FFCP PHASE1:Mm9::chr12:47799607..47799610,-: Difference between revisions
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|id=chr12:47799607..47799610,-
|short_description=p@chr12:47799607..47799610,-
|description=CAGE_peak_at_chr12:47799607..47799610,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=87 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:47799607..47799610,- | |||
|description=CAGE_peak_at_chr12:47799607..47799610,- | |||
|id=chr12:47799607..47799610,- | |||
|ontology_enrichment_celltype=CL:0000117!3.57e-23!23;CL:0000337!3.57e-23!23;CL:0000540!3.29e-14!33;CL:0000047!3.29e-14!33;CL:0000031!3.29e-14!33;CL:0000404!3.29e-14!33;CL:0000393!4.37e-11!39;CL:0000211!4.37e-11!39;CL:0002319!1.65e-09!43;CL:0000221!3.67e-09!44;CL:0000133!3.67e-09!44;CL:0000055!2.17e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.14e-24,23;CL:0000337,5.14e-24,23;CL:0000540,1.18e-16,33;CL:0000047,1.18e-16,33;CL:0000031,1.18e-16,33;CL:0000404,1.18e-16,33;CL:0000393,4.83e-14,39;CL:0000211,4.83e-14,39;CL:0000120,6.33e-13,3;CL:0002612,6.33e-13,3;CL:0002319,1.06e-12,43;CL:0000221,2.10e-12,44;CL:0000133,2.10e-12,44;CL:0002321,1.25e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.42e-14!73;UBERON:0005743!3.42e-14!73;UBERON:0001049!3.81e-14!52;UBERON:0005068!3.81e-14!52;UBERON:0006241!3.81e-14!52;UBERON:0007135!3.81e-14!52;UBERON:0000073!1.49e-13!75;UBERON:0001016!1.49e-13!75;UBERON:0002616!4.70e-11!49;UBERON:0004121!5.13e-11!102;UBERON:0000924!5.13e-11!102;UBERON:0006601!5.13e-11!102;UBERON:0002346!1.06e-10!71;UBERON:0003075!1.06e-10!71;UBERON:0007284!1.06e-10!71;UBERON:0000955!1.07e-10!50;UBERON:0006238!1.07e-10!50;UBERON:0000033!2.07e-10!63;UBERON:0002020!2.87e-10!34;UBERON:0002240!5.39e-10!6;UBERON:0005174!5.39e-10!6;UBERON:0001137!5.39e-10!6;UBERON:0003076!1.01e-09!12;UBERON:0003057!1.01e-09!12;UBERON:0002298!3.09e-09!6;UBERON:0001948!1.03e-08!5;UBERON:0002315!1.03e-08!5;UBERON:0003056!3.29e-07!49;UBERON:0003080!3.48e-07!40;UBERON:0007811!7.85e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,1.36e-16,5;UBERON:0002315,1.36e-16,5;UBERON:0002240,6.10e-14,6;UBERON:0005174,6.10e-14,6;UBERON:0001137,6.10e-14,6;UBERON:0002257,6.33e-13,3;UBERON:0002020,1.97e-12,34;UBERON:0001017,1.42e-11,73;UBERON:0001016,2.99e-11,75;UBERON:0000073,5.42e-10,54;UBERON:0004121,9.21e-09,95;UBERON:0000924,9.21e-09,95;UBERON:0006601,9.21e-09,95;UBERON:0001049,5.07e-08,52;UBERON:0005068,5.07e-08,52;UBERON:0006241,5.07e-08,52;UBERON:0007135,5.07e-08,52;UBERON:0003076,2.88e-07,12;UBERON:0003057,2.88e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,2.11596391708813,1.26766280701236,0,0,0,0,0,0,0,0.207379224616955,0.270011876663381,0,1.14260393761521,0.883474163806454,0.244981598429908,0.287536413054709,0,1.10115880999389,0.510749352340751,0.307213066512487,0.659431438650969,1.37231465403614,0,0.279182999001381,1.12552522006336,0.45839474333043,1.47314292736834,0.711858403995515,1.67759501242771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0.898743836428936,0,0,0,0.255715457330331,0.41557608911912,0,0,0,0,0,0,0,0,0.150704817835715,0.204109497453984,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0.119372344003136,0,0,0.556275906031529,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,1.12950368523413,0,0,0,2.05524755931193,0,0,0,0.453142408984205,0,0.103787347584177,0,0.170733605754134,0,0.838452650511929,0,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.128050304809739,0,0.476293691283074,0,0,0,0.147198920134397,0.342869252385415,0,0,0,0,0.25384382367503,0,0,0,0.561142271657738,0.118635018124174,0,0,0,0,0.249810577937946,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,2.11596391708813,1.26766280701236,0,0,0,0,0,0,0,0.207379224616955,0.270011876663381,0,1.14260393761521,0.883474163806454,0.244981598429908,0.287536413054709,0,1.10115880999389,0.510749352340751,0.307213066512487,0.659431438650969,1.37231465403614,0,0.279182999001381,1.12552522006336,0.45839474333043,1.47314292736834,0.711858403995515,1.67759501242771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0.898743836428936,0,0,0,0.255715457330331,0.41557608911912,0,0,0,0,0,0,0,0,0.150704817835715,0.204109497453984,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0.119372344003136,0,0,0.556275906031529,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,1.12950368523413,0,0,0,2.05524755931193,0,0,0,0.453142408984205,0,0.103787347584177,0,0.170733605754134,0,0.838452650511929,0,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.128050304809739,0,0.476293691283074,0,0,0,0.147198920134397,0.342869252385415,0,0,0,0,0.25384382367503,0,0,0,0.561142271657738,0.118635018124174,0,0,0,0,0.249810577937946,0,0,0,0,0 | ||
|short_description=p@chr12:47799607..47799610,- | |||
}} | }} |
Latest revision as of 01:42, 5 August 2015
Short description: | p@chr12:47799607..47799610, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:47799607..47799610, - |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.14e-24 | 23 |
neuroblast (sensu Vertebrata) | 5.14e-24 | 23 |
neuron | 1.18e-16 | 33 |
neuronal stem cell | 1.18e-16 | 33 |
neuroblast | 1.18e-16 | 33 |
electrically signaling cell | 1.18e-16 | 33 |
electrically responsive cell | 4.83e-14 | 39 |
electrically active cell | 4.83e-14 | 39 |
granule cell | 6.33e-13 | 3 |
neuron of the ventral spinal cord | 6.33e-13 | 3 |
neural cell | 1.06e-12 | 43 |
ectodermal cell | 2.10e-12 | 44 |
neurectodermal cell | 2.10e-12 | 44 |
embryonic cell | 1.25e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
regional part of spinal cord | 1.36e-16 | 5 |
gray matter of spinal cord | 1.36e-16 | 5 |
spinal cord | 6.10e-14 | 6 |
dorsal region element | 6.10e-14 | 6 |
dorsum | 6.10e-14 | 6 |
ventral horn of spinal cord | 6.33e-13 | 3 |
gray matter | 1.97e-12 | 34 |
central nervous system | 1.42e-11 | 73 |
nervous system | 2.99e-11 | 75 |
regional part of nervous system | 5.42e-10 | 54 |
ectoderm-derived structure | 9.21e-09 | 95 |
ectoderm | 9.21e-09 | 95 |
presumptive ectoderm | 9.21e-09 | 95 |
neural tube | 5.07e-08 | 52 |
neural rod | 5.07e-08 | 52 |
future spinal cord | 5.07e-08 | 52 |
neural keel | 5.07e-08 | 52 |
posterior neural tube | 2.88e-07 | 12 |
chordal neural plate | 2.88e-07 | 12 |