FFCP PHASE1:Mm9::chr18:11815861..11815995,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:11815861..11815995,+
|short_description=p1@Rbbp8
|description=CAGE_peak_1_at_Rbbp8_5end
|association_with_transcript=0bp_to_ENSMUST00000047322,uc008ebn.1,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=225182 | |EntrezGene=225182 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=E9Q888 | |UniProt=E9Q888 | ||
|association_with_transcript=0bp_to_ENSMUST00000047322,uc008ebn.1,uc008ebo.1,uc012azh.1_5end | |||
|cluster_id=chr18:11815861..11815995,+ | |||
|description=CAGE_peak_1_at_Rbbp8_5end | |||
|id=chr18:11815861..11815995,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!5.65e-16!193;UBERON:0004120!5.65e-16!193;UBERON:0006603!5.65e-16!193;UBERON:0004119!6.25e-11!130;UBERON:0000925!6.25e-11!130;UBERON:0006595!6.25e-11!130;UBERON:0004921!7.69e-11!126;UBERON:0004185!7.69e-11!126;UBERON:0000464!1.18e-10!57;UBERON:0001007!2.28e-10!128;UBERON:0001555!2.28e-10!128;UBERON:0007026!2.28e-10!128;UBERON:0001041!3.48e-10!92;UBERON:0000077!3.78e-10!97;UBERON:0000466!8.67e-10!79;UBERON:0003104!2.45e-09!131;UBERON:0009142!2.45e-09!131;UBERON:0001048!5.35e-09!147;UBERON:0002323!1.90e-08!37;UBERON:0004458!1.90e-08!37;UBERON:0002553!4.15e-08!39;UBERON:0003886!5.74e-08!38 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.19e-08,118;UBERON:0000925,1.19e-08,118;UBERON:0006595,1.19e-08,118;UBERON:0004921,1.41e-08,114;UBERON:0002323,1.90e-08,37;UBERON:0004458,1.90e-08,37;UBERON:0001007,3.76e-08,116;UBERON:0001555,3.76e-08,116;UBERON:0007026,3.76e-08,116;UBERON:0002553,4.15e-08,39;UBERON:0001041,5.06e-08,80;UBERON:0003886,5.74e-08,38;UBERON:0005177,1.83e-07,79;UBERON:0000926,4.36e-07,120;UBERON:0004120,4.36e-07,120;UBERON:0006603,4.36e-07,120 | |||
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| |phase1_expression=8.80818659076367,13.9590163055744,15.9249733786338,10.2837831844322,13.023288978605,9.40123922706583,6.30754129607919,2.58246646883153,36.6050677594334,35.577808000943,8.38968044304974,9.57265907944037,4.28001824828014,3.4093956943409,12.3250611871795,20.6524772737622,20.9868563438444,11.5143690355757,11.1062691220648,11.8829102503448,9.18467533631554,9.63122226648587,7.57479388502913,7.1996590257033,5.50582274561208,14.3557991028755,7.75371593086335,6.46413698057667,3.04037471130198,4.78857246543868,6.43018480900384,10.1604907753541,4.92051830067656,0,10.3986583110459,9.97407872150954,10.4126371693808,9.62622750694888,10.1573594788094,15.7057123192139,9.99993529652724,7.5135003345429,13.5942898848723,2.01434908760924,2.93993100536592,2.38610777810186,0,0.872100625521786,1.09843091367236,1.94429899074283,1.39986421625363,1.43752564364972,16.9460432118314,13.0565185562042,14.7881271622684,4.3734104126111,4.01146815914259,6.70373719960675,1.82084814773638,2.11596391708813,2.53532561402472,1.69422266034566,1.77858959222228,4.04954872776629,2.96659908770092,3.5524005747305,0,1.53687322128622,3.31806759387129,2.8351247049655,2.3135745748652,1.71390590642282,1.10434270475807,4.89963196859816,2.97120960156533,2.75765635983006,1.10115880999389,2.29837208553338,2.30409799884365,1.58263545276233,1.37231465403614,3.64639359389732,1.11673199600552,1.68828783009504,2.13917546887534,3.24091444021034,4.12877874317399,3.91438836233131,6.89108359331975,6.72586884950391,21.4499721639242,4.30211938490693,9.51959867190851,4.31762553310254,9.09686984426737,7.6164570806547,3.65155492342555,5.62420064507591,8.3131521472918,6.00677276667578,8.45060518660083,3.84979432242953,10.1922095882658,7.11066703153331,10.1750789275271,15.2015919285059,10.1104889002957,10.9616524530298,19.4203412735379,8.01587550950054,10.5826049327343,10.0473607843007,11.0695438682908,11.3041980414467,13.9930561491489,14.8286577769017,12.3597483867187,6.2177723475562,7.07688441559899,7.92657564742305,8.17113618303456,12.6067565815158,3.72783522436244,1.75668478206928,5.44561437714983,8.68553987709211,26.3593273913025,16.197373736822,20.0770958775442,2.24685959107234,1.37250180845588,5.27748278874031,2.9550134432687,1.79000820131231,2.28566849015516,2.92034273521964,12.220723662038,9.20611582514688,6.06534620240819,2.31486041475121,11.9710807525687,10.3455946995063,9.36323074987816,10.2479276128286,11.6342413548771,9.22418786050918,8.62055865949505,2.06962696591213,7.11374376678379,10.0226222488944,9.14945845652534,6.79506770525482,7.22922847986555,7.3132954969655,6.1734640922383,9.75267907410617,18.9597560574573,13.8967869841946,15.9131559661532,13.4631752148076,7.97388603935727,8.28285482720668,9.46978942340841,11.0187969778546,10.4901636763417,9.06882384526591,10.7309360559848,8.64063533517054,9.70903114489535,7.05920095540109,5.43161023957233,6.72519942156529,6.14740322814942,7.24714661306008,1.05144974282064,5.24813523134351,12.2254949704005,8.72686869989696,10.2378360256912,13.9342003116263,10.1805294444454,10.4875432804138,9.11749979763968,8.56015317506516,5.21981967698963,9.22314146454461,9.29940272560997,11.5394753783867,10.1381325301942,10.7858329038507,11.8875927431082,8.56307474993779,3.22435431620239,10.6251116727048,12.3978509240388,9.16430975303914,8.92181440971078,11.7828177415735,10.813447848248,10.0374900626129,8.79192875911699,9.87177311374404,6.81841042300442,9.84386123724955,10.8107447312262,8.99448449539415,12.5773275260872,8.92355491083942,11.4581633301639,8.34318798607351,11.0251954207024,11.8061407670875,12.9391385874619,6.32639611036456,8.42501717409313,5.55673531483646,7.17589654087649,9.64887042726734,8.31389355749721,10.9905018826881,11.2445833744998,10.3544502322865,11.0304416695596,10.5528942188344,6.18913466303636,16.1960927721973,11.5073655197519,13.9522754478728,14.1914744105164,11.1427054006702,12.0879487306127,10.2700831592873,7.53956419696361,5.98296252200581,4.42587845717133,7.72622889653251,1.60550589987792,3.04750385139728,3.93443868904021,4.54447668967871,6.31016438832513,7.02789739733949,6.03185513651837,9.08081432219698,4.67877215573028,7.35998980050964,6.07216052512342,6.13737301613755,5.13874111330481,3.21321316421807,10.2196861349953,7.30068975035746,14.3340524231147,9.73323725537959,11.9470624505967,7.28341908464944,9.37203026590728,12.6365403436452,6.20133975049623,11.6825356218692,15.247269296925,12.3601468022352,9.26893183800275,12.6414703174326,13.7044191147498,15.470331487228,4.76615448055303,10.0834212657534,2.45781499187234,7.28745919107414,6.56158864476412,8.20496560969525,6.58196082408484,5.78483403317739,12.4376005273766,11.2270997557825,6.61585194164886,8.57408515295696,6.13564821444441,7.41848976616317,8.35606408021955,6.72977688954751,9.03590593552537,2.22510362412612,10.423123728669,10.5257302661243,10.7412825874433,16.0113188453987,16.9500842374071,14.6418030852174,20.9073468892442,23.7917468950219,23.3557955729476,8.59203556213602,11.8625997592926,10.5726122905961,11.98859283121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| ||
|short_description=p1@Rbbp8 | |||
}} | }} |
Latest revision as of 01:27, 27 September 2015
Short description: | p1@Rbbp8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rbbp8_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000047322, uc008ebn.1, uc008ebo.1, uc012azh.1_5end |
EntrezGene: | Rbbp8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.19e-08 | 118 |
endoderm | 1.19e-08 | 118 |
presumptive endoderm | 1.19e-08 | 118 |
subdivision of digestive tract | 1.41e-08 | 114 |
body cavity | 1.90e-08 | 37 |
body cavity or lining | 1.90e-08 | 37 |
digestive system | 3.76e-08 | 116 |
digestive tract | 3.76e-08 | 116 |
primitive gut | 3.76e-08 | 116 |
anatomical cavity | 4.15e-08 | 39 |
foregut | 5.06e-08 | 80 |
body cavity precursor | 5.74e-08 | 38 |
trunk region element | 1.83e-07 | 79 |
mesoderm | 4.36e-07 | 120 |
mesoderm-derived structure | 4.36e-07 | 120 |
presumptive mesoderm | 4.36e-07 | 120 |