156,16.5683299760582,0.207574695168353,0.399024873401031,1.02440163452481,0,0,0.367687016900028,0.222246727801615,1.23621034343337,0.64183841918363,0.252697211763798,0.760437899670719,0.377252682772152,0.468207537349412,0.576226371643824,0.287177344778066,1.90517476513229,0.115884325944855,0,0,0.294397840268795,0.342869252385415,0.887379030796687,0.476872379894642,0.581385666529314,0.564656282491984,0.25384382367503,1.28049581010941,0.263069711437843,0.271608227691724,1.12228454331548,0.355905054372522,0.788035859004508,0.409231043169689,0,0.964533054905707,0.749431733813838,0.467863216890817,0.644613162144895,0.57386499620653,0.441182838239031,0.695603506861264
|short_description=p3@Gfra4
}}
}}

Latest revision as of 18:00, 25 September 2015

Short description:p3@Gfra4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Gfra4_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 57bp_to_ENSMUST00000074855_5end
EntrezGene:Gfra4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Gfra4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B79.39
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.80
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.63
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.39
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.95
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D320.92
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F311.49
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.68
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E413.96
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E513.51
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I613.90
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.19
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.17
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I22.51
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A411.53
corpus striatum, adult.CNhs10487.19-21D810.98
corpus striatum, neonate N00.CNhs11226.630-43F11.51
cortex, adult.CNhs10473.12-14D514.25
cortex, neonate N30.CNhs11107.1392-42F215.60
diencephalon, adult.CNhs10482.20-12F210.18
diencephalon, neonate N30.CNhs11201.1388-42B210.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B22.53
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E815.77
hippocampus, neonate N00.CNhs11228.627-43G11.54
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C27.22
medulla oblongata, neonate N30.CNhs11200.1396-42A37.74
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I95.46
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B91.95
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F52.30
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C98.34
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G520.86
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H39.66
testis, neonate N30.CNhs11130.1391-42E29.50
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.74
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.42
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.83
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.60
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D712.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A422.61
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A517.37
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A622.95
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A718.91
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A816.77
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A916.57
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.90e-1523
neuroblast (sensu Vertebrata)1.90e-1523
neuron2.89e-0933
neuronal stem cell2.89e-0933
neuroblast2.89e-0933
electrically signaling cell2.89e-0933
neural cell6.21e-0843
ectodermal cell1.23e-0744
neurectodermal cell1.23e-0744
electrically responsive cell3.92e-0739
electrically active cell3.92e-0739

Uber anatomy
Ontology termp-valuen
regional part of nervous system4.06e-3954
neural tube3.16e-3652
neural rod3.16e-3652
future spinal cord3.16e-3652
neural keel3.16e-3652
central nervous system1.97e-3573
nervous system4.02e-3475
brain3.64e-3047
future brain3.64e-3047
regional part of brain5.14e-2946
neurectoderm7.56e-2964
neural plate7.56e-2964
presumptive neural plate7.56e-2964
gray matter4.58e-2634
ectoderm-derived structure2.03e-2595
ectoderm2.03e-2595
presumptive ectoderm2.03e-2595
anterior neural tube2.43e-2440
ecto-epithelium8.39e-2473
regional part of forebrain4.38e-2339
forebrain4.38e-2339
future forebrain4.38e-2339
brain grey matter2.20e-2029
regional part of telencephalon2.20e-2029
telencephalon2.20e-2029
pre-chordal neural plate9.69e-2049
structure with developmental contribution from neural crest1.92e-1692
occipital lobe1.04e-1510
visual cortex1.04e-1510
neocortex1.04e-1510
posterior neural tube3.40e-1212
chordal neural plate3.40e-1212
cerebral cortex5.58e-1221
cerebral hemisphere5.58e-1221
pallium5.58e-1221
regional part of cerebral cortex1.43e-1117
tube4.67e-11114
anatomical conduit2.62e-10122
basal ganglion3.40e-108
nuclear complex of neuraxis3.40e-108
aggregate regional part of brain3.40e-108
collection of basal ganglia3.40e-108
cerebral subcortex3.40e-108
spinal cord2.97e-086
dorsal region element2.97e-086
dorsum2.97e-086
regional part of spinal cord4.60e-075
gray matter of spinal cord4.60e-075
regional part of midbrain5.32e-074
midbrain5.32e-074
presumptive midbrain5.32e-074
midbrain neural tube5.32e-074
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