FFCP PHASE1:Mm9::chr9:61220272..61220285,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=21887|HGNC=|MCL_coexpression_id=3719|UniProt=E0CXS2|association_with_transcript=82bp_to_ENSMUST00000159386_5end|description=CAGE_peak_1_at_Tle3_5end|id=chr9:61220272..61220285,+|ontology_enrichment_celltype=CL:0000144!4.17e-07!121;CL:0000012!4.17e-07!121|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003408!3.58e-08!24;UBERON:0002370!4.68e-08!23;UBERON:0000974!4.68e-08!23;UBERON:0004807!4.68e-08!23;UBERON:0005058!4.68e-08!23;UBERON:0003351!4.68e-08!23;UBERON:0009113!4.68e-08!23;UBERON:0003295!4.68e-08!23;UBERON:0009722!4.68e-08!23;UBERON:0005562!4.68e-08!23;UBERON:0007690!4.68e-08!23;UBERON:0006562!6.44e-08!24;UBERON:0001557!6.44e-08!24;UBERON:0001042!6.44e-08!24;UBERON:0008814!6.44e-08!24;UBERON:0009145!6.44e-08!24|ontology_enrichment_uberon_v019_2=UBERON:0000153,1.07e-10,43;UBERON:0007811,2.85e-08,36;UBERON:0003408,3.58e-08,24;UBERON:0002370,4.68e-08,23;UBERON:0000974,4.68e-08,23;UBERON:0004807,4.68e-08,23;UBERON:0005058,4.68e-08,23;UBERON:0003351,4.68e-08,23;UBERON:0009113,4.68e-08,23;UBERON:0003295,4.68e-08,23;UBERON:0009722,4.68e-08,23;UBERON:0005562,4.68e-08,23;UBERON:0007690,4.68e-08,23;UBERON:0006562,6.44e-08,24;UBERON:0001557,6.44e-08,24;UBERON:0001042,6.44e-08,24;UBERON:0008814,6.44e-08,24;UBERON:0009145,6.44e-08,24;UBERON:0000077,7.65e-07,35|phase1_expression=22.1005409004616,75.7276634577414,71.8898798235467,24.1971369045464,25.0447864973174,35.7582849172325,22.4268134971705,33.5720640948098,67.8601640771034,73.7303257914279,22.6007718057667,32.7065851880879,34.924948905966,36.5417282111409,9.99329285446988,10.1237633694913,2.09868563438444,29.8111746263535,28.2455733227822,21.6438722416995,18.9646537036886,20.5532268985833,10.9703911438353,26.2387573381187,22.4821095445827,60.2943562320771,44.3684856043847,39.4312355815177,32.4940047270399,29.235495052152,21.5078595335646,36.196748387199,30.7532393792285,15.8481681015439,15.5979874665688,13.1325369833209,14.9043630071529,57.3388334109564,28.1280724028568,34.5525671022707,63.5290007073495,66.2554120409692,44.6669524788661,13.7227531593379,13.787262645854,11.5634453861859,32.8604364626176,34.8840250208714,55.3609180490869,36.358391126891,17.4983027031703,23.0004102983955,24.831825696545,36.9934692425786,30.9206295211067,16.9791227783725,12.6074713573053,11.3447860301037,28.7289374420629,23.2756030879694,17.747279298173,19.3141383279405,14.2287167377782,22.9474427906757,19.7773272513395,15.6305625288142,32.3568119359877,37.2691756161908,24.9891965663431,31.9964073846107,33.021018932167,13.4255962669788,12.8103753751936,30.7451906029535,41.9803163059875,16.5459381589804,2.20231761998777,8.04430229936683,7.37311359629969,17.1452174049252,20.5847198105422,15.106487746146,6.42120897703176,8.4414391504752,12.6822545654752,11.7851434189467,12.8134512719193,17.5215479075783,14.5394291199713,35.3674901299756,18.2614627882057,12.9063581547208,15.6393406752783,3.2382191498269,5.84798775702902,3.13618820968135,9.12888730856387,10.2258193546835,9.35229616570328,9.89350808628953,20.8448261269487,10.2661181931454,12.7402619853323,35.5533351576666,7.79367747640371,8.36087556067825,7.07734223020697,10.1623652949963,13.4647699496529,16.92240385339,18.5629299639765,18.2679286987285,20.0635482612771,19.4432206312883,24.1056849628195,17.3419896034952,16.0676729027343,16.4843266888699,6.19227386364912,11.3236794963186,11.9254419968613,11.1521308221101,9.31958806090611,14.3462590535658,21.5730108017859,21.9693067479389,19.529865294465,14.3976655438418,19.695885196325,8.23848516726525,1.83000241127451,14.9528679014309,4.34560800480691,6.39288643325826,8.3115217823824,6.00292673350703,11.5078481150857,13.31154585528,9.85618757891331,18.7293251738962,22.380716189585,11.4951052216736,18.0062129805349,17.7831685046144,23.6086652055108,21.6512187281396,22.113606996096,13.9699820199068,27.377135102471,33.0935640293684,36.7737849502653,22.3579647076126,24.190110682627,27.5119211552512,24.6938563689532,14.7285357445685,12.6398373716382,14.411482798424,9.37739548005456,8.28503090142008,10.0846205791871,4.8616756594474,7.33908680314152,5.90292695242211,6.78775296704464,4.18561100550734,7.51165523918934,3.50296027101508,4.27855609775049,12.3125598059321,8.02581214503972,9.5029991826466,6.80605357402257,6.1734952629771,5.88811855979556,11.216602749342,21.4772208939469,16.6603856998033,20.4756720513825,19.2756437644164,16.1084326652617,18.7565677899709,16.0112191568307,16.1691782195675,24.6755112003146,18.1168850196412,30.9142306824331,25.2674719492262,28.2697926322724,24.268124033664,17.2910439899755,17.1261494998756,14.4147604724342,16.6802828410204,25.9227792048085,14.6628956048626,19.2012962295949,17.183275873128,17.0738650235495,12.1040321343274,16.4848664233444,10.3653617694312,4.15033677922008,7.34118465150814,5.89676985339609,6.74586337154561,4.66578279193557,3.13530307678142,5.0925170356284,7.48009957372108,8.91743747262695,6.04035109013779,25.8782771749238,9.67566463938109,10.6092808858951,6.56705082662491,6.45830688678884,2.8946611281802,11.6394509804961,8.90609635321278,13.0371981153621,16.4652733201932,16.1936271319066,12.730475565578,10.9500074807566,16.3912264200551,16.5516901311501,18.3815692408483,18.1778436269535,15.0754249538479,12.9513736399422,17.9364832641074,12.0633027151418,13.5976420954677,10.3270497333998,15.452457793065,6.58257418949947,7.61875962849321,11.8033160671206,5.55436039849621,14.5133780931478,11.7131623288992,20.2497993868831,24.8527549870654,24.0622568008986,21.2307398091624,20.2405350837447,20.1656541958805,18.5785255634866,18.6366363524648,11.4971469018698,17.2723635557238,13.0309567482861,16.1670720513085,18.5843193675948,15.7807413500738,10.2790009368015,10.1846743068185,14.7650946440386,10.1453598821496,14.9888410037568,11.9966130727577,14.6163925137736,11.3773232856894,17.9211634577498,9.28219889233682,11.9153862013826,21.7873923777885,24.8368672862889,25.7204442037911,22.1675292052842,20.6907828418402,17.9358432456312,23.1393361327095,29.8033069240912,21.183207086382,14.5548742716275,28.1955492529931,26.8030948315203,31.0008434130721,40.3478522730601,44.6463247306567,22.4440244204985,9.27126510052548,11.1066072518604,17.5428837768739,12.9636169158798,12.0555812483002,13.9428112275446,15.328137604837,21.2473037492319,20.7128149439014,24.461395363383,16.2294005062569,21.5108475635172,16.062237903021,16.0927957824484,15.0543573130417,18.9975430459175,16.7231789517178,15.7868100435392,22.7727669526106,15.8130267415987,21.1255366449555,14.6560164057889,13.1574560518701,10.7548018797113,10.3059129822345,11.1077448190849,9.12363077650202,8.44972118249428,11.5881902511116,18.4552446189251,11.5960377996483,19.298010419277,17.696622755178,16.2180172232131,24.4452078052289,28.9723435240483,30.2555115678044,28.8087964432834,27.8853442886328,30.8671111794866,26.0493440866221,27.2058299758349,31.7602483181048,31.089063955981,37.2339827148075,34.4786861435628,16.7780483875256,30.856047518995,27.6318678357185,30.5550001782623,19.5121489972512,15.0145980360946,21.0624367907355,30.6546782083064,13.0408747049194,5.64751842617067,8.28585425712918,8.02053718815155,10.3111909406213,2.74033007908257,6.7985450765073,7.42524750254986,4.05289082901798,4.53142408984205,3.62432218226274,29.7869687566587,18.7541690498485,10.9269507682646,16.531256760644,11.528723944539,10.6629234901008,10.2233494788743,10.9198580336614,8.3438994493872,11.8767689528985,11.9135270948413,12.0720858487089,15.4508487325306,16.4544641680514,19.5280594449085,12.859929664643,16.4555742841695,14.2752823143142,11.5384052224926,11.9231125308862,9.60033906679163,11.7134032065163,11.6833733074187,10.174249164263,13.7399695406383,14.63832716526,10.7927503994936,10.2597187460759,12.4939784738193,6.17256498823512,9.01626137743724,13.0025916735744,6.54769669071503,14.5640630714808,12.346023102793,18.485982767408,11.9305120307158,9.66919743217342,15.876931561714,10.1472052794977,6.26043156175138|short_description=p1@Tle3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=21887 | |||
|HGNC= | |||
|MCL_coexpression_id=3719 | |||
|TSSclassifier=NA | |||
|UniProt=E0CXS2 | |||
|association_with_transcript=82bp_to_ENSMUST00000159386_5end | |||
|cluster_id=chr9:61220272..61220285,+ | |||
|description=CAGE_peak_1_at_Tle3_5end | |||
|id=chr9:61220272..61220285,+ | |||
|ontology_enrichment_celltype=CL:0000144!4.17e-07!121;CL:0000012!4.17e-07!121 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003408!3.58e-08!24;UBERON:0002370!4.68e-08!23;UBERON:0000974!4.68e-08!23;UBERON:0004807!4.68e-08!23;UBERON:0005058!4.68e-08!23;UBERON:0003351!4.68e-08!23;UBERON:0009113!4.68e-08!23;UBERON:0003295!4.68e-08!23;UBERON:0009722!4.68e-08!23;UBERON:0005562!4.68e-08!23;UBERON:0007690!4.68e-08!23;UBERON:0006562!6.44e-08!24;UBERON:0001557!6.44e-08!24;UBERON:0001042!6.44e-08!24;UBERON:0008814!6.44e-08!24;UBERON:0009145!6.44e-08!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,1.07e-10,43;UBERON:0007811,2.85e-08,36;UBERON:0003408,3.58e-08,24;UBERON:0002370,4.68e-08,23;UBERON:0000974,4.68e-08,23;UBERON:0004807,4.68e-08,23;UBERON:0005058,4.68e-08,23;UBERON:0003351,4.68e-08,23;UBERON:0009113,4.68e-08,23;UBERON:0003295,4.68e-08,23;UBERON:0009722,4.68e-08,23;UBERON:0005562,4.68e-08,23;UBERON:0007690,4.68e-08,23;UBERON:0006562,6.44e-08,24;UBERON:0001557,6.44e-08,24;UBERON:0001042,6.44e-08,24;UBERON:0008814,6.44e-08,24;UBERON:0009145,6.44e-08,24;UBERON:0000077,7.65e-07,35 | |||
|phase1_expression=22.1005409004616,75.7276634577414,71.8898798235467,24.1971369045464,25.0447864973174,35.7582849172325,22.4268134971705,33.5720640948098,67.8601640771034,73.7303257914279,22.6007718057667,32.7065851880879,34.924948905966,36.5417282111409,9.99329285446988,10.1237633694913,2.09868563438444,29.8111746263535,28.2455733227822,21.6438722416995,18.9646537036886,20.5532268985833,10.9703911438353,26.2387573381187,22.4821095445827,60.2943562320771,44.3684856043847,39.4312355815177,32.4940047270399,29.235495052152,21.5078595335646,36.196748387199,30.7532393792285,15.8481681015439,15.5979874665688,13.1325369833209,14.9043630071529,57.3388334109564,28.1280724028568,34.5525671022707,63.5290007073495,66.2554120409692,44.6669524788661,13.7227531593379,13.787262645854,11.5634453861859,32.8604364626176,34.8840250208714,55.3609180490869,36.358391126891,17.4983027031703,23.0004102983955,24.831825696545,36.9934692425786,30.9206295211067,16.9791227783725,12.6074713573053,11.3447860301037,28.7289374420629,23.2756030879694,17.747279298173,19.3141383279405,14.2287167377782,22.9474427906757,19.7773272513395,15.6305625288142,32.3568119359877,37.2691756161908,24.9891965663431,31.9964073846107,33.021018932167,13.4255962669788,12.8103753751936,30.7451906029535,41.9803163059875,16.5459381589804,2.20231761998777,8.04430229936683,7.37311359629969,17.1452174049252,20.5847198105422,15.106487746146,6.42120897703176,8.4414391504752,12.6822545654752,11.7851434189467,12.8134512719193,17.5215479075783,14.5394291199713,35.3674901299756,18.2614627882057,12.9063581547208,15.6393406752783,3.2382191498269,5.84798775702902,3.13618820968135,9.12888730856387,10.2258193546835,9.35229616570328,9.89350808628953,20.8448261269487,10.2661181931454,12.7402619853323,35.5533351576666,7.79367747640371,8.36087556067825,7.07734223020697,10.1623652949963,13.4647699496529,16.92240385339,18.5629299639765,18.2679286987285,20.0635482612771,19.4432206312883,24.1056849628195,17.3419896034952,16.0676729027343,16.4843266888699,6.19227386364912,11.3236794963186,11.9254419968613,11.1521308221101,9.31958806090611,14.3462590535658,21.5730108017859,21.9693067479389,19.529865294465,14.3976655438418,19.695885196325,8.23848516726525,1.83000241127451,14.9528679014309,4.34560800480691,6.39288643325826,8.3115217823824,6.00292673350703,11.5078481150857,13.31154585528,9.85618757891331,18.7293251738962,22.380716189585,11.4951052216736,18.0062129805349,17.7831685046144,23.6086652055108,21.6512187281396,22.113606996096,13.9699820199068,27.377135102471,33.0935640293684,36.7737849502653,22.3579647076126,24.190110682627,27.5119211552512,24.6938563689532,14.7285357445685,12.6398373716382,14.411482798424,9.37739548005456,8.28503090142008,10.0846205791871,4.8616756594474,7.33908680314152,5.90292695242211,6.78775296704464,4.18561100550734,7.51165523918934,3.50296027101508,4.27855609775049,12.3125598059321,8.02581214503972,9.5029991826466,6.80605357402257,6.1734952629771,5.88811855979556,11.216602749342,21.4772208939469,16.6603856998033,20.4756720513825,19.2756437644164,16.1084326652617,18.7565677899709,16.0112191568307,16.1691782195675,24.6755112003146,18.1168850196412,30.9142306824331,25.2674719492262,28.2697926322724,24.268124033664,17.2910439899755,17.1261494998756,14.4147604724342,16.6802828410204,25.9227792048085,14.6628956048626,19.2012962295949,17.183275873128,17.0738650235495,12.1040321343274,16.4848664233444,10.3653617694312,4.15033677922008,7.34118465150814,5.89676985339609,6.74586337154561,4.66578279193557,3.13530307678142,5.0925170356284,7.48009957372108,8.91743747262695,6.04035109013779,25.8782771749238,9.67566463938109,10.6092808858951,6.56705082662491,6.45830688678884,2.8946611281802,11.6394509804961,8.90609635321278,13.0371981153621,16.4652733201932,16.1936271319066,12.730475565578,10.9500074807566,16.3912264200551,16.5516901311501,18.3815692408483,18.1778436269535,15.0754249538479,12.9513736399422,17.9364832641074,12.0633027151418,13.5976420954677,10.3270497333998,15.452457793065,6.58257418949947,7.61875962849321,11.8033160671206,5.55436039849621,14.5133780931478,11.7131623288992,20.2497993868831,24.8527549870654,24.0622568008986,21.2307398091624,20.2405350837447,20.1656541958805,18.5785255634866,18.6366363524648,11.4971469018698,17.2723635557238,13.0309567482861,16.1670720513085,18.5843193675948,15.7807413500738,10.2790009368015,10.1846743068185,14.7650946440386,10.1453598821496,14.9888410037568,11.9966130727577,14.6163925137736,11.3773232856894,17.9211634577498,9.28219889233682,11.9153862013826,21.7873923777885,24.8368672862889,25.7204442037911,22.1675292052842,20.6907828418402,17.9358432456312,23.1393361327095,29.8033069240912,21.183207086382,14.5548742716275,28.1955492529931,26.8030948315203,31.0008434130721,40.3478522730601,44.6463247306567,22.4440244204985,9.27126510052548,11.1066072518604,17.5428837768739,12.9636169158798,12.0555812483002,13.9428112275446,15.328137604837,21.2473037492319,20.7128149439014,24.461395363383,16.2294005062569,21.5108475635172,16.062237903021,16.0927957824484,15.0543573130417,18.9975430459175,16.7231789517178,15.7868100435392,22.7727669526106,15.8130267415987,21.1255366449555,14.6560164057889,13.1574560518701,10.7548018797113,10.3059129822345,11.1077448190849,9.12363077650202,8.44972118249428,11.5881902511116,18.4552446189251,11.5960377996483,19.298010419277,17.696622755178,16.2180172232131,24.4452078052289,28.9723435240483,30.2555115678044,28.8087964432834,27.8853442886328,30.8671111794866,26.0493440866221,27.2058299758349,31.7602483181048,31.089063955981,37.2339827148075,34.4786861435628,16.7780483875256,30.856047518995,27.6318678357185,30.5550001782623,19.5121489972512,15.0145980360946,21.0624367907355,30.6546782083064,13.0408747049194,5.64751842617067,8.28585425712918,8.02053718815155,10.3111909406213,2.74033007908257,6.7985450765073,7.42524750254986,4.05289082901798,4.53142408984205,3.62432218226274,29.7869687566587,18.7541690498485,10.9269507682646,16.531256760644,11.528723944539,10.6629234901008,10.2233494788743,10.9198580336614,8.3438994493872,11.8767689528985,11.9135270948413,12.0720858487089,15.4508487325306,16.4544641680514,19.5280594449085,12.859929664643,16.4555742841695,14.2752823143142,11.5384052224926,11.9231125308862,9.60033906679163,11.7134032065163,11.6833733074187,10.174249164263,13.7399695406383,14.63832716526,10.7927503994936,10.2597187460759,12.4939784738193,6.17256498823512,9.01626137743724,13.0025916735744,6.54769669071503,14.5640630714808,12.346023102793,18.485982767408,11.9305120307158,9.66919743217342,15.876931561714,10.1472052794977,6.26043156175138 | |||
|short_description=p1@Tle3 | |||
}} |
Latest revision as of 23:02, 26 September 2015
Short description: | p1@Tle3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tle3_5end |
Coexpression cluster: | MCL_coexpression_mm9:3719 |
Association with transcript: | 82bp_to_ENSMUST00000159386_5end |
EntrezGene: | Tle3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anterior region of body | 1.07e-10 | 43 |
craniocervical region | 2.85e-08 | 36 |
gland of gut | 3.58e-08 | 24 |
thymus | 4.68e-08 | 23 |
neck | 4.68e-08 | 23 |
respiratory system epithelium | 4.68e-08 | 23 |
hemolymphoid system gland | 4.68e-08 | 23 |
pharyngeal epithelium | 4.68e-08 | 23 |
thymic region | 4.68e-08 | 23 |
pharyngeal gland | 4.68e-08 | 23 |
entire pharyngeal arch endoderm | 4.68e-08 | 23 |
thymus primordium | 4.68e-08 | 23 |
early pharyngeal endoderm | 4.68e-08 | 23 |
pharynx | 6.44e-08 | 24 |
upper respiratory tract | 6.44e-08 | 24 |
chordate pharynx | 6.44e-08 | 24 |
pharyngeal arch system | 6.44e-08 | 24 |
pharyngeal region of foregut | 6.44e-08 | 24 |
mixed endoderm/mesoderm-derived structure | 7.65e-07 | 35 |