FFCP PHASE1:Mm9::chr15:80875881..80875895,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr15:80875881..80875895,-
|short_description=p5@Mkl1
|description=CAGE_peak_5_at_Mkl1_5end
|association_with_transcript=11bp_to_uc007wwe.1_5end
|EntrezGene=22...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=223701 | |EntrezGene=223701 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=11bp_to_uc007wwe.1_5end | |||
|cluster_id=chr15:80875881..80875895,- | |||
|description=CAGE_peak_5_at_Mkl1_5end | |||
|id=chr15:80875881..80875895,- | |||
|ontology_enrichment_celltype=CL:0000988!4.79e-10!32;CL:0002032!4.79e-10!32;CL:0000037!4.79e-10!32;CL:0000566!4.79e-10!32;CL:0000837!4.79e-10!32;CL:0000049!1.46e-07!19;CL:0002031!1.52e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.19e-13,32;CL:0002032,1.19e-13,32;CL:0000037,1.19e-13,32;CL:0000837,1.19e-13,32;CL:0002320,1.83e-10,46;CL:0000134,1.83e-10,46;CL:0002031,2.48e-09,25;CL:0000049,2.61e-09,19;CL:0000219,3.52e-08,54;CL:0000763,9.89e-08,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.26e-07,3;DOID:4045,3.26e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002405!2.15e-16!70;UBERON:0002193!5.17e-16!48;UBERON:0002390!1.82e-15!45;UBERON:0003061!1.82e-15!45;UBERON:0005057!3.15e-09!51;UBERON:0004177!9.56e-09!29;UBERON:0001474!2.39e-08!22;UBERON:0004765!2.39e-08!22;UBERON:0001434!2.39e-08!22;UBERON:0003081!6.02e-08!88;UBERON:0002371!8.21e-08!16;UBERON:0002204!3.92e-07!32;UBERON:0000926!4.68e-07!193;UBERON:0004120!4.68e-07!193;UBERON:0006603!4.68e-07!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.05e-18,48;UBERON:0002405,4.05e-18,48;UBERON:0002390,7.83e-18,45;UBERON:0003061,7.83e-18,45;UBERON:0001474,5.45e-13,22;UBERON:0004765,5.45e-13,22;UBERON:0001434,5.45e-13,22;UBERON:0002204,8.36e-13,32;UBERON:0002371,1.27e-11,16;UBERON:0002384,1.83e-10,46;UBERON:0002106,3.55e-10,6;UBERON:0004457,3.55e-10,6;UBERON:0000042,3.55e-10,6;UBERON:0004854,3.55e-10,6;UBERON:0009034,3.55e-10,6;UBERON:0002095,3.55e-10,6;UBERON:0004782,3.55e-10,6;UBERON:0003281,3.55e-10,6;UBERON:0009664,3.55e-10,6;UBERON:0002296,3.55e-10,6;UBERON:0005602,3.55e-10,6;UBERON:0001179,3.55e-10,6;UBERON:0006293,3.55e-10,6;UBERON:0003081,1.42e-09,87;UBERON:0004177,4.86e-08,29;UBERON:0005057,4.86e-08,29;UBERON:0003887,7.55e-08,10;UBERON:0000926,2.85e-07,120;UBERON:0004120,2.85e-07,120;UBERON:0006603,2.85e-07,120 | |||
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| |phase1_expression=0,0,0,0,0,0,0,1.03298658753261,0.140788722151667,0.234064526321993,0,0,1.71200729931206,1.57356724354195,0.999329285446988,2.02475267389826,0.699561878128147,4.10100814965709,3.83920414096069,3.81950686618227,0.340173160604279,2.78014663362479,2.87319768052829,0.95995453676044,0,0,0,0,0.190023419456374,0,0,0,0.61506478758457,0,0,0,0,38.5049100277955,9.37602413428561,30.8879008944541,29.9998058895817,28.6879103682547,29.6161315349004,0,0,0,0,0,0,0,0,0,1.34226084846189,0.725362142011344,6.38578218370682,0,0,0,0,0,0,0,0,0,2.96659908770092,1.4209602298922,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,0,9.06282592765101,0.148442139064825,0.173485326766136,0.304465478312141,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0.86759614151947,7.07688441559899,0.485300549842228,1.54589062922275,1.45462575940567,0,0,0,0.766371165625774,1.43778149407104,0.599902730993408,2.03312363316904,0,0,0,0,0,0,0,0,2.48813941220186,0.252722758433675,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,1.40442637462647,1.80143534980301,2.55747149456033,0,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0,0.162137619091711,0.146199987425332,0.878200461164203,0.268412837520744,0.210289948564127,0,0,0.264450566663544,0,0,0.257734922644187,0,0.22237804384487,0,0.474529061544512,0.164698954724011,0.251335208800269,0.198956472041151,0.974820435595601,0,0.648414149624083,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0.667380422864376,0,0.674586337154561,0.608580364165509,0.72353147925725,0.763877555344259,1.72617682470486,1.13494658742525,0.274561413188081,1.43768206527355,0.372140947668503,0.312037673114561,0.252578877947112,0.717589654087649,0.482443521363367,1.66277871149944,0,0,0,0,0.502518772325447,0,0.195133647857799,0.630540576424764,0.664394068946325,0.797273843287435,1.3109065177259,0.690739927463582,0.723245292907558,3.01582567878545,1.63171705145613,0.491764273019036,0,0.160550589987792,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.659880491890142,0,0,0,0,0,0,0,0,0.356497378384721,0.632073515871632,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0,1.6488625294148,0,0.180938774784468,0.358117032009409,0,0,0,2.9048049735635,1.44470807574256,1.85194527369712,1.69531611304222,2.1871076435364,1.83022538565218,2.71965487990169,2.37917468950219,2.07299960706636,0.954670618015114,0,0.406638934253697,0,0.209088296014469,0,0,0.0826534557253359,0,0.259229946583586,0,0,0,0,0,0,0.168956125490778,0.234714477291508,0,0,0,0,4.10814456816632,0.608175645870493,0.821687657318618,0.77952493786677,1.25318686967237,0.993406773906324,0.841368146639782,1.18151621739662,0.605798699688886,1.37172251979,0.806609481094724,1.26695244961678,0.577271049841977,1.28564592399726,0.226730383615211,0,0,0,0.19318959403219,0.93841237725591,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.367687016900028,0.222246727801615,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.192075457214608,0.17230640686684,0,0,0,0,0.147198920134397,0.342869252385415,0.354951612318675,0.238436189947321,0.290692833264657,0,0.25384382367503,0,0,0.135804113845862,0.561142271657738,0,0.197008964751127,0,0,0.578719832943424,0,0,0.429742108096597,0,0.441182838239031,0.463735671240843 | ||
|short_description=p5@Mkl1 | |||
}} | }} |
Latest revision as of 03:59, 27 September 2015
Short description: | p5@Mkl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Mkl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 11bp_to_uc007wwe.1_5end |
EntrezGene: | Mkl1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.19e-13 | 32 |
hematopoietic oligopotent progenitor cell | 1.19e-13 | 32 |
hematopoietic stem cell | 1.19e-13 | 32 |
hematopoietic multipotent progenitor cell | 1.19e-13 | 32 |
connective tissue cell | 1.83e-10 | 46 |
mesenchymal cell | 1.83e-10 | 46 |
hematopoietic lineage restricted progenitor cell | 2.48e-09 | 25 |
common myeloid progenitor | 2.61e-09 | 19 |
motile cell | 3.52e-08 | 54 |
myeloid cell | 9.89e-08 | 16 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.05e-18 | 48 |
immune system | 4.05e-18 | 48 |
hematopoietic system | 7.83e-18 | 45 |
blood island | 7.83e-18 | 45 |
bone element | 5.45e-13 | 22 |
skeletal element | 5.45e-13 | 22 |
skeletal system | 5.45e-13 | 22 |
musculoskeletal system | 8.36e-13 | 32 |
bone marrow | 1.27e-11 | 16 |
connective tissue | 1.83e-10 | 46 |
spleen | 3.55e-10 | 6 |
cavity lining | 3.55e-10 | 6 |
serous membrane | 3.55e-10 | 6 |
gastrointestinal system mesentery | 3.55e-10 | 6 |
stomach region | 3.55e-10 | 6 |
mesentery | 3.55e-10 | 6 |
gastrointestinal system serosa | 3.55e-10 | 6 |
mesentery of stomach | 3.55e-10 | 6 |
gut mesentery | 3.55e-10 | 6 |
dorsal mesentery | 3.55e-10 | 6 |
dorsal mesogastrium | 3.55e-10 | 6 |
peritoneal cavity | 3.55e-10 | 6 |
spleen primordium | 3.55e-10 | 6 |
lateral plate mesoderm | 1.42e-09 | 87 |
hemopoietic organ | 4.86e-08 | 29 |
immune organ | 4.86e-08 | 29 |
intraembryonic coelom | 7.55e-08 | 10 |
mesoderm | 2.85e-07 | 120 |
mesoderm-derived structure | 2.85e-07 | 120 |
presumptive mesoderm | 2.85e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.26e-07 | 3 |
muscle cancer | 3.26e-07 | 3 |