FFCP PHASE1:Mm9::chr19:47929697..47929715,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:47929697..47929715,+
|short_description=p@chr19:47929697..47929715,+
|description=CAGE_peak_at_chr19:47929697..47929715,+
|association_with_transcript=NA
...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=495 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:47929697..47929715,+ | |||
|description=CAGE_peak_at_chr19:47929697..47929715,+ | |||
|id=chr19:47929697..47929715,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,2.56e-25,3;CL:0002202,2.56e-25,3;CL:0000069,2.56e-25,3;CL:0002632,2.56e-25,3;CL:0002368,2.56e-25,3;CL:0000307,2.56e-25,3;CL:0000377,2.56e-25,3;CL:0000349,1.75e-11,3;CL:0000351,1.75e-11,3;CL:0002076,4.69e-09,15;CL:0000223,7.53e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,2.56e-25,3;UBERON:0001005,2.56e-25,3;UBERON:0007196,2.56e-25,3;UBERON:0001558,2.56e-25,3;UBERON:0000358,1.75e-11,3;UBERON:0000307,1.75e-11,3;UBERON:0007010,1.75e-11,3;UBERON:0000996,9.82e-10,1;UBERON:0003975,1.80e-07,5 | |||
|phase1_expression=0,0,0,2.41971369045464,0.500895729946347,0.16787927191189,0,0.258246646883153,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.0850432901510698,0.595745707205312,0,0.159992422793407,0,0,0,0.646413698057667,1.14014051673824,0.504060259519861,0.221730510655305,0,0,0,0.288851619751275,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0.503587271902309,0.405507724878058,0.183546752161682,0,0.218025156380447,0.219686182734472,0.58328969722285,0.139986421625363,0,0.167782606057736,0,0,1.02903774414379,0,0.515672092277442,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0,0.384218305321555,0,0,0,0,0,0,0.0958454710182364,0,0,0.127687338085188,0,0,0,0.52091337055676,0,0,0.30559649555362,0,0.142371680799103,0.186399445825301,0,0.0755715601067855,0.289864488701678,0,0,0,0.649776417447669,0,0,0.170430322578058,0,0,0,0,0,0,5.19578498426914,2.53359865475099,6.57181778519218,0.11418387971906,0,0,0,0,0,0,0.23517741427141,0,0.247194967734374,0,0,0,0,0,0,0,0,0.766371165625774,0.11981512450592,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136072998302656,0.2562274405697,0.0937017245597288,0,0,0.189106080167819,0,0.219195732427575,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0.0810688095458557,0,0,0,0,0,0.660837565967596,0,0,0,0,0,0,0.190225626112559,0.949058123089023,0,0,0.795825888164603,0,0.898819408654221,0.216138049874694,0.597423819763102,0.189667900953082,0,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0.810676133875177,0,0,0.372140947668503,0,0,0,1.4473305640901,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.488660878060728,0.659880491890142,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0.322928853391811,0.0603129249281559,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0.139951452323658,0.138199973804424,0.954670618015114,0,0.203319467126849,0.108005340821801,0.627264888043406,0.436725127492355,0.404593039154462,0.495920734352016,0.523511883968059,0,0.621339313086926,0,0,0.165458490457098,0,0,0,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0.226730383615211,1.10992976687032,2.42227412845584,0.671538465456314,0,0.187682475451182,1.46521299413812,8.57473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0,0.365855945745545,0,0,0,0,0,0,0.154936841185966,0,0,0,0.644613162144895,0.191288332068843,0,0 | |phase1_expression=0,0,0,2.41971369045464,0.500895729946347,0.16787927191189,0,0.258246646883153,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.0850432901510698,0.595745707205312,0,0.159992422793407,0,0,0,0.646413698057667,1.14014051673824,0.504060259519861,0.221730510655305,0,0,0,0.288851619751275,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0.503587271902309,0.405507724878058,0.183546752161682,0,0.218025156380447,0.219686182734472,0.58328969722285,0.139986421625363,0,0.167782606057736,0,0,1.02903774414379,0,0.515672092277442,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0,0.384218305321555,0,0,0,0,0,0,0.0958454710182364,0,0,0.127687338085188,0,0,0,0.52091337055676,0,0,0.30559649555362,0,0.142371680799103,0.186399445825301,0,0.0755715601067855,0.289864488701678,0,0,0,0.649776417447669,0,0,0.170430322578058,0,0,0,0,0,0,5.19578498426914,2.53359865475099,6.57181778519218,0.11418387971906,0,0,0,0,0,0,0.23517741427141,0,0.247194967734374,0,0,0,0,0,0,0,0,0.766371165625774,0.11981512450592,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136072998302656,0.2562274405697,0.0937017245597288,0,0,0.189106080167819,0,0.219195732427575,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0.0810688095458557,0,0,0,0,0,0.660837565967596,0,0,0,0,0,0,0.190225626112559,0.949058123089023,0,0,0.795825888164603,0,0.898819408654221,0.216138049874694,0.597423819763102,0.189667900953082,0,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0.810676133875177,0,0,0.372140947668503,0,0,0,1.4473305640901,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.488660878060728,0.659880491890142,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0.322928853391811,0.0603129249281559,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0.139951452323658,0.138199973804424,0.954670618015114,0,0.203319467126849,0.108005340821801,0.627264888043406,0.436725127492355,0.404593039154462,0.495920734352016,0.523511883968059,0,0.621339313086926,0,0,0.165458490457098,0,0,0,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0.226730383615211,1.10992976687032,2.42227412845584,0.671538465456314,0,0.187682475451182,1.46521299413812,8.57473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0,0.365855945745545,0,0,0,0,0,0,0.154936841185966,0,0,0,0.644613162144895,0.191288332068843,0,0 | ||
|short_description=p@chr19:47929697..47929715,+ | |||
}} | }} |
Latest revision as of 06:52, 4 August 2015
Short description: | p@chr19:47929697..47929715, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:47929697..47929715, + |
Coexpression cluster: | MCL_coexpression_mm9:495 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 2.56e-25 | 3 |
epithelial cell of tracheobronchial tree | 2.56e-25 | 3 |
branched duct epithelial cell | 2.56e-25 | 3 |
epithelial cell of lower respiratory tract | 2.56e-25 | 3 |
respiratory epithelial cell | 2.56e-25 | 3 |
tracheal epithelial cell | 2.56e-25 | 3 |
tracheoblast | 2.56e-25 | 3 |
extraembryonic cell | 1.75e-11 | 3 |
trophoblast cell | 1.75e-11 | 3 |
endo-epithelial cell | 4.69e-09 | 15 |
endodermal cell | 7.53e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
trachea | 2.56e-25 | 3 |
respiratory airway | 2.56e-25 | 3 |
tracheobronchial tree | 2.56e-25 | 3 |
lower respiratory tract | 2.56e-25 | 3 |
blastocyst | 1.75e-11 | 3 |
blastula | 1.75e-11 | 3 |
cleaving embryo | 1.75e-11 | 3 |
vagina | 9.82e-10 | 1 |
internal female genitalia | 1.80e-07 | 5 |