FFCP PHASE1:Mm9::chr13:41111644..41111678,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:41111644..41111678,+
|short_description=p1@Tmem14c
|description=CAGE_peak_1_at_Tmem14c_5end
|association_with_transcript=25bp_to_ENSMUST00000021790,NM_025...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=66154 | |EntrezGene=66154 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2021 | |||
|TSSclassifier=NA | |||
|UniProt=Q9CQN6,Q8C297 | |UniProt=Q9CQN6,Q8C297 | ||
|association_with_transcript=25bp_to_ENSMUST00000021790,NM_025387,uc007qet.2,uc007qeu.2_5end | |||
|cluster_id=chr13:41111644..41111678,+ | |||
|description=CAGE_peak_1_at_Tmem14c_5end | |||
|id=chr13:41111644..41111678,+ | |||
|ontology_enrichment_celltype=CL:0000063!9.92e-10!66;CL:0000219!5.64e-09!54;CL:0000049!6.12e-08!19;CL:0002320!3.17e-07!46;CL:0000134!3.17e-07!46;CL:0000763!6.72e-07!16;CL:0002371!8.45e-07!118 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,5.64e-09,54;CL:0000049,6.12e-08,19;CL:0002320,3.17e-07,46;CL:0000134,3.17e-07,46;CL:0000763,6.72e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009854!1.01e-10!23;UBERON:0009856!1.01e-10!23;UBERON:0002107!2.39e-10!22;UBERON:0007499!2.39e-10!22;UBERON:0006925!2.39e-10!22;UBERON:0009497!2.39e-10!22;UBERON:0000015!2.39e-10!22;UBERON:0002423!2.39e-10!22;UBERON:0006235!2.39e-10!22;UBERON:0008835!2.39e-10!22;UBERON:0003894!2.39e-10!22;UBERON:0004161!2.39e-10!22;UBERON:0008836!2.39e-10!22;UBERON:0002365!3.27e-09!25;UBERON:0002330!3.27e-09!25;UBERON:0004923!5.01e-09!24;UBERON:0003914!8.64e-09!47;UBERON:0002204!3.12e-08!32;UBERON:0002405!4.21e-08!70;UBERON:0001474!1.23e-07!22;UBERON:0004765!1.23e-07!22;UBERON:0001434!1.23e-07!22;UBERON:0005172!2.38e-07!49;UBERON:0005173!2.38e-07!49;UBERON:0002417!2.38e-07!49;UBERON:0000916!2.38e-07!49;UBERON:0005256!2.83e-07!47;UBERON:0002371!3.10e-07!16;UBERON:0002384!3.17e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,1.01e-10,23;UBERON:0009856,1.01e-10,23;UBERON:0002107,2.39e-10,22;UBERON:0007499,2.39e-10,22;UBERON:0006925,2.39e-10,22;UBERON:0009497,2.39e-10,22;UBERON:0000015,2.39e-10,22;UBERON:0002423,2.39e-10,22;UBERON:0006235,2.39e-10,22;UBERON:0008835,2.39e-10,22;UBERON:0003894,2.39e-10,22;UBERON:0004161,2.39e-10,22;UBERON:0008836,2.39e-10,22;UBERON:0002365,3.27e-09,25;UBERON:0002330,3.27e-09,25;UBERON:0004923,5.01e-09,24;UBERON:0003914,8.64e-09,47;UBERON:0002204,3.12e-08,32;UBERON:0001474,1.23e-07,22;UBERON:0004765,1.23e-07,22;UBERON:0001434,1.23e-07,22;UBERON:0005409,1.88e-07,47;UBERON:0005172,2.38e-07,49;UBERON:0005173,2.38e-07,49;UBERON:0002417,2.38e-07,49;UBERON:0000916,2.38e-07,49;UBERON:0005256,2.97e-07,45;UBERON:0002371,3.10e-07,16;UBERON:0002384,3.17e-07,46 | |||
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| ||
|short_description=p1@Tmem14c | |||
}} | }} |
Latest revision as of 14:27, 1 October 2015
Short description: | p1@Tmem14c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tmem14c_5end |
Coexpression cluster: | MCL_coexpression_mm9:2021 |
Association with transcript: | 25bp_to_ENSMUST00000021790, NM_025387, uc007qet.2, uc007qeu.2_5end |
EntrezGene: | Tmem14c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 5.64e-09 | 54 |
common myeloid progenitor | 6.12e-08 | 19 |
connective tissue cell | 3.17e-07 | 46 |
mesenchymal cell | 3.17e-07 | 46 |
myeloid cell | 6.72e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
digestive tract diverticulum | 1.01e-10 | 23 |
sac | 1.01e-10 | 23 |
liver | 2.39e-10 | 22 |
epithelial sac | 2.39e-10 | 22 |
digestive gland | 2.39e-10 | 22 |
epithelium of foregut-midgut junction | 2.39e-10 | 22 |
anatomical boundary | 2.39e-10 | 22 |
hepatobiliary system | 2.39e-10 | 22 |
foregut-midgut junction | 2.39e-10 | 22 |
hepatic diverticulum | 2.39e-10 | 22 |
liver primordium | 2.39e-10 | 22 |
septum transversum | 2.39e-10 | 22 |
liver bud | 2.39e-10 | 22 |
exocrine gland | 3.27e-09 | 25 |
exocrine system | 3.27e-09 | 25 |
organ component layer | 5.01e-09 | 24 |
epithelial tube | 8.64e-09 | 47 |
musculoskeletal system | 3.12e-08 | 32 |
bone element | 1.23e-07 | 22 |
skeletal element | 1.23e-07 | 22 |
skeletal system | 1.23e-07 | 22 |
gastrointestinal system | 1.88e-07 | 47 |
abdomen element | 2.38e-07 | 49 |
abdominal segment element | 2.38e-07 | 49 |
abdominal segment of trunk | 2.38e-07 | 49 |
abdomen | 2.38e-07 | 49 |
trunk mesenchyme | 2.97e-07 | 45 |
bone marrow | 3.10e-07 | 16 |
connective tissue | 3.17e-07 | 46 |