FFCP PHASE1:Mm9::chr1:36162547..36162577,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:36162547..36162577,+
|short_description=p@chr1:36162547..36162577,+
|description=CAGE_peak_at_chr1:36162547..36162577,+
|association_with_transcript=NA
|E...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=128 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:36162547..36162577,+ | |||
|description=CAGE_peak_at_chr1:36162547..36162577,+ | |||
|id=chr1:36162547..36162577,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.44e-07!50;CL:0002321!6.33e-07!70;CL:0000220!6.33e-07!70;CL:0000117!7.62e-07!23;CL:0000337!7.62e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.31e-18,5;CL:0002603,1.31e-11,2;CL:0002321,3.78e-09,70;CL:0000128,2.60e-08,6;CL:0000126,2.60e-08,6;CL:0000127,2.60e-08,6;CL:0002612,1.29e-07,3;CL:0000219,7.32e-07,54;CL:0002319,9.76e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,1.27e-10,12;UBERON:0003057,1.27e-10,12;UBERON:0001948,1.34e-09,5;UBERON:0002315,1.34e-09,5;UBERON:0002107,1.28e-08,22;UBERON:0007499,1.28e-08,22;UBERON:0006925,1.28e-08,22;UBERON:0009497,1.28e-08,22;UBERON:0000015,1.28e-08,22;UBERON:0002423,1.28e-08,22;UBERON:0006235,1.28e-08,22;UBERON:0008835,1.28e-08,22;UBERON:0003894,1.28e-08,22;UBERON:0004161,1.28e-08,22;UBERON:0008836,1.28e-08,22;UBERON:0000025,2.42e-08,114;UBERON:0009854,3.18e-08,23;UBERON:0009856,3.18e-08,23;UBERON:0002240,4.37e-08,6;UBERON:0005174,4.37e-08,6;UBERON:0001137,4.37e-08,6;UBERON:0004111,1.19e-07,122;UBERON:0002257,1.29e-07,3;UBERON:0002365,1.58e-07,25;UBERON:0002330,1.58e-07,25;UBERON:0001049,8.40e-07,52;UBERON:0005068,8.40e-07,52;UBERON:0006241,8.40e-07,52;UBERON:0007135,8.40e-07,52 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0.90739263392049,0,0.33575854382378,0.233612640595526,0,0,0,0,0.239316476986009,0,0.262261207256992,0.333109761815663,0.404950534779652,1.39912375625629,0.473193248037357,0,0.42438965179803,0.17008658030214,0.0992909512008853,0,0.47997726838022,0.68822784320151,0,0,0,0.760093677825496,0.252030129759931,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.881277725829041,0.709638518536602,0,2.34717403304412,1.52617609466313,1.09843091367236,0.972149495371417,0,0,0,0.725362142011344,0,0.257259436035947,0,0.515672092277442,0.809265843438391,1.5869729378161,0.633831403506179,0,0,0.899899717281399,0,0,0.299600110518405,0.384218305321555,0.311068836925433,0.945041568321835,0,0.571301968807607,1.32521124570968,0,0.479227355091182,0.919218786610021,0,0.127687338085188,0.153606533256243,0.659431438650969,1.64677758484337,0.52091337055676,0.558365998002762,0,0.30559649555362,1.47314292736834,1.13897344639282,0.559198337475902,0.075726193333184,0.151143120213571,0,1.72084775396277,4.75979933595425,2.15881276655127,11.695975514058,2.68816132258401,0,0,0,0.35333957451034,0,0,0,0,0.649473123033642,0.506719730950197,0,0.22836775943812,0.258937883647172,0,0.173485326766136,0.608930956624282,0,0.150722640552623,0.587943535678524,0.251333182659351,0.494389935468748,0,0,0.161766849947409,0,0.969750506270444,0,0,0.209446706813455,0.255457055208591,0.11981512450592,0,0.127070227073065,0.149790639404823,0,0,0,0,0,0,0.305518091550949,0.124406970610093,0,0,0,0.459804208866946,0,0.452114453507145,0.204109497453984,0.12811372028485,0.0937017245597288,0,0,0,0.175951124163949,0,0.556094498451196,0,0,0.398068533636986,0,0,0,0,0,0.900310307305074,0,0,0.308534225774757,0,0,0.116765342367169,0.16455984991348,0,0,0.146199987425332,0.219550115291051,0.268412837520744,0.210289948564127,0.308713837137853,0,0.264450566663544,0,0,0,0.201683524623343,0,0,0,0,0.502670417600539,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0.442655759869801,0.147610147979602,0.156998727841375,0.493588655687202,0.592905254174298,0.333690211432188,0,0.224862112384854,0.202860121388503,0,0,0.287696137450811,0.486405680325106,0.549122826376163,4.31304619582064,0.372140947668503,0.312037673114561,0.252578877947112,0,0.482443521363367,0,0,0,0,0.234690248288502,0,0,0,0.315270288212382,0.221464689648775,0,0,0,0.144649058581512,0,0,0.491764273019036,0.275936746304732,0,0,0.163934945376675,0,0,0,0,0,0.222798674082394,0.283076530788832,0,0.292255857911312,0,0,0.141940085208269,0.178065603667255,0,0.329940245945071,0,0,0.302323556964751,0.188605079755898,0,0.307435147943927,0.258428293168221,0.363533729477506,0,0,0,0,0,0,0.129358683782755,0,0.354680467284547,0.178368817602071,0.164549020602121,0.304464949114599,0,0.42366414172764,0,0.16488625294148,0,0.120625849856312,0.238744688006273,0.164140899745061,0,0,0,0.206386867963223,0.185194527369712,0.753473828018764,0.546776910884101,0,0.169978429993855,0.139951452323658,0.414599921413271,0,0.316335993581135,0.203319467126849,0.108005340821801,0,0,0,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0.448549638131936,0.165458490457098,0,0.129159823477731,0.675824501963113,0.117357238645754,0.13020438484395,0,0.483168241652012,0,0,0,0.308132871494482,0.129920822977795,0,0,0.240390899039938,0.590758108698309,0,0.381034033274999,0.201652370273681,0,0.192423683280659,0.116876902181569,0,0,0.0897138566094757,0,0,0,0,0,0,0,1.38097570952153,0.572895513439397,1.20297227640581,0,0,0.675022500231806,0,0.453142408984205,0,0.103787347584177,0,0.512200817262403,0,0.419226325255965,0,0.222246727801615,0,0,0.758091635291392,0,0,0.37456602987953,0.0640251524048693,0.114870937911227,0,0,0.192909220463705,0.824171801606613,0,0,0.177475806159338,0,0.290692833264657,0,0.25384382367503,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0.197008964751127,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.160148847104794,0.348975407639361,0,0.90739263392049,0,0.33575854382378,0.233612640595526,0,0,0,0,0.239316476986009,0,0.262261207256992,0.333109761815663,0.404950534779652,1.39912375625629,0.473193248037357,0,0.42438965179803,0.17008658030214,0.0992909512008853,0,0.47997726838022,0.68822784320151,0,0,0,0.760093677825496,0.252030129759931,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.881277725829041,0.709638518536602,0,2.34717403304412,1.52617609466313,1.09843091367236,0.972149495371417,0,0,0,0.725362142011344,0,0.257259436035947,0,0.515672092277442,0.809265843438391,1.5869729378161,0.633831403506179,0,0,0.899899717281399,0,0,0.299600110518405,0.384218305321555,0.311068836925433,0.945041568321835,0,0.571301968807607,1.32521124570968,0,0.479227355091182,0.919218786610021,0,0.127687338085188,0.153606533256243,0.659431438650969,1.64677758484337,0.52091337055676,0.558365998002762,0,0.30559649555362,1.47314292736834,1.13897344639282,0.559198337475902,0.075726193333184,0.151143120213571,0,1.72084775396277,4.75979933595425,2.15881276655127,11.695975514058,2.68816132258401,0,0,0,0.35333957451034,0,0,0,0,0.649473123033642,0.506719730950197,0,0.22836775943812,0.258937883647172,0,0.173485326766136,0.608930956624282,0,0.150722640552623,0.587943535678524,0.251333182659351,0.494389935468748,0,0,0.161766849947409,0,0.969750506270444,0,0,0.209446706813455,0.255457055208591,0.11981512450592,0,0.127070227073065,0.149790639404823,0,0,0,0,0,0,0.305518091550949,0.124406970610093,0,0,0,0.459804208866946,0,0.452114453507145,0.204109497453984,0.12811372028485,0.0937017245597288,0,0,0,0.175951124163949,0,0.556094498451196,0,0,0.398068533636986,0,0,0,0,0,0.900310307305074,0,0,0.308534225774757,0,0,0.116765342367169,0.16455984991348,0,0,0.146199987425332,0.219550115291051,0.268412837520744,0.210289948564127,0.308713837137853,0,0.264450566663544,0,0,0,0.201683524623343,0,0,0,0,0.502670417600539,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0.442655759869801,0.147610147979602,0.156998727841375,0.493588655687202,0.592905254174298,0.333690211432188,0,0.224862112384854,0.202860121388503,0,0,0.287696137450811,0.486405680325106,0.549122826376163,4.31304619582064,0.372140947668503,0.312037673114561,0.252578877947112,0,0.482443521363367,0,0,0,0,0.234690248288502,0,0,0,0.315270288212382,0.221464689648775,0,0,0,0.144649058581512,0,0,0.491764273019036,0.275936746304732,0,0,0.163934945376675,0,0,0,0,0,0.222798674082394,0.283076530788832,0,0.292255857911312,0,0,0.141940085208269,0.178065603667255,0,0.329940245945071,0,0,0.302323556964751,0.188605079755898,0,0.307435147943927,0.258428293168221,0.363533729477506,0,0,0,0,0,0,0.129358683782755,0,0.354680467284547,0.178368817602071,0.164549020602121,0.304464949114599,0,0.42366414172764,0,0.16488625294148,0,0.120625849856312,0.238744688006273,0.164140899745061,0,0,0,0.206386867963223,0.185194527369712,0.753473828018764,0.546776910884101,0,0.169978429993855,0.139951452323658,0.414599921413271,0,0.316335993581135,0.203319467126849,0.108005340821801,0,0,0,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0.448549638131936,0.165458490457098,0,0.129159823477731,0.675824501963113,0.117357238645754,0.13020438484395,0,0.483168241652012,0,0,0,0.308132871494482,0.129920822977795,0,0,0.240390899039938,0.590758108698309,0,0.381034033274999,0.201652370273681,0,0.192423683280659,0.116876902181569,0,0,0.0897138566094757,0,0,0,0,0,0,0,1.38097570952153,0.572895513439397,1.20297227640581,0,0,0.675022500231806,0,0.453142408984205,0,0.103787347584177,0,0.512200817262403,0,0.419226325255965,0,0.222246727801615,0,0,0.758091635291392,0,0,0.37456602987953,0.0640251524048693,0.114870937911227,0,0,0.192909220463705,0.824171801606613,0,0,0.177475806159338,0,0.290692833264657,0,0.25384382367503,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0.197008964751127,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:36162547..36162577,+ | |||
}} | }} |
Latest revision as of 14:31, 5 August 2015
Short description: | p@chr1:36162547..36162577, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:36162547..36162577, + |
Coexpression cluster: | MCL_coexpression_mm9:128 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.31e-18 | 5 |
astrocyte of the cerebellum | 1.31e-11 | 2 |
embryonic cell | 3.78e-09 | 70 |
oligodendrocyte | 2.60e-08 | 6 |
macroglial cell | 2.60e-08 | 6 |
astrocyte | 2.60e-08 | 6 |
neuron of the ventral spinal cord | 1.29e-07 | 3 |
motile cell | 7.32e-07 | 54 |
neural cell | 9.76e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
posterior neural tube | 1.27e-10 | 12 |
chordal neural plate | 1.27e-10 | 12 |
regional part of spinal cord | 1.34e-09 | 5 |
gray matter of spinal cord | 1.34e-09 | 5 |
liver | 1.28e-08 | 22 |
epithelial sac | 1.28e-08 | 22 |
digestive gland | 1.28e-08 | 22 |
epithelium of foregut-midgut junction | 1.28e-08 | 22 |
anatomical boundary | 1.28e-08 | 22 |
hepatobiliary system | 1.28e-08 | 22 |
foregut-midgut junction | 1.28e-08 | 22 |
hepatic diverticulum | 1.28e-08 | 22 |
liver primordium | 1.28e-08 | 22 |
septum transversum | 1.28e-08 | 22 |
liver bud | 1.28e-08 | 22 |
tube | 2.42e-08 | 114 |
digestive tract diverticulum | 3.18e-08 | 23 |
sac | 3.18e-08 | 23 |
spinal cord | 4.37e-08 | 6 |
dorsal region element | 4.37e-08 | 6 |
dorsum | 4.37e-08 | 6 |
anatomical conduit | 1.19e-07 | 122 |
ventral horn of spinal cord | 1.29e-07 | 3 |
exocrine gland | 1.58e-07 | 25 |
exocrine system | 1.58e-07 | 25 |
neural tube | 8.40e-07 | 52 |
neural rod | 8.40e-07 | 52 |
future spinal cord | 8.40e-07 | 52 |
neural keel | 8.40e-07 | 52 |