UBERON:0004810: Difference between revisions
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|located_in= | |located_in= | ||
|name=nephron tubule epithelium | |name=nephron tubule epithelium | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0001231 | |part_of=UBERON:0001231 | ||
Latest revision as of 17:48, 12 September 2014
| Name: | nephron tubule epithelium | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "An epithelium that is part of a nephron tubule [Obol]." [OBOL:automatic] | ||
| Xrefs: |
| ||
| Synonyms: |
"epithelial tissue of nephron tubule" EXACT [OBOL:automatic] "epithelial tissue of renal tubule" EXACT [OBOL:automatic] "epithelial tissue of tubulus renalis" EXACT [OBOL:automatic] "epithelium of nephron tubule" EXACT [OBOL:automatic] "epithelium of renal tubule" EXACT [OBOL:automatic] "epithelium of tubulus renalis" EXACT [OBOL:automatic] "nephron tubule epithelial tissue" EXACT [OBOL:automatic] "nephron tubule epithelium" EXACT [OBOL:automatic] "renal tubule epithelial tissue" EXACT [OBOL:automatic] "tubulus renalis epithelial tissue" EXACT [OBOL:automatic] "tubulus renalis epithelium" EXACT [OBOL:automatic] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0004211(nephron epithelium) |
|---|---|
| part_of: | UBERON:0001231(nephron tubule) |
Children
| is a: | UBERON:0007685 (region of nephron tubule) |
|---|---|
| part of: | CL:1000494 (nephron tubule epithelial cell) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11515-119H3 (Renal Proximal Tubular Epithelial Cell, donor1)
- 11516-119H4 (Renal Cortical Epithelial Cells, donor1)
- 11517-119H5 (Renal Epithelial Cells, donor1)
- 11518-119H6 (Renal Mesangial Cells, donor1)
- 11595-120H2 (Renal Proximal Tubular Epithelial Cell, donor2)
- 11596-120H3 (Renal Cortical Epithelial Cells, donor2)
- 11597-120H4 (Renal Epithelial Cells, donor2)
- 11598-120H5 (Renal Mesangial Cells, donor2)
- 11676-122H2 (Renal Proximal Tubular Epithelial Cell, donor3)
- 11677-122H3
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004810 (nephron tubule epithelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 3.6e-125 | FFCP PHASE2:Hg19::chr15:66420804..66420837,-#_661ae4b5e7d9de4463bf261f705e6aa3 | p4@MEGF11 |
| 3.6e-125 | FFCP PHASE1:Hg19::chr15:66420804..66420837,-#_661ae4b5e7d9de4463bf261f705e6aa3 | p4@MEGF11 |
| 4.27e-99 | FFCP PHASE1:Hg19::chr1:1100457..1100470,+#_8b266201f1c7ab01fb5dbbcea59ae589 | p@chr1:1100457..1100470, + |
| 4.27e-99 | FFCP PHASE2:Hg19::chr1:1100457..1100470,+#_8b266201f1c7ab01fb5dbbcea59ae589 | p@chr1:1100457..1100470, + |
| 6.34e-89 | FFCP PHASE2:Hg19::chr2:693380..693398,+#_659b7fab47e5e016c442289e52614903 | p@chr2:693380..693398, + |
| 6.34e-89 | FFCP PHASE1:Hg19::chr2:693380..693398,+#_659b7fab47e5e016c442289e52614903 | p@chr2:693380..693398, + |
| 6.95e-79 | FFCP PHASE1:Hg19::chr1:81001398..81001426,+#_543c49f75d8e8bced080f411968077a2 | p1@ENST00000418041, p1@ENST00000443104 |
| 6.95e-79 | FFCP PHASE2:Hg19::chr1:81001398..81001426,+#_543c49f75d8e8bced080f411968077a2 | p1@ENST00000418041, p1@ENST00000443104 |
| 1.14e-78 | FFCP PHASE2:Hg19::chr7:27219833..27219845,-#_dfb13bb7453a5adb0a8f3db77ca8767c | p7@HOXA10 |
| 1.14e-78 | FFCP PHASE1:Hg19::chr7:27219833..27219845,-#_dfb13bb7453a5adb0a8f3db77ca8767c | p7@HOXA10 |
| 2.82e-76 | FFCP PHASE2:Hg19::chr7:7606139..7606151,-#_c7d0e8490b368c62cd9ca3e89414eede | p@chr7:7606139..7606151, - |
| 2.82e-76 | FFCP PHASE1:Hg19::chr7:7606139..7606151,-#_c7d0e8490b368c62cd9ca3e89414eede | p@chr7:7606139..7606151, - |
| 2.46e-75 | FFCP PHASE1:Hg19::chr10:102505954..102505973,+#_36e516515532089c153aa43902922529 | p3@PAX2 |
| 2.46e-75 | FFCP PHASE2:Hg19::chr10:102505954..102505973,+#_36e516515532089c153aa43902922529 | p3@PAX2 |
| 2.88e-75 | FFCP PHASE2:Hg19::chr18:3456189..3456200,+#_31eccac14d9118a30786456380a4c072 | p@chr18:3456189..3456200, + |
| 2.88e-75 | FFCP PHASE1:Hg19::chr18:3456189..3456200,+#_31eccac14d9118a30786456380a4c072 | p@chr18:3456189..3456200, + |
| 1.48e-74 | FFCP PHASE1:Hg19::chr21:41029235..41029269,+#_c554f9cd77fbc1fea0cd668f3afebdbe | p2@B3GALT5 |
| 1.48e-74 | FFCP PHASE2:Hg19::chr21:41029235..41029269,+#_c554f9cd77fbc1fea0cd668f3afebdbe | p2@B3GALT5 |
| 2.7e-74 | FFCP PHASE2:Hg19::chr7:140227349..140227360,-#_004187c9a104d5847876009da1ce3315 | p@chr7:140227349..140227360, - |
| 2.7e-74 | FFCP PHASE1:Hg19::chr7:140227349..140227360,-#_004187c9a104d5847876009da1ce3315 | p@chr7:140227349..140227360, - |
| 5.32e-74 | FFCP PHASE1:Hg19::chr10:102495147..102495159,+#_427a9525a4cb541932794ce2284dcfeb | p4@PAX2 |
| 5.32e-74 | FFCP PHASE2:Hg19::chr10:102495147..102495159,+#_427a9525a4cb541932794ce2284dcfeb | p4@PAX2 |
| 5.85e-74 | FFCP PHASE1:Hg19::chr9:133986782..133986794,+#_8ac0e2dc05e298e7078174d508648b98 | p4@AIF1L |
| 5.85e-74 | FFCP PHASE2:Hg19::chr9:133986782..133986794,+#_8ac0e2dc05e298e7078174d508648b98 | p4@AIF1L |
| 1.31e-72 | FFCP PHASE2:Hg19::chr20:6034607..6034616,-#_efdd51489e62ec0acca29f37490be6f3 | p6@LRRN4 |
| 1.31e-72 | FFCP PHASE1:Hg19::chr20:6034607..6034616,-#_efdd51489e62ec0acca29f37490be6f3 | p6@LRRN4 |
| 1.88e-70 | FFCP PHASE1:Hg19::chr20:6033532..6033548,-#_dde46130c24198bad8c13ba6470c9ceb | p2@AB527789 |
| 1.88e-70 | FFCP PHASE2:Hg19::chr20:6033532..6033548,-#_dde46130c24198bad8c13ba6470c9ceb | p2@AB527789 |
| 1.06e-64 | FFCP PHASE1:Hg19::chr16:3068288..3068312,-#_31f190bc7ba1d0062103430f607421e5 | p2@CLDN6 |
| 1.06e-64 | FFCP PHASE2:Hg19::chr16:3068288..3068312,-#_31f190bc7ba1d0062103430f607421e5 | p2@CLDN6 |
| 2.76e-64 | FFCP PHASE2:Hg19::chr7:98453821..98453843,-#_cb793c2f88170672e2575e4968587e25 | p@chr7:98453821..98453843, - |
| 2.76e-64 | FFCP PHASE1:Hg19::chr7:98453821..98453843,-#_cb793c2f88170672e2575e4968587e25 | p@chr7:98453821..98453843, - |
| 1.24e-63 | FFCP PHASE1:Hg19::chr16:86604624..86604648,+#_4bc2dd73f0745d0724a07f1233c0ec94 | p@chr16:86604624..86604648, + |
| 1.24e-63 | FFCP PHASE2:Hg19::chr16:86604624..86604648,+#_4bc2dd73f0745d0724a07f1233c0ec94 | p@chr16:86604624..86604648, + |
| 4.48e-60 | FFCP PHASE2:Hg19::chr9:133986807..133986821,+#_e775e7e5cc05e80e28aedcc9b3516f6c | p3@AIF1L |
| 4.48e-60 | FFCP PHASE1:Hg19::chr9:133986807..133986821,+#_e775e7e5cc05e80e28aedcc9b3516f6c | p3@AIF1L |
| 1.1e-59 | FFCP PHASE2:Hg19::chr1:20465872..20465881,+#_849c01fc76a6ec663a87349e1f25bd61 | p2@PLA2G2F |
| 1.1e-59 | FFCP PHASE1:Hg19::chr1:20465872..20465881,+#_849c01fc76a6ec663a87349e1f25bd61 | p2@PLA2G2F |
| 2.05e-59 | FFCP PHASE2:Hg19::chr2:31361432..31361442,-#_73d49992371e85bc1fba41ed6770f4ee | p6@GALNT14 |
| 2.05e-59 | FFCP PHASE1:Hg19::chr2:31361432..31361442,-#_73d49992371e85bc1fba41ed6770f4ee | p6@GALNT14 |
| 8.36e-59 | FFCP PHASE2:Hg19::chr20:6033120..6033128,-#_473f1fde4a22e5ccbf93942e6ef7c001 | p4@AB527789 |
| 8.36e-59 | FFCP PHASE1:Hg19::chr20:6033120..6033128,-#_473f1fde4a22e5ccbf93942e6ef7c001 | p4@AB527789 |
| 7.62e-57 | FFCP PHASE2:Hg19::chr7:27219754..27219759,-#_58e6a9b91ae71514a0f484f7198cd997 | p16@HOXA10 |
| 7.62e-57 | FFCP PHASE1:Hg19::chr7:27219754..27219759,-#_58e6a9b91ae71514a0f484f7198cd997 | p16@HOXA10 |
| 1.32e-55 | FFCP PHASE2:Hg19::chr21:46826248..46826282,-#_4d6768b9a17fc4dfe2fd6fafc8fa2632 | p@chr21:46826248..46826282, - |
| 1.32e-55 | FFCP PHASE1:Hg19::chr21:46826248..46826282,-#_4d6768b9a17fc4dfe2fd6fafc8fa2632 | p@chr21:46826248..46826282, - |
| 6.62e-55 | FFCP PHASE2:Hg19::chr2:693362..693373,+#_c0362d9e8d92b7b2f1b5f6281e721439 | p@chr2:693362..693373, + |
| 6.62e-55 | FFCP PHASE1:Hg19::chr2:693362..693373,+#_c0362d9e8d92b7b2f1b5f6281e721439 | p@chr2:693362..693373, + |
| 1.99e-53 | FFCP PHASE2:Hg19::chr17:36104873..36104903,-#_ff9e22e9bc5ed729477b79c5aadd1f31 | p3@HNF1B |
| 1.99e-53 | FFCP PHASE1:Hg19::chr17:36104873..36104903,-#_ff9e22e9bc5ed729477b79c5aadd1f31 | p3@HNF1B |
| 7.76e-53 | FFCP PHASE1:Hg19::chr10:102505493..102505546,+#_df9adab73bc5c5cebf5879ec81b42a91 | p2@PAX2 |
| 7.76e-53 | FFCP PHASE2:Hg19::chr10:102505493..102505546,+#_df9adab73bc5c5cebf5879ec81b42a91 | p2@PAX2 |
| 2.69e-52 | FFCP PHASE2:Hg19::chr9:71735910..71735923,+#_2216a689ac2988a78c520a54d6fa12f1 | p16@TJP2 |
| 2.69e-52 | FFCP PHASE1:Hg19::chr9:71735910..71735923,+#_2216a689ac2988a78c520a54d6fa12f1 | p16@TJP2 |
| 1.51e-50 | FFCP PHASE2:Hg19::chr14:57960456..57960478,-#_3ffeacecd27514ebd4f2f2db68407c1b | p2@C14orf105 |
| 1.51e-50 | FFCP PHASE1:Hg19::chr14:57960456..57960478,-#_3ffeacecd27514ebd4f2f2db68407c1b | p2@C14orf105 |
| 2.93e-50 | FFCP PHASE2:Hg19::chr3:190105935..190105966,+#_8787d7c41f7b5b6b61e65eb01b40c8cd | p1@CLDN16 |
| 2.93e-50 | FFCP PHASE1:Hg19::chr3:190105935..190105966,+#_8787d7c41f7b5b6b61e65eb01b40c8cd | p1@CLDN16 |
| 4.36e-50 | FFCP PHASE1:Hg19::chr5:74244100..74244117,+#_a485b86db67af0464256152fec2929b8 | p@chr5:74244100..74244117, + |
| 4.36e-50 | FFCP PHASE2:Hg19::chr5:74244100..74244117,+#_a485b86db67af0464256152fec2929b8 | p@chr5:74244100..74244117, + |
| 4.9e-49 | FFCP PHASE2:Hg19::chr7:140227303..140227330,-#_131017291313867167e36ee2ccef2131 | p@chr7:140227303..140227330, - |
| 4.9e-49 | FFCP PHASE1:Hg19::chr7:140227303..140227330,-#_131017291313867167e36ee2ccef2131 | p@chr7:140227303..140227330, - |
| 3.7e-48 | FFCP PHASE2:Hg19::chr7:7606153..7606181,-#_e1f90a87a29b01d2d8f362e053a74076 | p@chr7:7606153..7606181, - |
| 3.7e-48 | FFCP PHASE1:Hg19::chr7:7606153..7606181,-#_e1f90a87a29b01d2d8f362e053a74076 | p@chr7:7606153..7606181, - |
| 8.06e-47 | FFCP PHASE2:Hg19::chr17:35293932..35293947,-#_d3a8c9be1f1f1a976edfa10d54d23521 | p2@ENST00000529264 |
| 8.06e-47 | FFCP PHASE1:Hg19::chr17:35293932..35293947,-#_d3a8c9be1f1f1a976edfa10d54d23521 | p2@ENST00000529264 |
| 8.19e-47 | FFCP PHASE1:Hg19::chr6:24358114..24358125,-#_5ad2ced81d478d05e50730be4efc03ff | p4@DCDC2 |
| 8.19e-47 | FFCP PHASE2:Hg19::chr6:24358114..24358125,-#_5ad2ced81d478d05e50730be4efc03ff | p4@DCDC2 |
| 1.44e-46 | FFCP PHASE2:Hg19::chr2:177016336..177016350,+#_13580d4d2275b1da009b59443e93154f | p1@HOXD4 |
| 1.44e-46 | FFCP PHASE1:Hg19::chr2:177016336..177016350,+#_13580d4d2275b1da009b59443e93154f | p1@HOXD4 |
| 3.39e-46 | FFCP PHASE2:Hg19::chr7:27219849..27219867,-#_87c3b365e06ee69939588c556e9c94c1 | p6@HOXA10 |
| 3.39e-46 | FFCP PHASE1:Hg19::chr7:27219849..27219867,-#_87c3b365e06ee69939588c556e9c94c1 | p6@HOXA10 |
| 5.96e-46 | FFCP PHASE2:Hg19::chr20:6034576..6034592,-#_0d41329f581e400524055c32be044f33 | p3@LRRN4 |
| 5.96e-46 | FFCP PHASE1:Hg19::chr20:6034576..6034592,-#_0d41329f581e400524055c32be044f33 | p3@LRRN4 |
| 1.77e-45 | FFCP PHASE2:Hg19::chr2:165603346..165603357,-#_2d19075d1c141923f254b683a0499b07 | p@chr2:165603346..165603357, - |
| 1.77e-45 | FFCP PHASE1:Hg19::chr2:165603346..165603357,-#_2d19075d1c141923f254b683a0499b07 | p@chr2:165603346..165603357, - |
| 5.1e-45 | FFCP PHASE2:Hg19::chr6:30890599..30890626,+#_19e13a927c759fc7ae9d81dbd95150ef | p4@VARS2 |
| 5.1e-45 | FFCP PHASE1:Hg19::chr6:30890599..30890626,+#_19e13a927c759fc7ae9d81dbd95150ef | p4@VARS2 |
| 5.13e-45 | FFCP PHASE2:Hg19::chr9:133986740..133986750,+#_0dbfb9735ab69a9d0906433c599594ec | p7@AIF1L |
| 5.13e-45 | FFCP PHASE1:Hg19::chr9:133986740..133986750,+#_0dbfb9735ab69a9d0906433c599594ec | p7@AIF1L |
| 5.16e-45 | FFCP PHASE1:Hg19::chr20:62327738..62327751,+#_1dbbfc732b92a2d8fae6d5e3be4f7ea8 | p2@TNFRSF6B |
| 5.16e-45 | FFCP PHASE2:Hg19::chr20:62327738..62327751,+#_1dbbfc732b92a2d8fae6d5e3be4f7ea8 | p2@TNFRSF6B |
| 6.97e-45 | FFCP PHASE2:Hg19::chr9:112260040..112260045,+#_400632b59a0318733cf3fca4af1a1f5a | p@chr9:112260040..112260045, + |
| 6.97e-45 | FFCP PHASE1:Hg19::chr9:112260040..112260045,+#_400632b59a0318733cf3fca4af1a1f5a | p@chr9:112260040..112260045, + |
| 7.39e-45 | FFCP PHASE2:Hg19::chr20:6034241..6034256,-#_adf52885e250e2c450d52dec3536d2ca | p@chr20:6034241..6034256, - |
| 7.39e-45 | FFCP PHASE1:Hg19::chr20:6034241..6034256,-#_adf52885e250e2c450d52dec3536d2ca | p@chr20:6034241..6034256, - |
| 1.28e-44 | FFCP PHASE1:Hg19::chr10:102505312..102505320,+#_a805829427e6028e5457e620b6309b49 | p6@PAX2 |
| 1.28e-44 | FFCP PHASE2:Hg19::chr10:102505312..102505320,+#_a805829427e6028e5457e620b6309b49 | p6@PAX2 |
| 1.67e-44 | FFCP PHASE2:Hg19::chr9:119741711..119741743,-#_063fc2caf4b8ad3013b18dda9d974abc | p@chr9:119741711..119741743, - |
| 1.67e-44 | FFCP PHASE1:Hg19::chr9:119741711..119741743,-#_063fc2caf4b8ad3013b18dda9d974abc | p@chr9:119741711..119741743, - |
| 4.94e-44 | FFCP PHASE2:Hg19::chr7:27160553..27160560,+#_c690bda1dd3995a94973a908cd7c3ce1 | p1@ENST00000523364, p1@uc010kux.1 |
| 4.94e-44 | FFCP PHASE1:Hg19::chr7:27160553..27160560,+#_c690bda1dd3995a94973a908cd7c3ce1 | p1@ENST00000523364, p1@uc010kux.1 |
| 9.32e-44 | FFCP PHASE2:Hg19::chr11:117688216..117688234,-#_15c8c1ee3a3c045295ceb45948d9b250 | p2@DSCAML1 |
| 9.32e-44 | FFCP PHASE1:Hg19::chr11:117688216..117688234,-#_15c8c1ee3a3c045295ceb45948d9b250 | p2@DSCAML1 |
| 1.2e-43 | FFCP PHASE2:Hg19::chr1:47655966..47655990,-#_20cb698e2f26e0820a33e6799ef37368 | p2@PDZK1IP1 |
| 1.2e-43 | FFCP PHASE1:Hg19::chr1:47655966..47655990,-#_20cb698e2f26e0820a33e6799ef37368 | p2@PDZK1IP1 |
| 1.45e-43 | FFCP PHASE1:Hg19::chr11:117695245..117695263,-#_ed3074c976eedee9013f536a89ef71c5 | p7@FXYD2 |
| 1.45e-43 | FFCP PHASE2:Hg19::chr11:117695245..117695263,-#_ed3074c976eedee9013f536a89ef71c5 | p7@FXYD2 |
| 5.15e-43 | FFCP PHASE2:Hg19::chr10:91043420..91043437,+#_8677a49b791b800ec1f5a0b45454048f | p1@ENST00000444849 |
| 5.15e-43 | FFCP PHASE1:Hg19::chr10:91043420..91043437,+#_8677a49b791b800ec1f5a0b45454048f | p1@ENST00000444849 |
