FFCP PHASE1:Mm9::chr19:5560600..5560617,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:5560600..5560617,-
|short_description=p1@Ovol1
|description=CAGE_peak_1_at_Ovol1_5end
|association_with_transcript=-25bp_to_ENSMUST00000025861,NM_019935,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=18426 | |EntrezGene=18426 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=728 | |||
|TSSclassifier=NA | |||
|UniProt=Q9WTJ2 | |UniProt=Q9WTJ2 | ||
|association_with_transcript=-25bp_to_ENSMUST00000025861,NM_019935,uc008gdu.1_5end | |||
|cluster_id=chr19:5560600..5560617,- | |||
|description=CAGE_peak_1_at_Ovol1_5end | |||
|id=chr19:5560600..5560617,- | |||
|ontology_enrichment_celltype=CL:0002563!2.38e-07!9;CL:0002251!2.38e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.46e-08,9;CL:0002251,2.46e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.25e-20!59;UBERON:0000160!2.57e-19!43;UBERON:0001007!4.45e-12!128;UBERON:0001555!4.45e-12!128;UBERON:0007026!4.45e-12!128;UBERON:0004119!9.84e-12!130;UBERON:0000925!9.84e-12!130;UBERON:0006595!9.84e-12!130;UBERON:0004921!2.96e-11!126;UBERON:0004185!2.96e-11!126;UBERON:0000344!1.19e-10!15;UBERON:0001242!1.04e-09!13;UBERON:0000060!1.04e-09!13;UBERON:0001262!1.04e-09!13;UBERON:0004786!1.04e-09!13;UBERON:0003350!2.38e-07!9;UBERON:0004808!2.38e-07!9;UBERON:0001277!2.38e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.10e-20,47;UBERON:0000160,3.07e-20,31;UBERON:0000344,3.43e-12,15;UBERON:0001242,4.31e-11,13;UBERON:0001262,4.31e-11,13;UBERON:0004786,4.31e-11,13;UBERON:0003350,2.46e-08,9;UBERON:0004808,2.46e-08,9;UBERON:0001277,2.46e-08,9;UBERON:0001007,1.35e-07,116;UBERON:0001555,1.35e-07,116;UBERON:0007026,1.35e-07,116;UBERON:0004119,3.69e-07,118;UBERON:0000925,3.69e-07,118;UBERON:0006595,3.69e-07,118;UBERON:0004921,6.85e-07,114 | |||
|phase1_expression=0,45.7157784007563,27.7549536027617,60.7953064726728,69.6245064625423,31.7291823913472,29.6688053556318,0,0.422366166455,4.21316147379588,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,11.0394771727451,15.3704218315004,31.5827580263261,16.3689558540448,26.7184328530502,23.9429508515031,24.6989527164732,12.1951780860418,0,0,0,25.7077941578634,15.9585259544153,33.0754357145038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31891590961342,0,0,0,0,0,2.66844398250329,0,0,0,0.281686839553361,0,0,0,4.11332977921307,3.80039798212648,4.54972000513305,4.5673551887624,0,0,0.520455980298408,0,0.461230994512117,0,0,0,1.97755974187499,0,0,0,0,0,37.2783522436244,0,0,25.034791410442,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0.124406970610093,1.26361379216837,6.52369753248069,0.390361328888111,0.459804208866946,0.720248519221397,2.41127708537144,0.204109497453984,0.12811372028485,0.562210347358373,2.06962696591213,0.646703978798527,0.756424320671277,0.703804496655795,3.72632745126877,16.4047877043103,47.3622946470147,39.0986059175093,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,78.6396703501439,33.056320832943,1.2797295032114,1.39342003116263,8.50525244725816,10.0841762311671,7.56085349072559,8.3699275489526,18.9811624617805,9.38784041926862,5.52937459360593,4.97391180102877,5.65395852645448,27.8634016682809,19.0201483889731,25.8883655230677,4.36236172192088,2.97046132785295,10.1436962105772,5.7022371796688,6.98228953803453,4.27828501330943,2.71917109634306,1.32849133181642,1.41298855057237,1.48076596706161,0,0,0,0,0.202860121388503,0,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0,0,0.739012760666419,0.37898282354097,0.488894929326078,0.678980343100753,1.17345124144251,1.84256883185997,2.14239276797412,2.34160377429359,0.630540576424764,0.221464689648775,0.159454768657487,4.42430949732493,0.863424909329478,0.578596234326046,0,0,4.91764273019036,3.31124095565679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.890328018336276,1.79175655288934,1.15479086080775,5.30980553359851,0.728341908464944,3.02323556964751,5.65815239267694,8.85905678642318,5.84126781093462,2.84271122485043,1.09060118843252,0.356497378384721,2.84433082142234,3.16255825724996,3.09406629744561,0,0.540183282093931,0.776152102696527,1.28602221018955,0.354680467284547,0.891844088010353,0.164549020602121,0.304464949114599,0,0.42366414172764,2.42581237860458,48.8063308706781,35.1992450197074,37.2130746806722,73.4139915619289,84.2042815692164,19.5292160542,0,0,0.82554747185289,0,0,0,0,0,0,0,29.5947891584685,1.10717597753397,7.72613975082025,14.7967316925868,29.0632731460112,27.9504081595107,18.7461441474901,11.7367907129977,24.0815466625307,22.2937754061884,1.86401793926078,0,0,0,0,0,0,0.117357238645754,0,0.419437377702843,0.966336483304024,0.576060012515731,0,2.22997736819181,2.15693010046137,2.20865399062252,1.61124026100733,1.98681354781265,0.961563596159751,0.147689527174577,0.100966449948148,0.15241361331,0.302478555410522,0.682205165178267,0.962118416403295,0.350630706544707,72.3269923732524,0,0.0897138566094757,0.167884616364078,6.56844619709447,1.31377732815827,3.11357761254351,65.8110923772732,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0.399024873401031,1.02440163452481,6.56388136084394,1.88651846365184,5.69914876195044,3.11145418922261,4.12070114477788,2.56735367673452,4.54854981174835,1.77435509923168,2.82939512079114,3.93294331373506,3.20125762024346,3.15895079255873,2.38146845641537,3.59241410429052,3.47236596834669,4.94503080963968,3.82717192349433,2.40008476669791,4.2594193478241,3.09967046931517,3.77900683244054,3.95259397744389,4.06150117880047,3.47563148458268,3.6829759601298,3.80251518768413,8.41713407486608,4.38949567059444,3.05363895364247,1.63692417267876,2.32405261778949,12.7318363247553,19.7350356570977,12.3983752476066,12.0327790267047,6.12122662620299,13.8972594045295,0.463735671240843 | |phase1_expression=0,45.7157784007563,27.7549536027617,60.7953064726728,69.6245064625423,31.7291823913472,29.6688053556318,0,0.422366166455,4.21316147379588,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,11.0394771727451,15.3704218315004,31.5827580263261,16.3689558540448,26.7184328530502,23.9429508515031,24.6989527164732,12.1951780860418,0,0,0,25.7077941578634,15.9585259544153,33.0754357145038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31891590961342,0,0,0,0,0,2.66844398250329,0,0,0,0.281686839553361,0,0,0,4.11332977921307,3.80039798212648,4.54972000513305,4.5673551887624,0,0,0.520455980298408,0,0.461230994512117,0,0,0,1.97755974187499,0,0,0,0,0,37.2783522436244,0,0,25.034791410442,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0.124406970610093,1.26361379216837,6.52369753248069,0.390361328888111,0.459804208866946,0.720248519221397,2.41127708537144,0.204109497453984,0.12811372028485,0.562210347358373,2.06962696591213,0.646703978798527,0.756424320671277,0.703804496655795,3.72632745126877,16.4047877043103,47.3622946470147,39.0986059175093,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,78.6396703501439,33.056320832943,1.2797295032114,1.39342003116263,8.50525244725816,10.0841762311671,7.56085349072559,8.3699275489526,18.9811624617805,9.38784041926862,5.52937459360593,4.97391180102877,5.65395852645448,27.8634016682809,19.0201483889731,25.8883655230677,4.36236172192088,2.97046132785295,10.1436962105772,5.7022371796688,6.98228953803453,4.27828501330943,2.71917109634306,1.32849133181642,1.41298855057237,1.48076596706161,0,0,0,0,0.202860121388503,0,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0,0,0.739012760666419,0.37898282354097,0.488894929326078,0.678980343100753,1.17345124144251,1.84256883185997,2.14239276797412,2.34160377429359,0.630540576424764,0.221464689648775,0.159454768657487,4.42430949732493,0.863424909329478,0.578596234326046,0,0,4.91764273019036,3.31124095565679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.890328018336276,1.79175655288934,1.15479086080775,5.30980553359851,0.728341908464944,3.02323556964751,5.65815239267694,8.85905678642318,5.84126781093462,2.84271122485043,1.09060118843252,0.356497378384721,2.84433082142234,3.16255825724996,3.09406629744561,0,0.540183282093931,0.776152102696527,1.28602221018955,0.354680467284547,0.891844088010353,0.164549020602121,0.304464949114599,0,0.42366414172764,2.42581237860458,48.8063308706781,35.1992450197074,37.2130746806722,73.4139915619289,84.2042815692164,19.5292160542,0,0,0.82554747185289,0,0,0,0,0,0,0,29.5947891584685,1.10717597753397,7.72613975082025,14.7967316925868,29.0632731460112,27.9504081595107,18.7461441474901,11.7367907129977,24.0815466625307,22.2937754061884,1.86401793926078,0,0,0,0,0,0,0.117357238645754,0,0.419437377702843,0.966336483304024,0.576060012515731,0,2.22997736819181,2.15693010046137,2.20865399062252,1.61124026100733,1.98681354781265,0.961563596159751,0.147689527174577,0.100966449948148,0.15241361331,0.302478555410522,0.682205165178267,0.962118416403295,0.350630706544707,72.3269923732524,0,0.0897138566094757,0.167884616364078,6.56844619709447,1.31377732815827,3.11357761254351,65.8110923772732,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0.399024873401031,1.02440163452481,6.56388136084394,1.88651846365184,5.69914876195044,3.11145418922261,4.12070114477788,2.56735367673452,4.54854981174835,1.77435509923168,2.82939512079114,3.93294331373506,3.20125762024346,3.15895079255873,2.38146845641537,3.59241410429052,3.47236596834669,4.94503080963968,3.82717192349433,2.40008476669791,4.2594193478241,3.09967046931517,3.77900683244054,3.95259397744389,4.06150117880047,3.47563148458268,3.6829759601298,3.80251518768413,8.41713407486608,4.38949567059444,3.05363895364247,1.63692417267876,2.32405261778949,12.7318363247553,19.7350356570977,12.3983752476066,12.0327790267047,6.12122662620299,13.8972594045295,0.463735671240843 | ||
|short_description=p1@Ovol1 | |||
}} | }} |
Latest revision as of 23:49, 25 September 2015
Short description: | p1@Ovol1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ovol1_5end |
Coexpression cluster: | MCL_coexpression_mm9:728 |
Association with transcript: | -25bp_to_ENSMUST00000025861, NM_019935, uc008gdu.1_5end |
EntrezGene: | Ovol1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.46e-08 | 9 |
epithelial cell of alimentary canal | 2.46e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.10e-20 | 47 |
intestine | 3.07e-20 | 31 |
mucosa | 3.43e-12 | 15 |
intestinal mucosa | 4.31e-11 | 13 |
wall of intestine | 4.31e-11 | 13 |
gastrointestinal system mucosa | 4.31e-11 | 13 |
epithelium of mucosa | 2.46e-08 | 9 |
gastrointestinal system epithelium | 2.46e-08 | 9 |
intestinal epithelium | 2.46e-08 | 9 |
digestive system | 1.35e-07 | 116 |
digestive tract | 1.35e-07 | 116 |
primitive gut | 1.35e-07 | 116 |
endoderm-derived structure | 3.69e-07 | 118 |
endoderm | 3.69e-07 | 118 |
presumptive endoderm | 3.69e-07 | 118 |
subdivision of digestive tract | 6.85e-07 | 114 |