FFCP PHASE1:Mm9::chr2:105515863..105515873,+: Difference between revisions
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|id=chr2:105515863..105515873,+
|short_description=p8@Pax6
|description=CAGE_peak_8_at_Pax6_5end
|association_with_transcript=-229bp_to_ENSMUST00000111083_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=18508 | |EntrezGene=18508 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2321 | |||
|TSSclassifier=NA | |||
|UniProt=P63015 | |UniProt=P63015 | ||
|association_with_transcript=-229bp_to_ENSMUST00000111083_5end | |||
|cluster_id=chr2:105515863..105515873,+ | |||
|description=CAGE_peak_8_at_Pax6_5end | |||
|id=chr2:105515863..105515873,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!2.49e-17!49;UBERON:0000033!7.99e-17!63;UBERON:0000970!2.41e-15!9;UBERON:0000019!2.41e-15!9;UBERON:0000047!2.41e-15!9;UBERON:0004088!2.41e-15!9;UBERON:0002104!2.41e-15!9;UBERON:0001456!2.41e-15!9;UBERON:0003072!2.41e-15!9;UBERON:0003071!2.41e-15!9;UBERON:0004128!2.41e-15!9;UBERON:0002346!5.45e-15!71;UBERON:0003075!5.45e-15!71;UBERON:0007284!5.45e-15!71;UBERON:0001444!4.23e-12!11;UBERON:0000020!6.91e-11!12;UBERON:0001032!6.91e-11!12;UBERON:0004456!6.91e-11!12;UBERON:0007811!6.27e-10!86;UBERON:0005085!7.30e-10!13;UBERON:0001049!1.16e-09!52;UBERON:0005068!1.16e-09!52;UBERON:0006241!1.16e-09!52;UBERON:0007135!1.16e-09!52;UBERON:0000955!2.76e-09!50;UBERON:0006238!2.76e-09!50;UBERON:0004121!3.67e-09!102;UBERON:0000924!3.67e-09!102;UBERON:0006601!3.67e-09!102;UBERON:0000153!4.21e-09!94;UBERON:0002616!1.54e-08!49;UBERON:0002780!2.99e-08!39;UBERON:0001890!2.99e-08!39;UBERON:0006240!2.99e-08!39;UBERON:0003080!6.29e-08!40;UBERON:0001264!4.09e-07!12;UBERON:0003922!4.09e-07!12;UBERON:0002114!4.09e-07!12;UBERON:0003923!4.09e-07!12;UBERON:0003924!4.09e-07!12;UBERON:0003921!4.09e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.21e-43,9;UBERON:0000019,1.21e-43,9;UBERON:0000047,1.21e-43,9;UBERON:0010312,1.21e-43,9;UBERON:0004088,1.21e-43,9;UBERON:0002104,1.21e-43,9;UBERON:0001456,1.21e-43,9;UBERON:0003072,1.21e-43,9;UBERON:0004128,1.21e-43,9;UBERON:0003071,1.21e-43,9;UBERON:0001444,1.09e-35,11;UBERON:0000020,1.05e-32,12;UBERON:0001032,1.05e-32,12;UBERON:0004456,1.05e-32,12;UBERON:0000033,3.54e-30,13;UBERON:0005085,3.54e-30,13;UBERON:0002346,1.88e-14,64;UBERON:0003075,1.88e-14,64;UBERON:0007284,1.88e-14,64;UBERON:0003056,1.10e-12,49;UBERON:0010371,1.39e-12,73;UBERON:0007811,1.03e-10,36;UBERON:0010314,7.96e-10,92;UBERON:0004121,1.73e-09,95;UBERON:0000924,1.73e-09,95;UBERON:0006601,1.73e-09,95;UBERON:0000153,6.67e-09,43;UBERON:0002037,7.64e-09,4;UBERON:0002680,7.64e-09,4;UBERON:0001895,7.64e-09,4;UBERON:0010092,7.64e-09,4;UBERON:0006215,7.64e-09,4 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0.841299845405528,0,0,0.122490799214954,0.0958454710182364,0,0,0,0,0.527545150920775,0.640413505216868,1.04182674111352,0.558365998002762,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17112318804619,2.09446706813455,0,0,0,0,0,0,0,0,0,0.20778804455956,0.324482526135515,0,0,0,5.05060454127538,1.69156575851515,0.919608417733892,2.16074555766419,3.16480117455002,3.26575195926374,1.15302348256365,0.843315521037559,2.84573707812917,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0.898819408654221,0,0.199141273254367,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0.728341908464944,0.302323556964751,0.754420319023592,0.295301892880773,0,0.516856586336442,0.363533729477506,0.712994756769443,0.316036757935816,0,0,0,1.62054984628179,0,0.214337035031592,0.177340233642274,0,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0.243106717068294,0,0,0,0.206035057238894,0,0,0.50695859978048,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0.115884325944855,0.38581844092741,0,0,0,0,0,0,0,0,0,0,0.271608227691724,0,0,0,0,0,0,0,0,0.644613162144895,0,0,0 | |phase1_expression=0,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0.841299845405528,0,0,0.122490799214954,0.0958454710182364,0,0,0,0,0.527545150920775,0.640413505216868,1.04182674111352,0.558365998002762,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17112318804619,2.09446706813455,0,0,0,0,0,0,0,0,0,0.20778804455956,0.324482526135515,0,0,0,5.05060454127538,1.69156575851515,0.919608417733892,2.16074555766419,3.16480117455002,3.26575195926374,1.15302348256365,0.843315521037559,2.84573707812917,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0.898819408654221,0,0.199141273254367,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0.728341908464944,0.302323556964751,0.754420319023592,0.295301892880773,0,0.516856586336442,0.363533729477506,0.712994756769443,0.316036757935816,0,0,0,1.62054984628179,0,0.214337035031592,0.177340233642274,0,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0.243106717068294,0,0,0,0.206035057238894,0,0,0.50695859978048,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0.115884325944855,0.38581844092741,0,0,0,0,0,0,0,0,0,0,0.271608227691724,0,0,0,0,0,0,0,0,0.644613162144895,0,0,0 | ||
|short_description=p8@Pax6 | |||
}} | }} |
Latest revision as of 22:25, 1 October 2015
Short description: | p8@Pax6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Pax6_5end |
Coexpression cluster: | MCL_coexpression_mm9:2321 |
Association with transcript: | -229bp_to_ENSMUST00000111083_5end |
EntrezGene: | Pax6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 1.21e-43 | 9 |
camera-type eye | 1.21e-43 | 9 |
simple eye | 1.21e-43 | 9 |
immature eye | 1.21e-43 | 9 |
ocular region | 1.21e-43 | 9 |
visual system | 1.21e-43 | 9 |
face | 1.21e-43 | 9 |
optic cup | 1.21e-43 | 9 |
optic vesicle | 1.21e-43 | 9 |
eye primordium | 1.21e-43 | 9 |
subdivision of head | 1.09e-35 | 11 |
sense organ | 1.05e-32 | 12 |
sensory system | 1.05e-32 | 12 |
entire sense organ system | 1.05e-32 | 12 |
head | 3.54e-30 | 13 |
ectodermal placode | 3.54e-30 | 13 |
neurectoderm | 1.88e-14 | 64 |
neural plate | 1.88e-14 | 64 |
presumptive neural plate | 1.88e-14 | 64 |
pre-chordal neural plate | 1.10e-12 | 49 |
ecto-epithelium | 1.39e-12 | 73 |
craniocervical region | 1.03e-10 | 36 |
structure with developmental contribution from neural crest | 7.96e-10 | 92 |
ectoderm-derived structure | 1.73e-09 | 95 |
ectoderm | 1.73e-09 | 95 |
presumptive ectoderm | 1.73e-09 | 95 |
anterior region of body | 6.67e-09 | 43 |
cerebellum | 7.64e-09 | 4 |
regional part of metencephalon | 7.64e-09 | 4 |
metencephalon | 7.64e-09 | 4 |
future metencephalon | 7.64e-09 | 4 |
rhombic lip | 7.64e-09 | 4 |