FFCP PHASE1:Mm9::chr1:165992178..165992189,+: Difference between revisions
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|id=chr1:165992178..165992189,+
|short_description=p4@Sell
|description=CAGE_peak_4_at_Sell_5end
|association_with_transcript=-17bp_to_ENSMUST00000027871,ENSMUST000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=20343 | |EntrezGene=20343 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=821 | |||
|TSSclassifier=NA | |||
|UniProt=P18337,Q3TCF3,E9Q5W7,Q3UV83 | |UniProt=P18337,Q3TCF3,E9Q5W7,Q3UV83 | ||
|association_with_transcript=-17bp_to_ENSMUST00000027871,ENSMUST00000097491,ENSMUST00000167117,NM_001164059,NM_011346,uc007dhy.2,uc011wuv.1_5end | |||
|cluster_id=chr1:165992178..165992189,+ | |||
|description=CAGE_peak_4_at_Sell_5end | |||
|id=chr1:165992178..165992189,+ | |||
|ontology_enrichment_celltype=CL:0000988!3.00e-13!32;CL:0002032!3.00e-13!32;CL:0000037!3.00e-13!32;CL:0000566!3.00e-13!32;CL:0000837!3.00e-13!32;CL:0000791!2.80e-09!9;CL:0000789!2.80e-09!9;CL:0002420!2.80e-09!9;CL:0002419!2.80e-09!9;CL:0000790!2.80e-09!9;CL:0002031!6.32e-09!25;CL:0000838!3.33e-08!12;CL:0000624!3.38e-08!8;CL:0000553!4.99e-08!6;CL:0000556!4.99e-08!6;CL:0000542!2.33e-07!13;CL:0000051!2.33e-07!13;CL:0000049!3.26e-07!19;CL:0000084!3.71e-07!11;CL:0000827!3.71e-07!11;CL:0002320!4.33e-07!46;CL:0000134!4.33e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.08e-17,32;CL:0002032,1.08e-17,32;CL:0000037,1.08e-17,32;CL:0000837,1.08e-17,32;CL:0002031,2.41e-14,25;CL:0000553,4.32e-14,6;CL:0000556,4.32e-14,6;CL:0002320,1.94e-11,46;CL:0000134,1.94e-11,46;CL:0000049,4.85e-10,19;CL:0000034,1.29e-09,97;CL:0000838,1.43e-09,12;CL:0000219,2.52e-09,54;CL:0000050,2.71e-09,9;CL:0000791,4.03e-09,9;CL:0000789,4.03e-09,9;CL:0002420,4.03e-09,9;CL:0002419,4.03e-09,9;CL:0000790,4.03e-09,9;CL:0000542,8.71e-09,13;CL:0000051,8.71e-09,13;CL:0000084,2.09e-07,11;CL:0000827,2.09e-07,11;CL:0000723,4.49e-07,91;CL:0000048,4.49e-07,91;CL:0000763,6.43e-07,16;CL:0000624,7.24e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.19e-10,3;DOID:4045,4.19e-10,3 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.03e-22!48;UBERON:0002390!9.27e-22!45;UBERON:0003061!9.27e-22!45;UBERON:0004177!1.61e-18!29;UBERON:0002405!2.34e-15!70;UBERON:0002370!7.20e-14!23;UBERON:0000974!7.20e-14!23;UBERON:0004807!7.20e-14!23;UBERON:0005058!7.20e-14!23;UBERON:0003351!7.20e-14!23;UBERON:0009113!7.20e-14!23;UBERON:0003295!7.20e-14!23;UBERON:0009722!7.20e-14!23;UBERON:0005562!7.20e-14!23;UBERON:0007690!7.20e-14!23;UBERON:0006562!4.98e-13!24;UBERON:0003408!4.98e-13!24;UBERON:0001557!4.98e-13!24;UBERON:0001042!4.98e-13!24;UBERON:0008814!4.98e-13!24;UBERON:0009145!4.98e-13!24;UBERON:0000072!6.71e-11!27;UBERON:0005057!2.81e-10!51;UBERON:0000065!3.47e-10!41;UBERON:0001004!9.14e-10!42;UBERON:0003081!2.31e-09!88;UBERON:0000063!4.20e-07!35;UBERON:0002384!4.33e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.94e-11,46;UBERON:0002193,2.07e-07,48;UBERON:0002405,2.07e-07,48;UBERON:0002371,6.43e-07,16;UBERON:0002204,8.38e-07,32 | |||
|phase1_expression=0,0,0,0,0,0,0,6.06879620175408,0.281577444303333,0.70219357896598,0.171217968225505,0.159544317990673,2.56801094896809,3.67165690159789,2.33176833270964,3.23960427823721,0.699561878128147,6.46697438984387,8.91243818437302,6.79023442876848,0,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34825304589526,2.3440060335714,3.14114246384279,3.52938892818609,5.46436387966757,1.45653105909346,0,0,0,0,0,0,0,0,0,5.03347818173209,3.62681071005672,3.36093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.5709193985953,10.0985774622397,0,0,0,0,0,0.23517741427141,0,0,0.144599356919912,0,0,0,0.969750506270444,0,0,0,0,6.4700167233197,0.599902730993408,2.79554499560742,0,0,0,0,0,0,0,0,0.995255764880744,0,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0.702213187313235,0.772043721344145,1.42081749697796,0,0,0,0,0,0.308534225774757,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0.31399745568275,0,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,1.84753190166605,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.327726629431476,0.172684981865896,0.289298117163023,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,1.36696704638282,0.206386867963223,0.185194527369712,0.565105371014073,1.50363650493128,0.686334519619568,3.0596117398894,3.49878630809145,2.3493995546752,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0.632022241256357,0.810900861160657,1.43795340030758,0.51968329191118,0.358053391334963,0.198681354781265,0.841368146639782,0.886137163047463,0.403865799792591,0.990688486514998,0.504130925684203,0.38983152295901,0.384847366561318,0.350630706544707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0,0,6.06879620175408,0.281577444303333,0.70219357896598,0.171217968225505,0.159544317990673,2.56801094896809,3.67165690159789,2.33176833270964,3.23960427823721,0.699561878128147,6.46697438984387,8.91243818437302,6.79023442876848,0,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34825304589526,2.3440060335714,3.14114246384279,3.52938892818609,5.46436387966757,1.45653105909346,0,0,0,0,0,0,0,0,0,5.03347818173209,3.62681071005672,3.36093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.5709193985953,10.0985774622397,0,0,0,0,0,0.23517741427141,0,0,0.144599356919912,0,0,0,0.969750506270444,0,0,0,0,6.4700167233197,0.599902730993408,2.79554499560742,0,0,0,0,0,0,0,0,0.995255764880744,0,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0.702213187313235,0.772043721344145,1.42081749697796,0,0,0,0,0,0.308534225774757,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0.31399745568275,0,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,1.84753190166605,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.327726629431476,0.172684981865896,0.289298117163023,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,1.36696704638282,0.206386867963223,0.185194527369712,0.565105371014073,1.50363650493128,0.686334519619568,3.0596117398894,3.49878630809145,2.3493995546752,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0.632022241256357,0.810900861160657,1.43795340030758,0.51968329191118,0.358053391334963,0.198681354781265,0.841368146639782,0.886137163047463,0.403865799792591,0.990688486514998,0.504130925684203,0.38983152295901,0.384847366561318,0.350630706544707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | ||
|short_description=p4@Sell | |||
}} | }} |
Latest revision as of 16:43, 26 September 2015
Short description: | p4@Sell |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Sell_5end |
Coexpression cluster: | MCL_coexpression_mm9:821 |
Association with transcript: | -17bp_to_ENSMUST00000027871, ENSMUST00000097491, ENSMUST00000167117, NM_001164059, NM_011346, uc007dhy.2, uc011wuv.1_5end |
EntrezGene: | Sell |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.08e-17 | 32 |
hematopoietic oligopotent progenitor cell | 1.08e-17 | 32 |
hematopoietic stem cell | 1.08e-17 | 32 |
hematopoietic multipotent progenitor cell | 1.08e-17 | 32 |
hematopoietic lineage restricted progenitor cell | 2.41e-14 | 25 |
megakaryocyte progenitor cell | 4.32e-14 | 6 |
megakaryocyte | 4.32e-14 | 6 |
connective tissue cell | 1.94e-11 | 46 |
mesenchymal cell | 1.94e-11 | 46 |
common myeloid progenitor | 4.85e-10 | 19 |
stem cell | 1.29e-09 | 97 |
lymphoid lineage restricted progenitor cell | 1.43e-09 | 12 |
motile cell | 2.52e-09 | 54 |
megakaryocyte-erythroid progenitor cell | 2.71e-09 | 9 |
mature alpha-beta T cell | 4.03e-09 | 9 |
alpha-beta T cell | 4.03e-09 | 9 |
immature T cell | 4.03e-09 | 9 |
mature T cell | 4.03e-09 | 9 |
immature alpha-beta T cell | 4.03e-09 | 9 |
lymphocyte | 8.71e-09 | 13 |
common lymphoid progenitor | 8.71e-09 | 13 |
T cell | 2.09e-07 | 11 |
pro-T cell | 2.09e-07 | 11 |
somatic stem cell | 4.49e-07 | 91 |
multi fate stem cell | 4.49e-07 | 91 |
myeloid cell | 6.43e-07 | 16 |
CD4-positive, alpha-beta T cell | 7.24e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.94e-11 | 46 |
hemolymphoid system | 2.07e-07 | 48 |
immune system | 2.07e-07 | 48 |
bone marrow | 6.43e-07 | 16 |
musculoskeletal system | 8.38e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 4.19e-10 | 3 |
muscle cancer | 4.19e-10 | 3 |