FFCP PHASE1:Mm9::chr17:73681574..73681576,+: Difference between revisions
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|id=chr17:73681574..73681576,+
|short_description=p@chr17:73681574..73681576,+
|description=CAGE_peak_at_chr17:73681574..73681576,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:73681574..73681576,+ | |||
|description=CAGE_peak_at_chr17:73681574..73681576,+ | |||
|id=chr17:73681574..73681576,+ | |||
|ontology_enrichment_celltype=CL:0000473!2.06e-27!3;CL:0000627!2.06e-27!3;CL:0000682!2.06e-27!3;CL:0000239!7.32e-24!6;CL:0000677!7.32e-24!6;CL:0000212!7.32e-24!6;CL:0000584!7.32e-24!6;CL:0000075!1.60e-20!7;CL:0000066!3.69e-17!25;CL:0002563!4.63e-16!9;CL:0002251!4.63e-16!9;CL:0002076!8.81e-10!15;CL:0000223!2.08e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,4.98e-38,3;CL:0000239,1.83e-19,6;CL:0000677,1.83e-19,6;CL:0000584,1.83e-19,6;CL:0000066,3.00e-18,25;CL:0000075,8.43e-17,7;CL:0000473,8.43e-17,7;CL:0002563,3.07e-13,9;CL:0002251,3.07e-13,9;CL:0002076,3.23e-08,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.75e-28!15;UBERON:0001962!2.91e-18!2;UBERON:0001961!2.91e-18!2;UBERON:0001744!2.91e-18!2;UBERON:0004923!1.50e-17!24;UBERON:0001242!6.27e-17!13;UBERON:0000060!6.27e-17!13;UBERON:0001262!6.27e-17!13;UBERON:0004786!6.27e-17!13;UBERON:0003350!4.63e-16!9;UBERON:0004808!4.63e-16!9;UBERON:0001277!4.63e-16!9;UBERON:0000485!3.26e-13!11;UBERON:0002465!1.63e-12!3;UBERON:0003199!4.59e-10!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,8.94e-14,15;UBERON:0003199,1.55e-13,1;UBERON:0003350,3.07e-13,9;UBERON:0004808,3.07e-13,9;UBERON:0001277,3.07e-13,9;UBERON:0000485,5.80e-11,11;UBERON:0001242,2.21e-09,13;UBERON:0001262,2.21e-09,13;UBERON:0004786,2.21e-09,13;UBERON:0004923,8.68e-09,24;UBERON:0001962,2.03e-07,2;UBERON:0001961,2.03e-07,2;UBERON:0001744,2.03e-07,2 | |||
|phase1_expression=0,4.53668029931169,0.909998478779072,0,0,2.18243053485457,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95995453676044,1.37645568640302,1.14846392823004,2.58457197695445,4.95583835177545,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,4.53668029931169,0.909998478779072,0,0,2.18243053485457,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95995453676044,1.37645568640302,1.14846392823004,2.58457197695445,4.95583835177545,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:73681574..73681576,+ | |||
}} | }} |
Latest revision as of 07:51, 5 August 2015
Short description: | p@chr17:73681574..73681576, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:73681574..73681576, + |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 4.98e-38 | 3 |
brush border epithelial cell | 1.83e-19 | 6 |
gut absorptive cell | 1.83e-19 | 6 |
enterocyte | 1.83e-19 | 6 |
epithelial cell | 3.00e-18 | 25 |
columnar/cuboidal epithelial cell | 8.43e-17 | 7 |
defensive cell | 8.43e-17 | 7 |
intestinal epithelial cell | 3.07e-13 | 9 |
epithelial cell of alimentary canal | 3.07e-13 | 9 |
endo-epithelial cell | 3.23e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 8.94e-14 | 15 |
egg chamber | 1.55e-13 | 1 |
epithelium of mucosa | 3.07e-13 | 9 |
gastrointestinal system epithelium | 3.07e-13 | 9 |
intestinal epithelium | 3.07e-13 | 9 |
simple columnar epithelium | 5.80e-11 | 11 |
intestinal mucosa | 2.21e-09 | 13 |
wall of intestine | 2.21e-09 | 13 |
gastrointestinal system mucosa | 2.21e-09 | 13 |
organ component layer | 8.68e-09 | 24 |
gut-associated lymphoid tissue | 2.03e-07 | 2 |
mucosa-associated lymphoid tissue | 2.03e-07 | 2 |
lymphoid tissue | 2.03e-07 | 2 |