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|located_in=
|located_in=
|name=presumptive pronephric mesoderm
|name=presumptive pronephric mesoderm
|namespace=
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=
|part_of=

Latest revision as of 18:01, 12 September 2014

Name:presumptive pronephric mesoderm
Namespace:FANTOM
Xrefs:
links:

EFO:0003619
TAO:0001070

ZFA:0001070
Synonyms: "nephron primordium" EXACT [ZFA:0001070]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0006598(presumptive structure)



Children

develops from:UBERON:0005721 (pronephric mesoderm)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007297 (presumptive pronephric mesoderm), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
2.83e-65FFCP PHASE2:Mm9::chr10:127470655..127470664,+#_1e232337bd4a4e39905dc3d306de13f7p@chr10:127470655..127470664, +
2.83e-65FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_1e232337bd4a4e39905dc3d306de13f7p4@Spink12
2.83e-65FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_1e232337bd4a4e39905dc3d306de13f7p4@Spink12
2.83e-65FFCP PHASE2:Mm9::chr14:63665679..63665688,+#_1e232337bd4a4e39905dc3d306de13f7p4@Defb42
2.83e-65FFCP PHASE1:Mm9::chr10:127470655..127470664,+#_1e232337bd4a4e39905dc3d306de13f7p@chr10:127470655..127470664, +
2.83e-65FFCP PHASE2:Mm9::chr14:63585028..63585037,-#_1e232337bd4a4e39905dc3d306de13f7p@chr14:63585028..63585037, -
2.83e-65FFCP PHASE1:Mm9::chr14:63585028..63585037,-#_1e232337bd4a4e39905dc3d306de13f7p@chr14:63585028..63585037, -
2.83e-65FFCP PHASE1:Mm9::chr14:63665679..63665688,+#_1e232337bd4a4e39905dc3d306de13f7p4@Defb42
3.99e-50FFCP PHASE2:Mm9::chr2:152388713..152388729,+#_d6dd81179c58782f35b55349a763402dp@chr2:152388713..152388729, +
3.99e-50FFCP PHASE1:Mm9::chr2:152388713..152388729,+#_d6dd81179c58782f35b55349a763402dp@chr2:152388713..152388729, +
5.6e-50FFCP PHASE1:Hg19::chr2:120409486..120409492,+#_13dbfe779366cc7ace596aff6a2c17a7p@chr2:120409486..120409492, +
5.6e-50FFCP PHASE2:Hg19::chr2:120409486..120409492,+#_13dbfe779366cc7ace596aff6a2c17a7p@chr2:120409486..120409492, +
1.6e-49FFCP PHASE1:Mm9::chr11:76361451..76361499,+#_bbabd0bf32af8f193f9186e017419eddp@chr11:76361451..76361499, +
1.6e-49FFCP PHASE2:Mm9::chr11:105797641..105797656,-#_bbabd0bf32af8f193f9186e017419eddp4@Cyb561
1.6e-49FFCP PHASE2:Mm9::chr14:63585020..63585025,-#_bbabd0bf32af8f193f9186e017419eddp@chr14:63585020..63585025, -
1.6e-49FFCP PHASE1:Mm9::chr14:63585020..63585025,-#_bbabd0bf32af8f193f9186e017419eddp@chr14:63585020..63585025, -
1.6e-49FFCP PHASE1:Mm9::chr11:105797641..105797656,-#_bbabd0bf32af8f193f9186e017419eddp4@Cyb561
1.6e-49FFCP PHASE2:Mm9::chr14:63585048..63585062,-#_bbabd0bf32af8f193f9186e017419eddp@chr14:63585048..63585062, -
1.6e-49FFCP PHASE2:Mm9::chr11:76361451..76361499,+#_bbabd0bf32af8f193f9186e017419eddp@chr11:76361451..76361499, +
1.6e-49FFCP PHASE2:Mm9::chr9:35597686..35597691,-#_bbabd0bf32af8f193f9186e017419eddp2@D730048I06Rik, p2@Gm17727
1.6e-49FFCP PHASE1:Mm9::chr14:63585048..63585062,-#_bbabd0bf32af8f193f9186e017419eddp@chr14:63585048..63585062, -
1.6e-49FFCP PHASE1:Mm9::chr9:35597686..35597691,-#_bbabd0bf32af8f193f9186e017419eddp2@D730048I06Rik, p2@Gm17727
2.33e-49FFCP PHASE2:Mm9::chr9:26611246..26611253,-#_6211d53f99fdb57bae98268cd6f2517bp@chr9:26611246..26611253, -
2.33e-49FFCP PHASE2:Mm9::chr9:26732045..26732085,+#_6211d53f99fdb57bae98268cd6f2517bp@chr9:26732045..26732085, +
2.33e-49FFCP PHASE2:Mm9::chr14:51734043..51734054,+#_6211d53f99fdb57bae98268cd6f2517bp2@Eddm3b
2.33e-49FFCP PHASE1:Mm9::chr9:26732045..26732085,+#_6211d53f99fdb57bae98268cd6f2517bp@chr9:26732045..26732085, +
2.33e-49FFCP PHASE1:Mm9::chr14:51734043..51734054,+#_6211d53f99fdb57bae98268cd6f2517bp2@Eddm3b
2.33e-49FFCP PHASE2:Mm9::chr14:63627556..63627564,-#_6211d53f99fdb57bae98268cd6f2517bp@chr14:63627556..63627564, -
2.33e-49FFCP PHASE1:Mm9::chr9:26611246..26611253,-#_6211d53f99fdb57bae98268cd6f2517bp@chr9:26611246..26611253, -
2.33e-49FFCP PHASE1:Mm9::chr14:63627556..63627564,-#_6211d53f99fdb57bae98268cd6f2517bp@chr14:63627556..63627564, -
3.4e-49FFCP PHASE2:Mm9::chr2:69981027..69981032,+#_602347886880dd3c326b3ec48bc0a67ep@chr2:69981027..69981032, +
3.4e-49FFCP PHASE1:Mm9::chr2:69981027..69981032,+#_602347886880dd3c326b3ec48bc0a67ep@chr2:69981027..69981032, +
9.75e-45FFCP PHASE1:Hg19::chr1:172416185..172416189,-#_05712ab152acb2a54fb81635157a562fp@chr1:172416185..172416189, -
9.75e-45FFCP PHASE2:Hg19::chr10:102505655..102505689,+#_05712ab152acb2a54fb81635157a562fp10@PAX2
9.75e-45FFCP PHASE1:Hg19::chr14:68644730..68644737,+#_05712ab152acb2a54fb81635157a562fp@chr14:68644730..68644737, +
9.75e-45FFCP PHASE2:Hg19::chr1:172416185..172416189,-#_05712ab152acb2a54fb81635157a562fp@chr1:172416185..172416189, -
9.75e-45FFCP PHASE1:Hg19::chr10:102505655..102505689,+#_05712ab152acb2a54fb81635157a562fp10@PAX2
9.75e-45FFCP PHASE2:Hg19::chr14:68644730..68644737,+#_05712ab152acb2a54fb81635157a562fp@chr14:68644730..68644737, +
4.54e-44FFCP PHASE2:Mm9::chr7:6204391..6204398,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p2@Gm6792
4.54e-44FFCP PHASE1:Mm9::chr13:21385325..21385329,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr13:21385325..21385329, -
4.54e-44FFCP PHASE1:Mm9::chr5:77645280..77645295,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr5:77645280..77645295, -
4.54e-44FFCP PHASE1:Mm9::chr2:164479340..164479350,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr2:164479340..164479350, +
4.54e-44FFCP PHASE1:Mm9::chr1:155738967..155738974,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr1:155738967..155738974, +
4.54e-44FFCP PHASE2:Mm9::chr15:75304916..75304925,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr15:75304916..75304925, +
4.54e-44FFCP PHASE2:Mm9::chr9:56469136..56469145,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr9:56469136..56469145, -
4.54e-44FFCP PHASE1:Mm9::chr9:26731771..26731780,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr9:26731771..26731780, -
4.54e-44FFCP PHASE2:Mm9::chr11:96140694..96140720,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr11:96140694..96140720, +
4.54e-44FFCP PHASE1:Mm9::chr19:17585885..17585901,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr19:17585885..17585901, -
4.54e-44FFCP PHASE2:Mm9::chr8:19142604..19142612,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr8:19142604..19142612, +
4.54e-44FFCP PHASE2:Mm9::chr5:75559819..75559830,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr5:75559819..75559830, +
4.54e-44FFCP PHASE2:Mm9::chr1:43367743..43367754,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr1:43367743..43367754, -
4.54e-44FFCP PHASE1:Mm9::chr8:19141447..19141469,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr8:19141447..19141469, +
4.54e-44FFCP PHASE1:Mm9::chr18:44264128..44264135,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p5@Spink12
4.54e-44FFCP PHASE2:Mm9::chr8:25706083..25706089,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p4@Ido1
4.54e-44FFCP PHASE1:Mm9::chr18:44319583..44319592,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr18:44319583..44319592, -
4.54e-44FFCP PHASE1:Mm9::chr11:53955299..53955306,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr11:53955299..53955306, +
4.54e-44FFCP PHASE2:Mm9::chrX:75798114..75798125,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chrX:75798114..75798125, -
4.54e-44FFCP PHASE2:Mm9::chr18:74784728..74784738,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr18:74784728..74784738, +
4.54e-44FFCP PHASE1:Mm9::chr5:66513886..66513897,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr5:66513886..66513897, -
4.54e-44FFCP PHASE1:Mm9::chr2:164439019..164439029,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p1@Wfdc6b
4.54e-44FFCP PHASE1:Mm9::chr14:103746280..103746298,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr14:103746280..103746298, +
4.54e-44FFCP PHASE2:Mm9::chr1:89597725..89597743,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr1:89597725..89597743, +
4.54e-44FFCP PHASE2:Mm9::chr13:21378774..21378782,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr13:21378774..21378782, -
4.54e-44FFCP PHASE1:Mm9::chrX:75798132..75798152,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chrX:75798132..75798152, -
4.54e-44FFCP PHASE2:Mm9::chrX:10488683..10488691,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chrX:10488683..10488691, +
4.54e-44FFCP PHASE2:Mm9::chr11:116901496..116901514,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p1@ENSMUST00000150628, p1@ENSMUST00000152401, p1@uc007mmw.1
4.54e-44FFCP PHASE1:Mm9::chr13:21379098..21379104,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr13:21379098..21379104, -
4.54e-44FFCP PHASE2:Mm9::chr15:72756032..72756041,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr15:72756032..72756041, -
4.54e-44FFCP PHASE2:Mm9::chr11:105798218..105798228,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr11:105798218..105798228, -
4.54e-44FFCP PHASE1:Mm9::chrX:156776465..156776473,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chrX:156776465..156776473, -
4.54e-44FFCP PHASE2:Mm9::chr1:155698178..155698191,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr1:155698178..155698191, -
4.54e-44FFCP PHASE1:Mm9::chr1:11079838..11079844,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr1:11079838..11079844, +
4.54e-44FFCP PHASE2:Mm9::chrX:20219008..20219045,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chrX:20219008..20219045, +
4.54e-44FFCP PHASE1:Mm9::chr9:56469136..56469145,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr9:56469136..56469145, -
4.54e-44FFCP PHASE2:Mm9::chr9:26599476..26599505,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p3@Glb1l2
4.54e-44FFCP PHASE1:Mm9::chr12:16663110..16663116,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p3@Ntsr2
4.54e-44FFCP PHASE2:Mm9::chrX:160347529..160347538,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chrX:160347529..160347538, +
4.54e-44FFCP PHASE2:Mm9::chr17:35249011..35249020,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr17:35249011..35249020, -
4.54e-44FFCP PHASE1:Mm9::chr5:124447371..124447383,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr5:124447371..124447383, +
4.54e-44FFCP PHASE2:Mm9::chr2:160573065..160573077,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr2:160573065..160573077, +
4.54e-44FFCP PHASE1:Mm9::chr4:134913640..134913649,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr4:134913640..134913649, +
4.54e-44FFCP PHASE2:Mm9::chr14:51627616..51627623,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p2@Rnase10
4.54e-44FFCP PHASE1:Mm9::chr14:51670340..51670346,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr14:51670340..51670346, -
4.54e-44FFCP PHASE2:Mm9::chr13:21379125..21379144,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr13:21379125..21379144, -
4.54e-44FFCP PHASE1:Mm9::chr9:35651807..35651818,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p3@9230110F15Rik
4.54e-44FFCP PHASE2:Mm9::chr14:63611303..63611312,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr14:63611303..63611312, +
4.54e-44FFCP PHASE1:Mm9::chr6:54359310..54359337,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr6:54359310..54359337, -
4.54e-44FFCP PHASE2:Mm9::chr5:31379486..31379501,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr5:31379486..31379501, +
4.54e-44FFCP PHASE1:Mm9::chr2:148676901..148676906,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p8@9230104L09Rik
4.54e-44FFCP PHASE1:Mm9::chr11:34107586..34107593,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr11:34107586..34107593, -
4.54e-44FFCP PHASE2:Mm9::chr13:52712744..52712754,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr13:52712744..52712754, +
4.54e-44FFCP PHASE1:Mm9::chr13:21379430..21379437,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr13:21379430..21379437, -
4.54e-44FFCP PHASE2:Mm9::chr13:21380670..21380678,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr13:21380670..21380678, -
4.54e-44FFCP PHASE2:Mm9::chr2:74440187..74440209,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr2:74440187..74440209, -
4.54e-44FFCP PHASE2:Mm9::chr14:52542661..52542668,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p3@Rnase13
4.54e-44FFCP PHASE1:Mm9::chr18:46301295..46301302,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr18:46301295..46301302, -
4.54e-44FFCP PHASE1:Mm9::chr12:110131610..110131621,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p11@Wars
4.54e-44FFCP PHASE2:Mm9::chrX:156829476..156829504,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chrX:156829476..156829504, +
4.54e-44FFCP PHASE2:Mm9::chr5:110773795..110773801,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr5:110773795..110773801, +
4.54e-44FFCP PHASE2:Mm9::chr9:26719400..26719404,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr9:26719400..26719404, -