FFCP PHASE1:Mm9::chr13:93346120..93346155,-: Difference between revisions
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|id=chr13:93346120..93346155,-
|short_description=p1@Spz1
|description=CAGE_peak_1_at_Spz1_5end
|association_with_transcript=31bp_to_ENSMUST00000050658,NM_030237,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=79401 | |EntrezGene=79401 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=Q99MY0 | |UniProt=Q99MY0 | ||
|association_with_transcript=31bp_to_ENSMUST00000050658,NM_030237,uc007rkr.2_5end | |||
|cluster_id=chr13:93346120..93346155,- | |||
|description=CAGE_peak_1_at_Spz1_5end | |||
|id=chr13:93346120..93346155,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!1.67e-12!15;UBERON:0003101!1.01e-11!16;UBERON:0000079!1.01e-11!16;UBERON:0001301!1.14e-10!3;UBERON:0006555!1.14e-10!3;UBERON:0005103!1.14e-10!3;UBERON:0000083!1.14e-10!3;UBERON:0009201!1.14e-10!3;UBERON:0004819!1.14e-10!3;UBERON:0006553!1.14e-10!3;UBERON:0003074!1.14e-10!3;UBERON:0003060!1.14e-10!3;UBERON:0000473!6.82e-09!14;UBERON:0001374!2.06e-08!1;UBERON:0001630!2.06e-08!1;UBERON:0004252!2.06e-08!1;UBERON:0003663!2.06e-08!1;UBERON:0001383!2.06e-08!1;UBERON:0005090!2.06e-08!1;UBERON:0003661!2.06e-08!1;UBERON:0000080!3.16e-08!4;UBERON:0005904!3.16e-08!4;UBERON:0006947!3.16e-08!4;UBERON:0002120!3.16e-08!4;UBERON:0004054!3.16e-08!4;UBERON:0004875!3.16e-08!4;UBERON:0004876!3.16e-08!4;UBERON:0005721!3.16e-08!4;UBERON:0005754!3.16e-08!4;UBERON:0007297!3.16e-08!4;UBERON:0003133!8.30e-08!24;UBERON:0004176!2.32e-07!17;UBERON:0009196!2.32e-07!17;UBERON:0009117!2.32e-07!17;UBERON:0005156!3.35e-07!26;UBERON:0000990!3.35e-07!26;UBERON:0000991!5.80e-07!18;UBERON:0005564!5.80e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,2.09e-18,15;UBERON:0003101,2.82e-17,16;UBERON:0000079,2.82e-17,16;UBERON:0001301,3.97e-15,3;UBERON:0006555,3.97e-15,3;UBERON:0005103,3.97e-15,3;UBERON:0000083,3.97e-15,3;UBERON:0009201,3.97e-15,3;UBERON:0004819,3.97e-15,3;UBERON:0006553,3.97e-15,3;UBERON:0003074,3.97e-15,3;UBERON:0003060,3.97e-15,3;UBERON:0000473,5.60e-13,14;UBERON:0003133,1.31e-11,24;UBERON:0000080,1.33e-11,4;UBERON:0005904,1.33e-11,4;UBERON:0006947,1.33e-11,4;UBERON:0002120,1.33e-11,4;UBERON:0004054,1.33e-11,4;UBERON:0004875,1.33e-11,4;UBERON:0004876,1.33e-11,4;UBERON:0005721,1.33e-11,4;UBERON:0005754,1.33e-11,4;UBERON:0007297,1.33e-11,4;UBERON:0004176,9.15e-11,17;UBERON:0009196,9.15e-11,17;UBERON:0009117,9.15e-11,17;UBERON:0005156,9.82e-11,26;UBERON:0000990,9.82e-11,26;UBERON:0000991,3.44e-10,18;UBERON:0005564,3.44e-10,18;UBERON:0003886,2.13e-07,38;UBERON:0002553,3.27e-07,39;UBERON:0000058,5.00e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,445.456753811303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.2231032824241,0,0,0,0,0,0,0,0,0,0,53.8947912273963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36847667671102,13.6470289554184,0,0,0,0,0.150704817835715,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,2959.95162103068,0,0,0,0,0,0,0,0,14.0118790079084,836.151108166583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,445.456753811303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.2231032824241,0,0,0,0,0,0,0,0,0,0,53.8947912273963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36847667671102,13.6470289554184,0,0,0,0,0.150704817835715,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,2959.95162103068,0,0,0,0,0,0,0,0,14.0118790079084,836.151108166583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@Spz1 | |||
}} | }} |
Latest revision as of 00:23, 2 October 2015
Short description: | p1@Spz1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Spz1_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 31bp_to_ENSMUST00000050658, NM_030237, uc007rkr.2_5end |
EntrezGene: | Spz1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 2.09e-18 | 15 |
male organism | 2.82e-17 | 16 |
male reproductive system | 2.82e-17 | 16 |
epididymis | 3.97e-15 | 3 |
excretory tube | 3.97e-15 | 3 |
mesonephric epithelium | 3.97e-15 | 3 |
mesonephric tubule | 3.97e-15 | 3 |
nephric duct | 3.97e-15 | 3 |
kidney epithelium | 3.97e-15 | 3 |
renal duct | 3.97e-15 | 3 |
mesonephric duct | 3.97e-15 | 3 |
pronephric duct | 3.97e-15 | 3 |
testis | 5.60e-13 | 14 |
reproductive organ | 1.31e-11 | 24 |
mesonephros | 1.33e-11 | 4 |
duct of male reproductive system | 1.33e-11 | 4 |
male genital duct | 1.33e-11 | 4 |
pronephros | 1.33e-11 | 4 |
internal male genitalia | 1.33e-11 | 4 |
nephrogenic cord | 1.33e-11 | 4 |
urogenital ridge | 1.33e-11 | 4 |
pronephric mesoderm | 1.33e-11 | 4 |
rostral part of nephrogenic cord | 1.33e-11 | 4 |
presumptive pronephric mesoderm | 1.33e-11 | 4 |
external genitalia | 9.15e-11 | 17 |
indifferent external genitalia | 9.15e-11 | 17 |
indifferent gonad | 9.15e-11 | 17 |
reproductive structure | 9.82e-11 | 26 |
reproductive system | 9.82e-11 | 26 |
gonad | 3.44e-10 | 18 |
gonad primordium | 3.44e-10 | 18 |
body cavity precursor | 2.13e-07 | 38 |
anatomical cavity | 3.27e-07 | 39 |
duct | 5.00e-07 | 7 |