FFCP PHASE1:Hg19::chr11:560958..561046,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=8045 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=1166 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q02833,F8W7Q0 | ||
|association_with_transcript=0bp_to_ENST00000344375,ENST00000414138,ENST00000524468,NM_001143993,uc001lqb.2_5end | |association_with_transcript=0bp_to_ENST00000344375,ENST00000414138,ENST00000524468,NM_001143993,uc001lqb.2_5end | ||
|cluster_id=chr11:560958..561046,+ | |cluster_id=chr11:560958..561046,+ | ||
Latest revision as of 08:11, 18 September 2015
| Short description: | p1@RASSF7 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_RASSF7_5end |
| Coexpression cluster: | C2136_Alveolar_serous_Placental_Renal_amniotic_Small_Mammary |
| Association with transcript: | 0bp_to_ENST00000344375, ENST00000414138, ENST00000524468, NM_001143993, uc001lqb.2_5end |
| EntrezGene: | RASSF7 |
| HGNC: | 1166 |
| UniProt: | Q02833F8W7Q0 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@RASSF7 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 1.07e-33 | 253 |
| endodermal cell | 4.97e-13 | 58 |
| endo-epithelial cell | 6.12e-12 | 42 |
| kidney cell | 9.04e-08 | 17 |
| kidney epithelial cell | 9.04e-08 | 17 |
| kidney tubule cell | 2.09e-07 | 10 |
| nephron tubule epithelial cell | 2.09e-07 | 10 |
| mature alpha-beta T cell | 2.37e-07 | 18 |
| alpha-beta T cell | 2.37e-07 | 18 |
| immature T cell | 2.37e-07 | 18 |
Showing 1 to 10 of 16 entries
| Ontology term | p-value | n |
|---|---|---|
| endoderm-derived structure | 9.75e-12 | 160 |
| endoderm | 9.75e-12 | 160 |
| presumptive endoderm | 9.75e-12 | 160 |
| renal system | 3.67e-11 | 48 |
| subdivision of digestive tract | 5.62e-11 | 118 |
| urinary system structure | 6.49e-11 | 47 |
| abdomen element | 3.06e-10 | 54 |
| abdominal segment element | 3.06e-10 | 54 |
| trunk region element | 5.63e-09 | 101 |
| endo-epithelium | 6.75e-09 | 82 |
Showing 1 to 10 of 34 entries
| Ontology term | p-value | n |
|---|---|---|
| carcinoma | 5.96e-12 | 106 |
| cell type cancer | 1.93e-08 | 143 |
| cancer | 2.00e-08 | 235 |
| adenocarcinoma | 7.04e-08 | 25 |
| disease of cellular proliferation | 1.63e-07 | 239 |
Showing 1 to 5 of 5 entries
