FFCP PHASE1:Mm9::chr11:58746758..58746797,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:58746758..58746797,-
|short_description=p@chr11:58746758..58746797,-
|description=CAGE_peak_at_chr11:58746758..58746797,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=42 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:58746758..58746797,- | |||
|description=CAGE_peak_at_chr11:58746758..58746797,- | |||
|id=chr11:58746758..58746797,- | |||
|ontology_enrichment_celltype=CL:0000055!8.34e-11!50;CL:0002319!2.12e-10!43;CL:0000221!2.85e-10!44;CL:0000133!2.85e-10!44;CL:0000393!2.88e-10!39;CL:0000211!2.88e-10!39;CL:0000117!2.86e-09!23;CL:0000337!2.86e-09!23;CL:0000540!3.17e-09!33;CL:0000047!3.17e-09!33;CL:0000031!3.17e-09!33;CL:0000404!3.17e-09!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.50e-13,23;CL:0000337,6.50e-13,23;CL:0002319,9.10e-13,43;CL:0000221,2.19e-12,44;CL:0000133,2.19e-12,44;CL:0000393,3.12e-12,39;CL:0000211,3.12e-12,39;CL:0000540,1.86e-11,33;CL:0000047,1.86e-11,33;CL:0000031,1.86e-11,33;CL:0000404,1.86e-11,33;CL:0002321,1.51e-10,70;CL:0002614,1.81e-08,3;CL:0002613,4.37e-07,3;CL:0000723,4.41e-07,91;CL:0000048,4.41e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.84e-10!73;UBERON:0005743!1.84e-10!73;UBERON:0000073!3.59e-10!75;UBERON:0001016!3.59e-10!75;UBERON:0002020!3.02e-08!34;UBERON:0001049!7.99e-07!52;UBERON:0005068!7.99e-07!52;UBERON:0006241!7.99e-07!52;UBERON:0007135!7.99e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002420,2.90e-10,8;UBERON:0007245,2.90e-10,8;UBERON:0010009,2.90e-10,8;UBERON:0010011,2.90e-10,8;UBERON:0000454,2.90e-10,8;UBERON:0001948,1.03e-08,5;UBERON:0002315,1.03e-08,5;UBERON:0002038,1.81e-08,3;UBERON:0009663,1.81e-08,3;UBERON:0009661,1.81e-08,3;UBERON:0000125,1.81e-08,3;UBERON:0002308,1.81e-08,3;UBERON:0002240,3.02e-07,6;UBERON:0005174,3.02e-07,6;UBERON:0001137,3.02e-07,6;UBERON:0001017,5.88e-07,73 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0.129123323441576,0,0.234064526321993,0,0.319088635981346,0.342401459862411,0.0874204024189974,0,0.404950534779652,0.699561878128147,0.315462165358238,0.411343300817216,0,0.680346321208558,0.198581902401771,0.261199789138935,0.159992422793407,0.22940928106717,0,0,0,0.190023419456374,0.252030129759931,0,2.54012269383853,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0.7813353445238,0,0,0,0.485510353031154,1.25896817975577,1.01376931219515,0.550640256485045,0.782391344348039,0.218025156380447,0,0.777719596297134,0.55994568650145,1.43752564364972,0.167782606057736,0,0.336093799142464,0.257259436035947,0.286533439938757,0.515672092277442,0.809265843438391,0.528990979272033,1.26766280701236,1.0165335962074,0,0,1.97773272513395,0.7104801149461,1.49800055259202,2.30530983192933,0.725827286159344,0.810035629990144,0,1.71390590642282,2.20868540951614,0.61245399607477,0.958454710182364,0.919218786610021,1.10115880999389,0.383062014255563,0.153606533256243,1.31886287730194,1.00636407962651,1.04182674111352,1.3959149950069,2.25105044012672,1.5279824777681,1.47314292736834,1.70846016958924,0.559198337475902,0.37863096666592,0.0755715601067855,0.869593466105033,0,0,0.539703191637817,0,0,0.280888840263504,0,0.259786004602869,0.35333957451034,0.281686839553361,0,0,0,1.08245520505607,0.506719730950197,1.51657333504435,0,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0.494389935468748,0,0,0.161766849947409,0,0.484875253135222,0,0,13.4045892360611,1.27728527604296,0.11981512450592,0,0.508280908292259,0.748953197024114,0.457500602818626,0.251308704225729,0.521472960576829,0.511430914660661,0,0.811206315338788,0.407357455401265,0.746441823660558,0,0.210441855886474,0.520481771850815,0.919608417733892,0.180062129805349,0.150704817835715,0.204109497453984,0.384341160854549,0.655912071918102,1.03481348295606,0,0,0.175951124163949,0.219195732427575,0.556094498451196,0.348252166522167,0.411564272815887,0,0,0,0,0.207125772535502,0.469052119962192,0.36012412292203,0,0.590292695242212,0.462801338662135,0.465067889500816,0.268273401399619,0.116765342367169,0.16455984991348,0,0,0.146199987425332,0,0,0.210289948564127,0.102904612379284,0.991256348951394,0.528901133327089,0.213288250535234,0.464473343720877,0.38660238396628,0,0,0.190225626112559,1.42358718463353,0.329397909448022,0,0.596869416123452,0,1.79763881730844,1.08069024937347,0,0.379335801906163,0.571242563048644,1.1270773567308,0.407302655690628,0.193952487167626,0.420814919341911,0.0632365371242573,0.147610147979602,0.156998727841375,0.246794327843601,0,0,0.196558995113203,0.449724224769707,0.811440485554012,0.482354319504834,0.25462585178142,0.287696137450811,2.91843408195064,0.549122826376163,0,0.744281895337007,0.312037673114561,0.505157755894224,0,1.4473305640901,0.184753190166605,0.189491411770485,0.325929952884052,0.169745085775188,0.469380496577004,0,0,0.195133647857799,0,0.44292937929755,0,0,0.518054945597687,0,0,0.54390568381871,0.491764273019036,0.275936746304732,0.321101179975584,0.586058432961016,0,0.504941854408746,0.631016438832513,0.780877488593277,0.430846795465598,0.955875191810208,1.33679204449436,0,0.404810701674894,1.16902343164525,0,0.321321316421807,0,0.712262414669021,0.651547837414304,0.494910368917606,1.32745138339963,0.728341908464944,0.302323556964751,0.188605079755898,0.590603785761546,0,0.516856586336442,0.363533729477506,0.356497378384721,0,0,0,0,0.540183282093931,0.258717367565509,0.214337035031592,0,0,0.164549020602121,0.608929898229199,0.23467170806371,0.21183207086382,0.220528398054962,0,0.161464426695906,0.120625849856312,0.238744688006273,0.164140899745061,0.291480836629851,0.370850604021019,0.683483523191411,0.412773735926445,0.555583582109135,0.376736914009382,0.956859594047176,1.14389086603261,0.339956859987711,0,0.138199973804424,0,0.316335993581135,0,0.324016022465404,0,0.218362563746178,0.269728692769641,0.165306911450672,0.26175594198403,0,0,1.12738587736838,0.149516546043979,0.165458490457098,0.388902376688095,0,0.844780627453891,0.117357238645754,0,0.943734099831398,0.724752362478018,0.288030006257865,0.632022241256357,0.202725215290164,0.308132871494482,0.25984164595559,0.716106782669926,0,0.721172697119813,0.295379054349154,0.302899349844443,0.228620419965,0.201652370273681,0.487289403698762,0,0.701261413089414,0,0.221985953374065,0.179427713218951,0,0,0,0.183151624267265,1.07184189539533,0.501572104035363,0.564751842617067,0.460325236507177,0,0.68741272937475,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,0.906284817968409,0.51776031175182,0.518936737920883,0.399024873401031,0.341467211508268,0.243106717068294,0.209613162627982,0.183843508450014,0.44449345560323,0,0,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0.229741875822453,0.476293691283074,0.115884325944855,0,0.412085900803307,0.147198920134397,0,0.354951612318675,0,0,0.0941093804153306,0,0,0,0.271608227691724,1.12228454331548,0,0,0.818462086339379,0.309873682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| ||
|short_description=p@chr11:58746758..58746797,- | |||
}} | }} |
Latest revision as of 04:25, 6 August 2015
Short description: | p@chr11:58746758..58746797, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:58746758..58746797, - |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.50e-13 | 23 |
neuroblast (sensu Vertebrata) | 6.50e-13 | 23 |
neural cell | 9.10e-13 | 43 |
ectodermal cell | 2.19e-12 | 44 |
neurectodermal cell | 2.19e-12 | 44 |
electrically responsive cell | 3.12e-12 | 39 |
electrically active cell | 3.12e-12 | 39 |
neuron | 1.86e-11 | 33 |
neuronal stem cell | 1.86e-11 | 33 |
neuroblast | 1.86e-11 | 33 |
electrically signaling cell | 1.86e-11 | 33 |
embryonic cell | 1.51e-10 | 70 |
neuron of the substantia nigra | 1.81e-08 | 3 |
striatum neuron | 4.37e-07 | 3 |
somatic stem cell | 4.41e-07 | 91 |
multi fate stem cell | 4.41e-07 | 91 |
Ontology term | p-value | n |
---|---|---|
basal ganglion | 2.90e-10 | 8 |
nuclear complex of neuraxis | 2.90e-10 | 8 |
aggregate regional part of brain | 2.90e-10 | 8 |
collection of basal ganglia | 2.90e-10 | 8 |
cerebral subcortex | 2.90e-10 | 8 |
regional part of spinal cord | 1.03e-08 | 5 |
gray matter of spinal cord | 1.03e-08 | 5 |
substantia nigra | 1.81e-08 | 3 |
telencephalic nucleus | 1.81e-08 | 3 |
midbrain nucleus | 1.81e-08 | 3 |
neural nucleus | 1.81e-08 | 3 |
nucleus of brain | 1.81e-08 | 3 |
spinal cord | 3.02e-07 | 6 |
dorsal region element | 3.02e-07 | 6 |
dorsum | 3.02e-07 | 6 |
central nervous system | 5.88e-07 | 73 |