FFCP PHASE1:Mm9::chr18:69679337..69679354,+: Difference between revisions
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|id=chr18:69679337..69679354,+
|short_description=p@chr18:69679337..69679354,+
|description=CAGE_peak_at_chr18:69679337..69679354,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=437 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:69679337..69679354,+ | |||
|description=CAGE_peak_at_chr18:69679337..69679354,+ | |||
|id=chr18:69679337..69679354,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.22e-16!34;UBERON:0001049!6.35e-14!52;UBERON:0005068!6.35e-14!52;UBERON:0006241!6.35e-14!52;UBERON:0007135!6.35e-14!52;UBERON:0000956!8.40e-14!21;UBERON:0001869!8.40e-14!21;UBERON:0000203!8.40e-14!21;UBERON:0002791!4.83e-13!29;UBERON:0003528!4.83e-13!29;UBERON:0001893!4.83e-13!29;UBERON:0002780!1.83e-10!39;UBERON:0001890!1.83e-10!39;UBERON:0006240!1.83e-10!39;UBERON:0002616!3.64e-10!49;UBERON:0003080!4.02e-10!40;UBERON:0000955!6.90e-10!50;UBERON:0006238!6.90e-10!50;UBERON:0001017!1.02e-09!73;UBERON:0005743!1.02e-09!73;UBERON:0000073!2.46e-09!75;UBERON:0001016!2.46e-09!75;UBERON:0002346!5.29e-09!71;UBERON:0003075!5.29e-09!71;UBERON:0007284!5.29e-09!71;UBERON:0003056!1.11e-07!49;UBERON:0002619!3.23e-07!17;UBERON:0000033!4.22e-07!63;UBERON:0002240!7.98e-07!6;UBERON:0005174!7.98e-07!6;UBERON:0001137!7.98e-07!6;UBERON:0002021!8.26e-07!10;UBERON:0000411!8.26e-07!10;UBERON:0001950!8.26e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,3.00e-25,21;UBERON:0001869,3.00e-25,21;UBERON:0000203,3.00e-25,21;UBERON:0002619,7.65e-22,17;UBERON:0003528,1.94e-18,29;UBERON:0002791,1.94e-18,29;UBERON:0001893,1.94e-18,29;UBERON:0002020,8.43e-16,34;UBERON:0002780,7.80e-14,39;UBERON:0001890,7.80e-14,39;UBERON:0006240,7.80e-14,39;UBERON:0002021,8.21e-14,10;UBERON:0000411,8.21e-14,10;UBERON:0001950,8.21e-14,10;UBERON:0003080,1.69e-13,40;UBERON:0002616,8.56e-12,46;UBERON:0000955,1.50e-11,47;UBERON:0006238,1.50e-11,47;UBERON:0003056,4.27e-11,49;UBERON:0001049,1.77e-10,52;UBERON:0005068,1.77e-10,52;UBERON:0006241,1.77e-10,52;UBERON:0007135,1.77e-10,52;UBERON:0000073,4.19e-10,54;UBERON:0001954,2.15e-09,7;UBERON:0003022,2.15e-09,7;UBERON:0002421,2.15e-09,7;UBERON:0000349,2.15e-09,7;UBERON:0002600,2.15e-09,7;UBERON:0002346,1.41e-08,64;UBERON:0003075,1.41e-08,64;UBERON:0007284,1.41e-08,64;UBERON:0010371,1.48e-07,73;UBERON:0001017,1.48e-07,73;UBERON:0001016,2.31e-07,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622137673850866,0.675029691658453,0.210324961351382,0.571301968807607,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0,0.284743361598206,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376963056338593,1.04294592115366,0.511430914660661,0,0.324482526135515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,1.05144974282064,4.52780294468852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,1.71868654031819,0.68741272937475,0,0,0,0.900642406448441,1.81256963593682,1.03552062350364,0,0.399024873401031,0,0,0,0,0,0,0.320919209591815,0.252697211763798,0,0,0,0.0640251524048693,0.0574354689556133,0.476293691283074,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0.409231043169689,0,0,0.249810577937946,0.467863216890817,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622137673850866,0.675029691658453,0.210324961351382,0.571301968807607,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0,0.284743361598206,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376963056338593,1.04294592115366,0.511430914660661,0,0.324482526135515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,1.05144974282064,4.52780294468852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,1.71868654031819,0.68741272937475,0,0,0,0.900642406448441,1.81256963593682,1.03552062350364,0,0.399024873401031,0,0,0,0,0,0,0.320919209591815,0.252697211763798,0,0,0,0.0640251524048693,0.0574354689556133,0.476293691283074,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0.409231043169689,0,0,0.249810577937946,0.467863216890817,0,0,0,0 | ||
|short_description=p@chr18:69679337..69679354,+ | |||
}} | }} |
Latest revision as of 02:15, 6 August 2015
Short description: | p@chr18:69679337..69679354, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:69679337..69679354, + |
Coexpression cluster: | MCL_coexpression_mm9:437 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 3.00e-25 | 21 |
cerebral hemisphere | 3.00e-25 | 21 |
pallium | 3.00e-25 | 21 |
regional part of cerebral cortex | 7.65e-22 | 17 |
brain grey matter | 1.94e-18 | 29 |
regional part of telencephalon | 1.94e-18 | 29 |
telencephalon | 1.94e-18 | 29 |
gray matter | 8.43e-16 | 34 |
regional part of forebrain | 7.80e-14 | 39 |
forebrain | 7.80e-14 | 39 |
future forebrain | 7.80e-14 | 39 |
occipital lobe | 8.21e-14 | 10 |
visual cortex | 8.21e-14 | 10 |
neocortex | 8.21e-14 | 10 |
anterior neural tube | 1.69e-13 | 40 |
regional part of brain | 8.56e-12 | 46 |
brain | 1.50e-11 | 47 |
future brain | 1.50e-11 | 47 |
pre-chordal neural plate | 4.27e-11 | 49 |
neural tube | 1.77e-10 | 52 |
neural rod | 1.77e-10 | 52 |
future spinal cord | 1.77e-10 | 52 |
neural keel | 1.77e-10 | 52 |
regional part of nervous system | 4.19e-10 | 54 |
Ammon's horn | 2.15e-09 | 7 |
lobe parts of cerebral cortex | 2.15e-09 | 7 |
hippocampal formation | 2.15e-09 | 7 |
limbic system | 2.15e-09 | 7 |
limbic lobe | 2.15e-09 | 7 |
neurectoderm | 1.41e-08 | 64 |
neural plate | 1.41e-08 | 64 |
presumptive neural plate | 1.41e-08 | 64 |
ecto-epithelium | 1.48e-07 | 73 |
central nervous system | 1.48e-07 | 73 |
nervous system | 2.31e-07 | 75 |