FFCP PHASE1:Mm9::chr18:61173854..61173915,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:61173854..61173915,-
|short_description=p1@Slc6a7
|description=CAGE_peak_1_at_Slc6a7_5end
|association_with_transcript=-1bp_to_ENSMUST00000025520,NM_20135...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=240332 | |EntrezGene=240332 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q6PGE7 | |UniProt=Q6PGE7 | ||
|association_with_transcript=-1bp_to_ENSMUST00000025520,NM_201353,uc008fbi.1_5end | |||
|cluster_id=chr18:61173854..61173915,- | |||
|description=CAGE_peak_1_at_Slc6a7_5end | |||
|id=chr18:61173854..61173915,- | |||
|ontology_enrichment_celltype=CL:0000117!2.42e-11!23;CL:0000337!2.42e-11!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.85e-15,23;CL:0000337,2.85e-15,23;CL:0000540,6.62e-10,33;CL:0000047,6.62e-10,33;CL:0000031,6.62e-10,33;CL:0000404,6.62e-10,33;CL:0000393,1.53e-07,39;CL:0000211,1.53e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!7.85e-17!34;UBERON:0001049!1.32e-14!52;UBERON:0005068!1.32e-14!52;UBERON:0006241!1.32e-14!52;UBERON:0007135!1.32e-14!52;UBERON:0000955!2.61e-13!50;UBERON:0006238!2.61e-13!50;UBERON:0001017!2.75e-13!73;UBERON:0005743!2.75e-13!73;UBERON:0002791!4.21e-13!29;UBERON:0003528!4.21e-13!29;UBERON:0001893!4.21e-13!29;UBERON:0000073!6.91e-13!75;UBERON:0001016!6.91e-13!75;UBERON:0002616!1.15e-12!49;UBERON:0000033!1.46e-10!63;UBERON:0003080!9.20e-10!40;UBERON:0002619!9.41e-10!17;UBERON:0002021!9.99e-10!10;UBERON:0000411!9.99e-10!10;UBERON:0001950!9.99e-10!10;UBERON:0002346!1.21e-09!71;UBERON:0003075!1.21e-09!71;UBERON:0007284!1.21e-09!71;UBERON:0002780!3.38e-09!39;UBERON:0001890!3.38e-09!39;UBERON:0006240!3.38e-09!39;UBERON:0004121!4.03e-09!102;UBERON:0000924!4.03e-09!102;UBERON:0006601!4.03e-09!102;UBERON:0003056!3.18e-08!49;UBERON:0000956!5.35e-08!21;UBERON:0001869!5.35e-08!21;UBERON:0000203!5.35e-08!21;UBERON:0007811!2.58e-07!86;UBERON:0002420!8.90e-07!8;UBERON:0007245!8.90e-07!8;UBERON:0010009!8.90e-07!8;UBERON:0010011!8.90e-07!8;UBERON:0000454!8.90e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.20e-27,54;UBERON:0002020,1.16e-24,34;UBERON:0001049,1.54e-24,52;UBERON:0005068,1.54e-24,52;UBERON:0006241,1.54e-24,52;UBERON:0007135,1.54e-24,52;UBERON:0001017,1.74e-24,73;UBERON:0001016,1.84e-23,75;UBERON:0000955,2.99e-19,47;UBERON:0006238,2.99e-19,47;UBERON:0003528,8.04e-19,29;UBERON:0002791,8.04e-19,29;UBERON:0001893,8.04e-19,29;UBERON:0002346,8.66e-19,64;UBERON:0003075,8.66e-19,64;UBERON:0007284,8.66e-19,64;UBERON:0002616,3.07e-18,46;UBERON:0004121,2.29e-17,95;UBERON:0000924,2.29e-17,95;UBERON:0006601,2.29e-17,95;UBERON:0003080,4.81e-16,40;UBERON:0010371,5.63e-16,73;UBERON:0002780,4.06e-15,39;UBERON:0001890,4.06e-15,39;UBERON:0006240,4.06e-15,39;UBERON:0002021,1.79e-14,10;UBERON:0000411,1.79e-14,10;UBERON:0001950,1.79e-14,10;UBERON:0003056,1.62e-12,49;UBERON:0002619,2.71e-12,17;UBERON:0000956,6.96e-11,21;UBERON:0001869,6.96e-11,21;UBERON:0000203,6.96e-11,21;UBERON:0002420,8.04e-10,8;UBERON:0007245,8.04e-10,8;UBERON:0010009,8.04e-10,8;UBERON:0010011,8.04e-10,8;UBERON:0000454,8.04e-10,8;UBERON:0010314,1.08e-09,92;UBERON:0003076,2.05e-09,12;UBERON:0003057,2.05e-09,12;UBERON:0002240,2.77e-08,6;UBERON:0005174,2.77e-08,6;UBERON:0001137,2.77e-08,6;UBERON:0001948,2.15e-07,5;UBERON:0002315,2.15e-07,5 | |||
|phase1_expression=0,0,0,0,0,1.34303417529512,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,2.04103896362567,0,0,0.47997726838022,0,0.57423196411502,0,0.646413698057667,0.570070258369122,0.252030129759931,0.665191531965914,0,0,0,0.577703239502549,0.166234645358492,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,6.27181028664753,10.5798195854407,3.80298842103708,0,0,0,0,0,0,0.384218305321555,0,0,0,22.2807767834967,25.3998822094356,0.979926393719632,0.670918297127655,4.5960939330501,13.2139057199266,20.0469120793745,16.1286859919056,10.5509030184155,13.631658896759,8.33461392890816,12.0048689570594,19.1339287410771,13.7518422999129,20.0347438122094,19.9320353118744,4.84638559145781,0.075726193333184,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0,0,0,0.150722640552623,0,0,0,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,2.34224637609238,2.72280718857492,0.255457055208591,0,0,0,11.833460512981,5.94750783664214,5.27748278874031,21.9018643442268,24.8043993610421,13.9217989854905,21.9025705141473,0.101839363850316,0,0,0,0,0,0,0,0.408218994907967,0.12811372028485,0.374806898238915,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0.146199987425332,0.219550115291051,0,19.767255165028,2.88132914661996,0,0,0,0,0.257734922644187,0.80673409849337,0.889512175379481,0.380451252225118,0,0,0.251335208800269,0.198956472041151,0.38992817423824,0,0,0.398282546508734,0,0,0,0.203651327845314,0,0.350679099451593,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,6.26147300952389,8.08760637486202,0,0,0,0,0,0,0,1.13230612315533,0,0,0,16.0660658210904,0,0,0.162886959353576,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31909002353184,0,0,0.119372344003136,0,0.582961673259701,4.26478194624172,0,0,0,0,0,0,0,0.139951452323658,0,0,0.158167996790568,0,0,0,0,0,0,0,0.129614973291793,0,0,0.299033092087958,0.496375471371293,0.194451188344048,0,0.337912250981556,0.469428954583016,0,0,0,0.288030006257865,0,0,0.102710957164827,0,0.716106782669926,0.596044064343795,0.240390899039938,0,0,0.0762068066549998,0.302478555410522,0.194915761479505,0.288635524920988,0.233753804363138,0.906921534460845,0,0,0,0,0.750729901804728,0.183151624267265,0,0,36.7088697701093,43.2705722316746,35.5195218332426,41.0729105801413,13.0165678756422,21.1510291269116,26.3258775090404,22.9663813644352,23.1102628581944,24.8524949640874,0,0,0.341467211508268,0.972426868273176,0.419226325255965,1.47074806760011,2.44471400581777,1.64828045791115,1.92551525755089,2.02157769411038,1.01391719956096,1.50901073108861,1.77918864192777,2.30490548657529,1.95280594449085,1.42888107384922,2.0859178670074,1.35036454324594,1.64834360321323,2.35518272215036,0.342869252385415,1.59728225543404,0.238436189947321,1.59881058295561,1.69396884747595,2.11536519729191,1.46342378298218,0.789209134313529,0.814824683075171,1.68342681497322,2.01679530811096,2.36410757701352,3.27384834535751,3.25367366490529,1.35034627686799,2.74791635731741,1.16965804222704,1.28922632428979,1.14772999241306,0.661774257358546,0.927471342481686 | |phase1_expression=0,0,0,0,0,1.34303417529512,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,2.04103896362567,0,0,0.47997726838022,0,0.57423196411502,0,0.646413698057667,0.570070258369122,0.252030129759931,0.665191531965914,0,0,0,0.577703239502549,0.166234645358492,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,6.27181028664753,10.5798195854407,3.80298842103708,0,0,0,0,0,0,0.384218305321555,0,0,0,22.2807767834967,25.3998822094356,0.979926393719632,0.670918297127655,4.5960939330501,13.2139057199266,20.0469120793745,16.1286859919056,10.5509030184155,13.631658896759,8.33461392890816,12.0048689570594,19.1339287410771,13.7518422999129,20.0347438122094,19.9320353118744,4.84638559145781,0.075726193333184,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0,0,0,0.150722640552623,0,0,0,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,2.34224637609238,2.72280718857492,0.255457055208591,0,0,0,11.833460512981,5.94750783664214,5.27748278874031,21.9018643442268,24.8043993610421,13.9217989854905,21.9025705141473,0.101839363850316,0,0,0,0,0,0,0,0.408218994907967,0.12811372028485,0.374806898238915,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0.146199987425332,0.219550115291051,0,19.767255165028,2.88132914661996,0,0,0,0,0.257734922644187,0.80673409849337,0.889512175379481,0.380451252225118,0,0,0.251335208800269,0.198956472041151,0.38992817423824,0,0,0.398282546508734,0,0,0,0.203651327845314,0,0.350679099451593,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,6.26147300952389,8.08760637486202,0,0,0,0,0,0,0,1.13230612315533,0,0,0,16.0660658210904,0,0,0.162886959353576,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31909002353184,0,0,0.119372344003136,0,0.582961673259701,4.26478194624172,0,0,0,0,0,0,0,0.139951452323658,0,0,0.158167996790568,0,0,0,0,0,0,0,0.129614973291793,0,0,0.299033092087958,0.496375471371293,0.194451188344048,0,0.337912250981556,0.469428954583016,0,0,0,0.288030006257865,0,0,0.102710957164827,0,0.716106782669926,0.596044064343795,0.240390899039938,0,0,0.0762068066549998,0.302478555410522,0.194915761479505,0.288635524920988,0.233753804363138,0.906921534460845,0,0,0,0,0.750729901804728,0.183151624267265,0,0,36.7088697701093,43.2705722316746,35.5195218332426,41.0729105801413,13.0165678756422,21.1510291269116,26.3258775090404,22.9663813644352,23.1102628581944,24.8524949640874,0,0,0.341467211508268,0.972426868273176,0.419226325255965,1.47074806760011,2.44471400581777,1.64828045791115,1.92551525755089,2.02157769411038,1.01391719956096,1.50901073108861,1.77918864192777,2.30490548657529,1.95280594449085,1.42888107384922,2.0859178670074,1.35036454324594,1.64834360321323,2.35518272215036,0.342869252385415,1.59728225543404,0.238436189947321,1.59881058295561,1.69396884747595,2.11536519729191,1.46342378298218,0.789209134313529,0.814824683075171,1.68342681497322,2.01679530811096,2.36410757701352,3.27384834535751,3.25367366490529,1.35034627686799,2.74791635731741,1.16965804222704,1.28922632428979,1.14772999241306,0.661774257358546,0.927471342481686 | ||
|short_description=p1@Slc6a7 | |||
}} | }} |
Latest revision as of 13:47, 1 October 2015
Short description: | p1@Slc6a7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Slc6a7_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -1bp_to_ENSMUST00000025520, NM_201353, uc008fbi.1_5end |
EntrezGene: | Slc6a7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.85e-15 | 23 |
neuroblast (sensu Vertebrata) | 2.85e-15 | 23 |
neuron | 6.62e-10 | 33 |
neuronal stem cell | 6.62e-10 | 33 |
neuroblast | 6.62e-10 | 33 |
electrically signaling cell | 6.62e-10 | 33 |
electrically responsive cell | 1.53e-07 | 39 |
electrically active cell | 1.53e-07 | 39 |