FFCP PHASE2:Hg19::chr17:46675619..46675642,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:3216 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript |HGNC=HGNC:5117 ...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=3216 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC= | |HGNC=5117 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P17509 | ||
|association_with_transcript=438bp_to_uc002int.1_5end | |association_with_transcript=438bp_to_uc002int.1_5end | ||
|cluster_id=chr17:46675619..46675642,- | |cluster_id=chr17:46675619..46675642,- |
Latest revision as of 07:25, 25 September 2015
Short description: | p5@HOXB6 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HOXB6_5end |
Coexpression cluster: | NA |
Association with transcript: | 438bp_to_uc002int.1_5end |
EntrezGene: | HOXB6 |
HGNC: | 5117 |
UniProt: | P17509 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p5@HOXB6 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 5.95e-19 | 15 |
kidney cortical cell | 4.29e-17 | 12 |
renal cortical epithelial cell | 4.29e-17 | 12 |
kidney cell | 2.29e-16 | 17 |
kidney epithelial cell | 2.29e-16 | 17 |
kidney tubule cell | 1.94e-13 | 10 |
nephron tubule epithelial cell | 1.94e-13 | 10 |
brush border epithelial cell | 8.64e-08 | 3 |
kidney cortex tubule cell | 8.64e-08 | 3 |
epithelial cell of proximal tubule | 8.64e-08 | 3 |
Showing 1 to 10 of 16 entries
Ontology term | p-value | n |
---|---|---|
cavitated compound organ | 6.43e-25 | 31 |
kidney | 3.72e-21 | 26 |
kidney mesenchyme | 3.72e-21 | 26 |
upper urinary tract | 3.72e-21 | 26 |
kidney rudiment | 3.72e-21 | 26 |
kidney field | 3.72e-21 | 26 |
excretory tube | 5.75e-21 | 16 |
kidney epithelium | 5.75e-21 | 16 |
nephron epithelium | 5.95e-19 | 15 |
renal tubule | 5.95e-19 | 15 |
Showing 1 to 10 of 80 entries
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 9.82e-07 | 6 |
Showing 1 to 1 of 1 entries