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FFCP PHASE1:Mm9::chr12:45429836..45429850,+: Difference between revisions

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(Created page with "{{FFCP |id=chr12:45429836..45429850,+ |short_description=p3@Nrcam |description=CAGE_peak_3_at_Nrcam_5end |association_with_transcript=-21bp_to_ENSMUST00000020939,ENSMUST00...")
 
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{{FFCP
{{FFCP
|id=chr12:45429836..45429850,+
|DHSsupport=NA
|short_description=p3@Nrcam
|DPIdataset=NA
|description=CAGE_peak_3_at_Nrcam_5end
|association_with_transcript=-21bp_to_ENSMUST00000020939,ENSMUST00000110748,ENSMUST00000110751,ENSMUST00000167410,NM_001146031,NM_176930,uc007nls.2,uc007nlt.2,uc007nlu.2,uc007nlv.2_5end
|EntrezGene=319504
|EntrezGene=319504
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=Q810U4,Q6QRP1
|UniProt=Q810U4,Q6QRP1
|association_with_transcript=-21bp_to_ENSMUST00000020939,ENSMUST00000110748,ENSMUST00000110751,ENSMUST00000167410,NM_001146031,NM_176930,uc007nls.2,uc007nlt.2,uc007nlu.2,uc007nlv.2_5end
|cluster_id=chr12:45429836..45429850,+
|description=CAGE_peak_3_at_Nrcam_5end
|id=chr12:45429836..45429850,+
|ontology_enrichment_celltype=CL:0000221!1.33e-17!44;CL:0000133!1.33e-17!44;CL:0002319!6.54e-17!43;CL:0000540!1.82e-14!33;CL:0000047!1.82e-14!33;CL:0000031!1.82e-14!33;CL:0000404!1.82e-14!33;CL:0000117!7.04e-13!23;CL:0000337!7.04e-13!23;CL:0000055!2.58e-12!50;CL:0000393!2.58e-10!39;CL:0000211!2.58e-10!39
|ontology_enrichment_celltype_v019_2=CL:0000221,6.66e-20,44;CL:0000133,6.66e-20,44;CL:0002319,7.59e-19,43;CL:0000117,3.75e-18,23;CL:0000337,3.75e-18,23;CL:0000540,5.37e-17,33;CL:0000047,5.37e-17,33;CL:0000031,5.37e-17,33;CL:0000404,5.37e-17,33;CL:0000393,2.64e-13,39;CL:0000211,2.64e-13,39;CL:0002321,2.52e-09,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.12e-39!75;UBERON:0001016!2.12e-39!75;UBERON:0001017!2.13e-37!73;UBERON:0005743!2.13e-37!73;UBERON:0004121!3.01e-35!102;UBERON:0000924!3.01e-35!102;UBERON:0006601!3.01e-35!102;UBERON:0001049!2.50e-30!52;UBERON:0005068!2.50e-30!52;UBERON:0006241!2.50e-30!52;UBERON:0007135!2.50e-30!52;UBERON:0000033!5.58e-29!63;UBERON:0000955!6.41e-28!50;UBERON:0006238!6.41e-28!50;UBERON:0002616!5.07e-27!49;UBERON:0002346!9.67e-27!71;UBERON:0003075!9.67e-27!71;UBERON:0007284!9.67e-27!71;UBERON:0003056!1.95e-26!49;UBERON:0003080!2.12e-25!40;UBERON:0002780!5.88e-25!39;UBERON:0001890!5.88e-25!39;UBERON:0006240!5.88e-25!39;UBERON:0002020!3.54e-23!34;UBERON:0002791!2.16e-20!29;UBERON:0003528!2.16e-20!29;UBERON:0001893!2.16e-20!29;UBERON:0007811!8.54e-17!86;UBERON:0000956!1.46e-15!21;UBERON:0001869!1.46e-15!21;UBERON:0000203!1.46e-15!21;UBERON:0000153!7.38e-14!94;UBERON:0002619!1.34e-12!17;UBERON:0002021!1.65e-09!10;UBERON:0000411!1.65e-09!10;UBERON:0001950!1.65e-09!10;UBERON:0000025!1.23e-07!114;UBERON:0004111!5.01e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.22e-50,75;UBERON:0001017,5.87e-47,73;UBERON:0004121,1.78e-39,95;UBERON:0000924,1.78e-39,95;UBERON:0006601,1.78e-39,95;UBERON:0000073,8.60e-39,54;UBERON:0001049,1.83e-38,52;UBERON:0005068,1.83e-38,52;UBERON:0006241,1.83e-38,52;UBERON:0007135,1.83e-38,52;UBERON:0000955,1.35e-35,47;UBERON:0006238,1.35e-35,47;UBERON:0002616,3.78e-34,46;UBERON:0003080,1.44e-32,40;UBERON:0002020,7.17e-32,34;UBERON:0002780,8.53e-32,39;UBERON:0001890,8.53e-32,39;UBERON:0006240,8.53e-32,39;UBERON:0002346,2.39e-30,64;UBERON:0003075,2.39e-30,64;UBERON:0007284,2.39e-30,64;UBERON:0003528,6.68e-29,29;UBERON:0002791,6.68e-29,29;UBERON:0001893,6.68e-29,29;UBERON:0010371,3.78e-28,73;UBERON:0003056,3.50e-26,49;UBERON:0000956,1.31e-20,21;UBERON:0001869,1.31e-20,21;UBERON:0000203,1.31e-20,21;UBERON:0010314,1.37e-19,92;UBERON:0002619,1.18e-15,17;UBERON:0002021,2.98e-15,10;UBERON:0000411,2.98e-15,10;UBERON:0001950,2.98e-15,10;UBERON:0004111,2.07e-12,122;UBERON:0000025,2.48e-12,114;UBERON:0011216,7.62e-12,194;UBERON:0002420,2.81e-09,8;UBERON:0007245,2.81e-09,8;UBERON:0010009,2.81e-09,8;UBERON:0010011,2.81e-09,8;UBERON:0000454,2.81e-09,8;UBERON:0000369,7.86e-07,5;UBERON:0002435,7.86e-07,5;UBERON:0000204,7.86e-07,5;UBERON:0010082,7.86e-07,5
|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.439372365468944,0.58328969722285,1.81982348112971,0,0,0,0,0,0,0,3.03474691289397,2.64495489636016,2.53532561402472,0,0.889294796111139,0.449949858640699,0,0,2.09720077362883,2.30530983192933,5.91030790158323,3.51015439662396,5.67877395648731,0.856952953211411,1.32521124570968,2.81728838194394,2.01275489138296,0.919218786610021,0,1.91531007127782,2.15049146558741,1.45074916503213,2.19570344645783,2.08365348222704,1.11673199600552,1.12552522006336,2.75036845998258,6.48182888042069,2.70506193518296,1.1183966749518,10.9045718399785,8.08615693142605,0,0,0,0,0,0,0,0,0,0,3.09855523508697,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0.301445281105245,0.352766121407114,0,0.247194967734374,0,0,0,0,0,0,1.17112318804619,1.04723353406728,0,0,0,0,1.04853447583376,6.40500843946077,4.90051973240171,6.08385120672968,7.41574826257959,1.0389402227978,3.0825839982874,0,0,0,0,0.650602214813519,0.919608417733892,0.360124259610698,1.20563854268572,0.612328492361951,0.512454881139399,0.562210347358373,0.776110112217047,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.20130799400096,5.45394445610208,0,0,0.426576501070468,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.210407459670956,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.977789858652155,0.509235257325564,0.469380496577004,1.84256883185997,0.714130922658041,0.390267295715598,1.10344600874334,0.44292937929755,0.956728611944923,0,0.518054945597687,0,0,0,0,0,1.76605648986571,1.87538698547525,0,0,0,0,0.215423397732799,2.15071918157297,2.00518806674155,4.81230102341015,0.809621403349789,0.876767573733936,0.790575555893047,7.71171159412337,0,0,0.325773918707152,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,1.36175842301515,1.8006109403131,1.4229455216103,1.07168517515796,0.886701168211368,1.42695054081656,0.822745103010605,0.608929898229199,0.704015124191131,0.21183207086382,0,0.65954501176592,0,0,0.238744688006273,0.164140899745061,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0,0,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0.314578033277133,0,0,0,0.202725215290164,0.410843828659309,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,12.9892923801925,7.36520378411483,9.73922372846974,8.93636548187176,6.85082519770642,7.55393897389701,12.1504050041725,6.30449684513909,4.98456649882625,6.73088405277366,0.207574695168353,1.59609949360412,0.512200817262403,0.729320151204882,0.419226325255965,0,0.222246727801615,0.412070114477788,0.320919209591815,1.01078884705519,0.25347929989024,0.377252682772152,0.842773567228942,1.02440243847791,0.746661096422973,0.476293691283074,0.579421629724277,0.38581844092741,1.23625770240992,1.03039244094078,1.71434626192708,0.532427418478012,0.715308569841963,0.581385666529314,0.658765662907314,0.423073039458382,0.182927972872773,1.31534855718921,0.679020569229309,0.561142271657738,0.355905054372522,0.689531376628944,0.409231043169689,0.619747364743864,0.385813221962283,2.49810577937946,0.701794825336225,0.429742108096597,0.382576664137687,0,0
|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.439372365468944,0.58328969722285,1.81982348112971,0,0,0,0,0,0,0,3.03474691289397,2.64495489636016,2.53532561402472,0,0.889294796111139,0.449949858640699,0,0,2.09720077362883,2.30530983192933,5.91030790158323,3.51015439662396,5.67877395648731,0.856952953211411,1.32521124570968,2.81728838194394,2.01275489138296,0.919218786610021,0,1.91531007127782,2.15049146558741,1.45074916503213,2.19570344645783,2.08365348222704,1.11673199600552,1.12552522006336,2.75036845998258,6.48182888042069,2.70506193518296,1.1183966749518,10.9045718399785,8.08615693142605,0,0,0,0,0,0,0,0,0,0,3.09855523508697,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0.301445281105245,0.352766121407114,0,0.247194967734374,0,0,0,0,0,0,1.17112318804619,1.04723353406728,0,0,0,0,1.04853447583376,6.40500843946077,4.90051973240171,6.08385120672968,7.41574826257959,1.0389402227978,3.0825839982874,0,0,0,0,0.650602214813519,0.919608417733892,0.360124259610698,1.20563854268572,0.612328492361951,0.512454881139399,0.562210347358373,0.776110112217047,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.20130799400096,5.45394445610208,0,0,0.426576501070468,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.210407459670956,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.977789858652155,0.509235257325564,0.469380496577004,1.84256883185997,0.714130922658041,0.390267295715598,1.10344600874334,0.44292937929755,0.956728611944923,0,0.518054945597687,0,0,0,0,0,1.76605648986571,1.87538698547525,0,0,0,0,0.215423397732799,2.15071918157297,2.00518806674155,4.81230102341015,0.809621403349789,0.876767573733936,0.790575555893047,7.71171159412337,0,0,0.325773918707152,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,1.36175842301515,1.8006109403131,1.4229455216103,1.07168517515796,0.886701168211368,1.42695054081656,0.822745103010605,0.608929898229199,0.704015124191131,0.21183207086382,0,0.65954501176592,0,0,0.238744688006273,0.164140899745061,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0,0,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0.314578033277133,0,0,0,0.202725215290164,0.410843828659309,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,12.9892923801925,7.36520378411483,9.73922372846974,8.93636548187176,6.85082519770642,7.55393897389701,12.1504050041725,6.30449684513909,4.98456649882625,6.73088405277366,0.207574695168353,1.59609949360412,0.512200817262403,0.729320151204882,0.419226325255965,0,0.222246727801615,0.412070114477788,0.320919209591815,1.01078884705519,0.25347929989024,0.377252682772152,0.842773567228942,1.02440243847791,0.746661096422973,0.476293691283074,0.579421629724277,0.38581844092741,1.23625770240992,1.03039244094078,1.71434626192708,0.532427418478012,0.715308569841963,0.581385666529314,0.658765662907314,0.423073039458382,0.182927972872773,1.31534855718921,0.679020569229309,0.561142271657738,0.355905054372522,0.689531376628944,0.409231043169689,0.619747364743864,0.385813221962283,2.49810577937946,0.701794825336225,0.429742108096597,0.382576664137687,0,0
|short_description=p3@Nrcam
}}
}}

Latest revision as of 15:09, 26 September 2015

Short description:p3@Nrcam
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Nrcam_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: -21bp_to_ENSMUST00000020939, ENSMUST00000110748, ENSMUST00000110751, ENSMUST00000167410, NM_001146031, NM_176930, uc007nls.2, uc007nlt.2, uc007nlu.2, uc007nlv.2_5end
EntrezGene:Nrcam
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Nrcam

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.82
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.03
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.91
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.51
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.82
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.01
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.48
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D910.90
Mouse Schwann, donor2.CNhs12573.11746-123F98.09
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.10
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D86.41
corpus striatum, neonate N00.CNhs11226.630-43F14.90
cortex, adult.CNhs10473.12-14D56.08
cortex, neonate N30.CNhs11107.1392-42F27.42
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B23.08
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E88.20
hippocampus, neonate N00.CNhs11228.627-43G15.45
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.77
medulla oblongata, neonate N30.CNhs11200.1396-42A31.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.81
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I97.71
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.99
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.74
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.94
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.85
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.15
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.30
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.73
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell6.66e-2044
neurectodermal cell6.66e-2044
neural cell7.59e-1943
CNS neuron (sensu Vertebrata)3.75e-1823
neuroblast (sensu Vertebrata)3.75e-1823
neuron5.37e-1733
neuronal stem cell5.37e-1733
neuroblast5.37e-1733
electrically signaling cell5.37e-1733
electrically responsive cell2.64e-1339
electrically active cell2.64e-1339
embryonic cell2.52e-0970

Uber anatomy
Ontology termp-valuen
nervous system4.22e-5075
central nervous system5.87e-4773
ectoderm-derived structure1.78e-3995
ectoderm1.78e-3995
presumptive ectoderm1.78e-3995
regional part of nervous system8.60e-3954
neural tube1.83e-3852
neural rod1.83e-3852
future spinal cord1.83e-3852
neural keel1.83e-3852
brain1.35e-3547
future brain1.35e-3547
regional part of brain3.78e-3446
anterior neural tube1.44e-3240
gray matter7.17e-3234
regional part of forebrain8.53e-3239
forebrain8.53e-3239
future forebrain8.53e-3239
neurectoderm2.39e-3064
neural plate2.39e-3064
presumptive neural plate2.39e-3064
brain grey matter6.68e-2929
regional part of telencephalon6.68e-2929
telencephalon6.68e-2929
ecto-epithelium3.78e-2873
pre-chordal neural plate3.50e-2649
cerebral cortex1.31e-2021
cerebral hemisphere1.31e-2021
pallium1.31e-2021
structure with developmental contribution from neural crest1.37e-1992
regional part of cerebral cortex1.18e-1517
occipital lobe2.98e-1510
visual cortex2.98e-1510
neocortex2.98e-1510
anatomical conduit2.07e-12122
tube2.48e-12114
organ system subdivision7.62e-12194
basal ganglion2.81e-098
nuclear complex of neuraxis2.81e-098
aggregate regional part of brain2.81e-098
collection of basal ganglia2.81e-098
cerebral subcortex2.81e-098
corpus striatum7.86e-075
striatum7.86e-075
ventral part of telencephalon7.86e-075
future corpus striatum7.86e-075
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