FFCP PHASE1:Mm9::chr12:118389736..118389749,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:118389736..118389749,-
|short_description=p1@Gm10421
|description=CAGE_peak_1_at_Gm10421_5end
|association_with_transcript=0bp_to_NR_033538,uc007phz.2_5en...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=100038689 | |EntrezGene=100038689 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_NR_033538,uc007phz.2_5end | |||
|cluster_id=chr12:118389736..118389749,- | |||
|description=CAGE_peak_1_at_Gm10421_5end | |||
|id=chr12:118389736..118389749,- | |||
|ontology_enrichment_celltype=CL:0000117!2.45e-07!23;CL:0000337!2.45e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002608,3.78e-13,3;CL:0000117,1.33e-12,23;CL:0000337,1.33e-12,23;CL:0002613,3.02e-12,3;CL:0000120,4.29e-12,3;CL:0000540,2.31e-08,33;CL:0000047,2.31e-08,33;CL:0000031,2.31e-08,33;CL:0000404,2.31e-08,33;CL:0000393,7.29e-07,39;CL:0000211,7.29e-07,39;CL:0002609,8.76e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!1.48e-15!49;UBERON:0000033!2.42e-14!63;UBERON:0002616!1.39e-13!49;UBERON:0000955!4.04e-13!50;UBERON:0006238!4.04e-13!50;UBERON:0003080!1.23e-12!40;UBERON:0001017!1.35e-12!73;UBERON:0005743!1.35e-12!73;UBERON:0001049!3.68e-12!52;UBERON:0005068!3.68e-12!52;UBERON:0006241!3.68e-12!52;UBERON:0007135!3.68e-12!52;UBERON:0002346!4.07e-12!71;UBERON:0003075!4.07e-12!71;UBERON:0007284!4.07e-12!71;UBERON:0000073!5.99e-12!75;UBERON:0001016!5.99e-12!75;UBERON:0002780!9.56e-12!39;UBERON:0001890!9.56e-12!39;UBERON:0006240!9.56e-12!39;UBERON:0004121!1.67e-10!102;UBERON:0000924!1.67e-10!102;UBERON:0006601!1.67e-10!102;UBERON:0007811!9.92e-09!86;UBERON:0002791!5.03e-08!29;UBERON:0003528!5.03e-08!29;UBERON:0001893!5.03e-08!29;UBERON:0002048!5.32e-08!14;UBERON:0000117!5.32e-08!14;UBERON:0000171!5.32e-08!14;UBERON:0000170!5.32e-08!14;UBERON:0005597!5.32e-08!14;UBERON:0000118!5.32e-08!14;UBERON:0002420!1.98e-07!8;UBERON:0007245!1.98e-07!8;UBERON:0010009!1.98e-07!8;UBERON:0010011!1.98e-07!8;UBERON:0000454!1.98e-07!8;UBERON:0000369!2.80e-07!5;UBERON:0002435!2.80e-07!5;UBERON:0000204!2.80e-07!5;UBERON:0010082!2.80e-07!5;UBERON:0000153!4.23e-07!94;UBERON:0002020!6.39e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,5.27e-20,5;UBERON:0002435,5.27e-20,5;UBERON:0000204,5.27e-20,5;UBERON:0010082,5.27e-20,5;UBERON:0003080,1.35e-14,40;UBERON:0003056,2.12e-13,49;UBERON:0002780,1.09e-12,39;UBERON:0001890,1.09e-12,39;UBERON:0006240,1.09e-12,39;UBERON:0002420,1.95e-12,8;UBERON:0007245,1.95e-12,8;UBERON:0010009,1.95e-12,8;UBERON:0010011,1.95e-12,8;UBERON:0000454,1.95e-12,8;UBERON:0002616,2.18e-12,46;UBERON:0000955,4.50e-12,47;UBERON:0006238,4.50e-12,47;UBERON:0001017,4.63e-11,73;UBERON:0001016,1.09e-10,75;UBERON:0001049,1.10e-10,52;UBERON:0005068,1.10e-10,52;UBERON:0006241,1.10e-10,52;UBERON:0007135,1.10e-10,52;UBERON:0000073,3.34e-10,54;UBERON:0003528,6.71e-10,29;UBERON:0002791,6.71e-10,29;UBERON:0001893,6.71e-10,29;UBERON:0002346,1.16e-09,64;UBERON:0003075,1.16e-09,64;UBERON:0007284,1.16e-09,64;UBERON:0004121,5.34e-09,95;UBERON:0000924,5.34e-09,95;UBERON:0006601,5.34e-09,95;UBERON:0002020,3.09e-08,34;UBERON:0010371,3.74e-08,73;UBERON:0000025,4.38e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0,0.194429899074283,0.419959264876088,0,0,0,0,0,0,0,2.22548106945558,1.5869729378161,1.26766280701236,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0,0.220868540951614,2.69479758272899,3.73797336971122,1.83843757322004,0,0.510749352340751,0.153606533256243,2.37395317914349,1.37231465403614,1.56274011167028,0.279182999001381,0,0.763991238884051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79748767285787,2.28750301409313,4.27224797183739,0.173824320192276,0.255715457330331,1.0389402227978,0.973447578406546,0,0,0,0,1.30120442962704,0.919608417733892,0.720248519221397,0.90422890701429,0.204109497453984,0,0.281105173679186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0.502518772325447,3.57065461329021,1.75620283072019,1.7339865851681,0.664394068946325,1.59454768657487,0.655453258862952,0.345369963731791,0.578596234326046,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.70091641046965,1.81102157295856,0.857348140126369,0,0.178368817602071,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0.515559547031063,0,0.755393897389701,1.35004500046361,0,0.453142408984205,0.51776031175182,0.31136204275253,1.19707462020309,0.853668028770671,0,0.419226325255965,0,0.666740183404846,0.412070114477788,0.320919209591815,1.01078884705519,0.760437899670719,0,0.468207537349412,0.0640251524048693,0.402048282689293,0.476293691283074,0.115884325944855,0,0,0.147198920134397,0.685738504770831,0,0,0.145346416632329,0.0941093804153306,0,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0,0.194429899074283,0.419959264876088,0,0,0,0,0,0,0,2.22548106945558,1.5869729378161,1.26766280701236,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0,0.220868540951614,2.69479758272899,3.73797336971122,1.83843757322004,0,0.510749352340751,0.153606533256243,2.37395317914349,1.37231465403614,1.56274011167028,0.279182999001381,0,0.763991238884051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79748767285787,2.28750301409313,4.27224797183739,0.173824320192276,0.255715457330331,1.0389402227978,0.973447578406546,0,0,0,0,1.30120442962704,0.919608417733892,0.720248519221397,0.90422890701429,0.204109497453984,0,0.281105173679186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0.502518772325447,3.57065461329021,1.75620283072019,1.7339865851681,0.664394068946325,1.59454768657487,0.655453258862952,0.345369963731791,0.578596234326046,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.70091641046965,1.81102157295856,0.857348140126369,0,0.178368817602071,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0.515559547031063,0,0.755393897389701,1.35004500046361,0,0.453142408984205,0.51776031175182,0.31136204275253,1.19707462020309,0.853668028770671,0,0.419226325255965,0,0.666740183404846,0.412070114477788,0.320919209591815,1.01078884705519,0.760437899670719,0,0.468207537349412,0.0640251524048693,0.402048282689293,0.476293691283074,0.115884325944855,0,0,0.147198920134397,0.685738504770831,0,0,0.145346416632329,0.0941093804153306,0,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0,0,0,0 | ||
|short_description=p1@Gm10421 | |||
}} | }} |
Latest revision as of 10:40, 26 September 2015
Short description: | p1@Gm10421 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm10421_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NR_033538, uc007phz.2_5end |
EntrezGene: | Gm10421 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hippocampal neuron | 3.78e-13 | 3 |
CNS neuron (sensu Vertebrata) | 1.33e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.33e-12 | 23 |
striatum neuron | 3.02e-12 | 3 |
granule cell | 4.29e-12 | 3 |
neuron | 2.31e-08 | 33 |
neuronal stem cell | 2.31e-08 | 33 |
neuroblast | 2.31e-08 | 33 |
electrically signaling cell | 2.31e-08 | 33 |
electrically responsive cell | 7.29e-07 | 39 |
electrically active cell | 7.29e-07 | 39 |
neuron of cerebral cortex | 8.76e-07 | 6 |