FFCP PHASE1:Hg19::chr7:134653818..134653846,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport= | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=800 | |EntrezGene=800 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=1441 | |HGNC=1441 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-418bp_to_AJ223812_5end | |association_with_transcript=-418bp_to_AJ223812_5end | ||
|cluster_id=chr7:134653818..134653846,+ | |||
|coexpression_cluster_id=C320 | |coexpression_cluster_id=C320 | ||
|description=CAGE_peak_26_at_CALD1_5end | |description=CAGE_peak_26_at_CALD1_5end | ||
Latest revision as of 12:36, 16 September 2015
| Short description: | p26@CALD1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_26_at_CALD1_5end |
| Coexpression cluster: | C320_Olfactory_Ewing_smooth_hepatic_Hair_Mesenchymal_Preadipocyte |
| Association with transcript: | -418bp_to_AJ223812_5end |
| EntrezGene: | CALD1 |
| HGNC: | 1441 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p26@CALD1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| fibroblast | 1.97e-15 | 76 |
| multi fate stem cell | 2.87e-10 | 427 |
| somatic stem cell | 9.53e-10 | 433 |
| stem cell | 4.42e-09 | 441 |
| skin fibroblast | 5.25e-09 | 23 |
| smooth muscle cell | 4.65e-08 | 43 |
| smooth muscle myoblast | 4.65e-08 | 43 |
| hair follicle cell | 2.14e-07 | 5 |
| fat cell | 3.52e-07 | 15 |
Showing 1 to 9 of 9 entries
| Ontology term | p-value | n |
|---|---|---|
| omentum | 6.04e-10 | 6 |
| peritoneum | 6.04e-10 | 6 |
| abdominal cavity | 6.04e-10 | 6 |
| visceral peritoneum | 6.04e-10 | 6 |
| skin of body | 8.55e-09 | 41 |
| integument | 2.91e-08 | 46 |
| integumental system | 2.91e-08 | 46 |
| hair follicle | 2.14e-07 | 5 |
| hair follicle placode | 2.14e-07 | 5 |
| smooth muscle tissue | 2.45e-07 | 15 |
Showing 1 to 10 of 10 entries
