FFCP PHASE1:Mm9::chr16:19063387..19063424,+: Difference between revisions
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|id=chr16:19063387..19063424,+
|short_description=p@chr16:19063387..19063424,+
|description=CAGE_peak_at_chr16:19063387..19063424,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:19063387..19063424,+ | |||
|description=CAGE_peak_at_chr16:19063387..19063424,+ | |||
|id=chr16:19063387..19063424,+ | |||
|ontology_enrichment_celltype=CL:0000553!1.39e-16!6;CL:0000556!1.39e-16!6;CL:0000050!5.66e-11!9;CL:0000414!6.30e-09!11;CL:0000839!1.65e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,8.87e-20,6;CL:0000556,8.87e-20,6;CL:0000945,1.16e-13,1;CL:0000236,1.16e-13,1;CL:0000826,1.16e-13,1;CL:0000050,1.90e-13,9;CL:0000839,1.59e-09,13;CL:0002031,1.43e-08,25;CL:0000763,7.36e-08,16;CL:0000988,8.81e-07,32;CL:0002032,8.81e-07,32;CL:0000037,8.81e-07,32;CL:0000837,8.81e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!7.29e-16!6;UBERON:0004457!7.29e-16!6;UBERON:0000042!7.29e-16!6;UBERON:0004854!7.29e-16!6;UBERON:0009034!7.29e-16!6;UBERON:0002095!7.29e-16!6;UBERON:0004782!7.29e-16!6;UBERON:0003281!7.29e-16!6;UBERON:0009664!7.29e-16!6;UBERON:0002296!7.29e-16!6;UBERON:0005602!7.29e-16!6;UBERON:0001179!7.29e-16!6;UBERON:0006293!7.29e-16!6;UBERON:0003887!3.55e-13!10;UBERON:0002465!2.77e-12!3;UBERON:0002193!2.19e-11!48;UBERON:0001962!1.50e-08!2;UBERON:0001961!1.50e-08!2;UBERON:0001744!1.50e-08!2;UBERON:0000945!5.77e-08!16;UBERON:0010039!5.77e-08!16;UBERON:0000464!3.09e-07!57;UBERON:0002405!4.81e-07!70;UBERON:0002390!5.03e-07!45;UBERON:0003061!5.03e-07!45;UBERON:0004923!5.47e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,8.69e-14,1;UBERON:0001097,8.69e-14,1;UBERON:0003968,8.69e-14,1;UBERON:0001467,8.69e-14,1;UBERON:0002193,1.33e-09,48;UBERON:0002405,1.33e-09,48;UBERON:0002106,4.19e-09,6;UBERON:0004457,4.19e-09,6;UBERON:0000042,4.19e-09,6;UBERON:0004854,4.19e-09,6;UBERON:0009034,4.19e-09,6;UBERON:0002095,4.19e-09,6;UBERON:0004782,4.19e-09,6;UBERON:0003281,4.19e-09,6;UBERON:0009664,4.19e-09,6;UBERON:0002296,4.19e-09,6;UBERON:0005602,4.19e-09,6;UBERON:0001179,4.19e-09,6;UBERON:0006293,4.19e-09,6;UBERON:0002371,7.36e-08,16;UBERON:0002390,2.97e-07,45;UBERON:0003061,2.97e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.607425802169478,0,5.0473946457318,7.54129384831563,4.2438965179803,0,0,0,0.319984845586813,0.68822784320151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68452169692378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.84831672011889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.491589944147214,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0.185194527369712,1.13021074202815,1.91371918809435,0.686334519619568,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.607425802169478,0,5.0473946457318,7.54129384831563,4.2438965179803,0,0,0,0.319984845586813,0.68822784320151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68452169692378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.84831672011889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.491589944147214,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0.185194527369712,1.13021074202815,1.91371918809435,0.686334519619568,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr16:19063387..19063424,+ | |||
}} | }} |
Latest revision as of 03:26, 6 August 2015
Short description: | p@chr16:19063387..19063424, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:19063387..19063424, + |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 8.87e-20 | 6 |
megakaryocyte | 8.87e-20 | 6 |
lymphocyte of B lineage | 1.16e-13 | 1 |
B cell | 1.16e-13 | 1 |
pro-B cell | 1.16e-13 | 1 |
megakaryocyte-erythroid progenitor cell | 1.90e-13 | 9 |
myeloid lineage restricted progenitor cell | 1.59e-09 | 13 |
hematopoietic lineage restricted progenitor cell | 1.43e-08 | 25 |
myeloid cell | 7.36e-08 | 16 |
hematopoietic cell | 8.81e-07 | 32 |
hematopoietic oligopotent progenitor cell | 8.81e-07 | 32 |
hematopoietic stem cell | 8.81e-07 | 32 |
hematopoietic multipotent progenitor cell | 8.81e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
lymph node | 8.69e-14 | 1 |
axillary lymph node | 8.69e-14 | 1 |
peripheral lymph node | 8.69e-14 | 1 |
shoulder | 8.69e-14 | 1 |
hemolymphoid system | 1.33e-09 | 48 |
immune system | 1.33e-09 | 48 |
spleen | 4.19e-09 | 6 |
cavity lining | 4.19e-09 | 6 |
serous membrane | 4.19e-09 | 6 |
gastrointestinal system mesentery | 4.19e-09 | 6 |
stomach region | 4.19e-09 | 6 |
mesentery | 4.19e-09 | 6 |
gastrointestinal system serosa | 4.19e-09 | 6 |
mesentery of stomach | 4.19e-09 | 6 |
gut mesentery | 4.19e-09 | 6 |
dorsal mesentery | 4.19e-09 | 6 |
dorsal mesogastrium | 4.19e-09 | 6 |
peritoneal cavity | 4.19e-09 | 6 |
spleen primordium | 4.19e-09 | 6 |
bone marrow | 7.36e-08 | 16 |
hematopoietic system | 2.97e-07 | 45 |
blood island | 2.97e-07 | 45 |