FFCP PHASE1:Hg19::chr5:35089843..35089860,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=5618 | |EntrezGene=5618 | ||
| Line 8: | Line 8: | ||
|UniProt=P16471,Q8TD76 | |UniProt=P16471,Q8TD76 | ||
|association_with_transcript=-78bp_to_uc003jjg.1,uc003jjh.1,uc003jji.1,uc003jjj.1,uc003jjk.1,uc003jjl.3_5end | |association_with_transcript=-78bp_to_uc003jjg.1,uc003jjh.1,uc003jji.1,uc003jjj.1,uc003jjk.1,uc003jjl.3_5end | ||
|cluster_id=chr5:35089843..35089860,- | |||
|coexpression_cluster_id=C160 | |coexpression_cluster_id=C160 | ||
|description=CAGE_peak_7_at_PRLR_5end | |description=CAGE_peak_7_at_PRLR_5end | ||
Latest revision as of 18:09, 17 September 2015
| Short description: | p7@PRLR |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_7_at_PRLR_5end |
| Coexpression cluster: | C160_medulla_Hepatocyte_retina_corpus_liver_pineal_cerebral |
| Association with transcript: | -78bp_to_uc003jjg.1, uc003jjh.1, uc003jji.1, uc003jjj.1, uc003jjk.1, uc003jjl.3_5end |
| EntrezGene: | PRLR |
| HGNC: | 9446 |
| UniProt: | P16471Q8TD76 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p7@PRLR |
|---|
0
5
10
15
20
25
30
35
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| chorionic membrane mesenchymal stem cell | 1.30e-08 | 3 |
Showing 1 to 1 of 1 entries
| Ontology term | p-value | n |
|---|---|---|
| medulla oblongata | 9.82e-67 | 3 |
| myelencephalon | 9.82e-67 | 3 |
| future myelencephalon | 9.82e-67 | 3 |
| brainstem | 7.51e-34 | 6 |
| corpus callosum | 1.67e-23 | 1 |
| central nervous system cell part cluster | 1.67e-23 | 1 |
| axon tract | 1.67e-23 | 1 |
| intercerebral commissure | 1.67e-23 | 1 |
| dorsal telencephalic commissure | 1.67e-23 | 1 |
| brain white matter | 1.67e-23 | 1 |
Showing 1 to 10 of 43 entries
