FFCP PHASE1:Mm9::chr19:11679204..11679214,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:11679204..11679214,-
|short_description=p4@Ms4a6d
|description=CAGE_peak_4_at_Ms4a6d_5end
|association_with_transcript=79bp_to_NM_026835,uc008gsm.1_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=68774 | |EntrezGene=68774 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=86 | |||
|TSSclassifier=NA | |||
|UniProt=Q2TVW7,Q99N07 | |UniProt=Q2TVW7,Q99N07 | ||
|association_with_transcript=79bp_to_NM_026835,uc008gsm.1_5end | |||
|cluster_id=chr19:11679204..11679214,- | |||
|description=CAGE_peak_4_at_Ms4a6d_5end | |||
|id=chr19:11679204..11679214,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002476,2.51e-15,2;CL:0002092,4.07e-10,3;CL:0002540,4.07e-10,3;CL:0002194,4.12e-08,4;CL:0000766,4.12e-08,4;CL:0000234,4.12e-08,4;CL:0000576,4.12e-08,4;CL:0000235,4.12e-08,4;CL:0000864,4.12e-08,4;CL:0002009,4.12e-08,4;CL:0000040,4.12e-08,4;CL:0000559,4.12e-08,4;CL:0000355,2.07e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,5.01e-10,3;DOID:4045,5.01e-10,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,3.85e-10,32;UBERON:0000029,2.98e-08,1;UBERON:0001097,2.98e-08,1;UBERON:0003968,2.98e-08,1;UBERON:0001467,2.98e-08,1;UBERON:0006834,5.62e-08,1;UBERON:0001134,2.07e-07,9;UBERON:0002036,2.07e-07,9;UBERON:0002385,2.07e-07,9;UBERON:0000486,2.07e-07,9;UBERON:0007503,2.07e-07,9;UBERON:0001015,2.07e-07,9;UBERON:0002329,2.07e-07,9;UBERON:0003082,2.07e-07,9;UBERON:0003059,2.07e-07,9;UBERON:0007282,2.07e-07,9;UBERON:0004290,2.07e-07,9;UBERON:0009618,2.07e-07,9;UBERON:0002371,2.77e-07,16 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0.666219523631325,0.607425802169478,0,0.315462165358238,0,0,0.340173160604279,0,0,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,6.2506827561904,1.0470474879476,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0.257259436035947,1.71920063963254,0,0,0,0,0,0,3.5995988691256,0.988866362566974,1.4209602298922,0.599200221036809,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.151452386666368,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.79928715803342,3.10725460376606,0.445326417194474,0,0.304465478312141,0.230615497256059,0.60289056221049,0.587943535678524,0.125666591329675,0.494389935468748,0.433798070759735,0,0.323533699894818,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0.248813941220186,0,0.210441855886474,0.130120442962704,0,0,0.452114453507145,0.136072998302656,0,0.187403449119458,0,0,0.189106080167819,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0.284163499395593,0,0,0,0,0,0,0.232533944750408,0.536546802799238,0.116765342367169,0,0.32833492815819,0.162137619091711,0.146199987425332,0,0.134206418760372,0,0.205809224758569,0,0.264450566663544,0,0,0,0,0.22237804384487,0.190225626112559,0,0.329397909448022,0.502670417600539,0.397912944082302,0.38992817423824,0.898819408654221,0,0.199141273254367,0,0,0,0,0,0.420814919341911,0.126473074248515,0,0.156998727841375,0,0.296452627087149,0.166845105716094,0.196558995113203,0,0.405720242777006,0,0,0,0.648540907100142,0.274561413188081,0,0,0.624075346229121,0,0,0,0.554259570499814,0,0,0.169745085775188,0.234690248288502,0.502518772325447,0.476087281772027,0.390267295715598,0.157635144106191,0.664394068946325,0,0.163863314715738,0,0.578596234326046,22.6186925908908,65.8125877420639,0,0.275936746304732,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.325773918707152,0.989820737835213,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0.614870295887855,0.516856586336442,0,0,0.316036757935816,1.05418608574999,1.03135543248187,0,0.18006109403131,0,0,0,0.356737635204141,0.164549020602121,0.304464949114599,0,0,0,0.16488625294148,0.484393280087717,0.0603129249281559,0.238744688006273,0,0,0,1.02522528478712,1.44470807574256,0.740778109478847,0,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0,0,0,0.134864346384821,0.247960367176008,0,0,0,0,0.149516546043979,0.330916980914195,0,0.129159823477731,0.337912250981556,0,0.13020438484395,0,0.483168241652012,0,0,0,0.102710957164827,0.25984164595559,0.179026695667481,0.198681354781265,0.120195449519969,0,0.100966449948148,0.15241361331,0,0.0974578807397524,0,0.701261413089414,0,0,0,0,0,1.12609485270709,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.419226325255965,0.183843508450014,0,0,0,0.505394423527595,0,0.188626341386076,0.0936415074698824,0.256100609619477,0.287177344778066,0,0.347652977834566,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0,0.25384382367503,0.182927972872773,0,0.135804113845862,0.561142271657738,0,0,0,0.464810523557898,0.192906610981141,0.499621155875892,0.233931608445408,0.214871054048298,0.382576664137687,0,0.231867835620421 | |phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0.666219523631325,0.607425802169478,0,0.315462165358238,0,0,0.340173160604279,0,0,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,6.2506827561904,1.0470474879476,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0.257259436035947,1.71920063963254,0,0,0,0,0,0,3.5995988691256,0.988866362566974,1.4209602298922,0.599200221036809,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.151452386666368,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.79928715803342,3.10725460376606,0.445326417194474,0,0.304465478312141,0.230615497256059,0.60289056221049,0.587943535678524,0.125666591329675,0.494389935468748,0.433798070759735,0,0.323533699894818,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0.248813941220186,0,0.210441855886474,0.130120442962704,0,0,0.452114453507145,0.136072998302656,0,0.187403449119458,0,0,0.189106080167819,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0.284163499395593,0,0,0,0,0,0,0.232533944750408,0.536546802799238,0.116765342367169,0,0.32833492815819,0.162137619091711,0.146199987425332,0,0.134206418760372,0,0.205809224758569,0,0.264450566663544,0,0,0,0,0.22237804384487,0.190225626112559,0,0.329397909448022,0.502670417600539,0.397912944082302,0.38992817423824,0.898819408654221,0,0.199141273254367,0,0,0,0,0,0.420814919341911,0.126473074248515,0,0.156998727841375,0,0.296452627087149,0.166845105716094,0.196558995113203,0,0.405720242777006,0,0,0,0.648540907100142,0.274561413188081,0,0,0.624075346229121,0,0,0,0.554259570499814,0,0,0.169745085775188,0.234690248288502,0.502518772325447,0.476087281772027,0.390267295715598,0.157635144106191,0.664394068946325,0,0.163863314715738,0,0.578596234326046,22.6186925908908,65.8125877420639,0,0.275936746304732,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.325773918707152,0.989820737835213,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0.614870295887855,0.516856586336442,0,0,0.316036757935816,1.05418608574999,1.03135543248187,0,0.18006109403131,0,0,0,0.356737635204141,0.164549020602121,0.304464949114599,0,0,0,0.16488625294148,0.484393280087717,0.0603129249281559,0.238744688006273,0,0,0,1.02522528478712,1.44470807574256,0.740778109478847,0,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0,0,0,0.134864346384821,0.247960367176008,0,0,0,0,0.149516546043979,0.330916980914195,0,0.129159823477731,0.337912250981556,0,0.13020438484395,0,0.483168241652012,0,0,0,0.102710957164827,0.25984164595559,0.179026695667481,0.198681354781265,0.120195449519969,0,0.100966449948148,0.15241361331,0,0.0974578807397524,0,0.701261413089414,0,0,0,0,0,1.12609485270709,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.419226325255965,0.183843508450014,0,0,0,0.505394423527595,0,0.188626341386076,0.0936415074698824,0.256100609619477,0.287177344778066,0,0.347652977834566,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0,0.25384382367503,0.182927972872773,0,0.135804113845862,0.561142271657738,0,0,0,0.464810523557898,0.192906610981141,0.499621155875892,0.233931608445408,0.214871054048298,0.382576664137687,0,0.231867835620421 | ||
|short_description=p4@Ms4a6d | |||
}} | }} |
Latest revision as of 22:04, 1 October 2015
Short description: | p4@Ms4a6d |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ms4a6d_5end |
Coexpression cluster: | MCL_coexpression_mm9:86 |
Association with transcript: | 79bp_to_NM_026835, uc008gsm.1_5end |
EntrezGene: | Ms4a6d |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow macrophage | 2.51e-15 | 2 |
bone marrow cell | 4.07e-10 | 3 |
mesenchymal stem cell of the bone marrow | 4.07e-10 | 3 |
monopoietic cell | 4.12e-08 | 4 |
myeloid leukocyte | 4.12e-08 | 4 |
phagocyte | 4.12e-08 | 4 |
monocyte | 4.12e-08 | 4 |
macrophage | 4.12e-08 | 4 |
tissue-resident macrophage | 4.12e-08 | 4 |
macrophage dendritic cell progenitor | 4.12e-08 | 4 |
monoblast | 4.12e-08 | 4 |
promonocyte | 4.12e-08 | 4 |
multi-potent skeletal muscle stem cell | 2.07e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 3.85e-10 | 32 |
lymph node | 2.98e-08 | 1 |
axillary lymph node | 2.98e-08 | 1 |
peripheral lymph node | 2.98e-08 | 1 |
shoulder | 2.98e-08 | 1 |
uterus or analog | 5.62e-08 | 1 |
skeletal muscle tissue | 2.07e-07 | 9 |
striated muscle tissue | 2.07e-07 | 9 |
muscle tissue | 2.07e-07 | 9 |
multilaminar epithelium | 2.07e-07 | 9 |
epithelial vesicle | 2.07e-07 | 9 |
musculature | 2.07e-07 | 9 |
somite | 2.07e-07 | 9 |
myotome | 2.07e-07 | 9 |
presomitic mesoderm | 2.07e-07 | 9 |
presumptive segmental plate | 2.07e-07 | 9 |
dermomyotome | 2.07e-07 | 9 |
trunk paraxial mesoderm | 2.07e-07 | 9 |
bone marrow | 2.77e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 5.01e-10 | 3 |
muscle cancer | 5.01e-10 | 3 |