FFCP PHASE1:Mm9::chr9:60497556..60497597,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=102747|HGNC=|MCL_coexpression_id=20|UniProt=D3YUD9|association_with_transcript=0bp_to_uc009pzb.1_5end|description=CAGE_peak_5_at_Lrrc49_5end|id=chr9:60497556..60497597,-|ontology_enrichment_celltype=CL:0000117!1.67e-08!23;CL:0000337!1.67e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,2.39e-09,23;CL:0000337,2.39e-09,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!6.30e-26!71;UBERON:0003075!6.30e-26!71;UBERON:0007284!6.30e-26!71;UBERON:0004121!7.33e-25!102;UBERON:0000924!7.33e-25!102;UBERON:0006601!7.33e-25!102;UBERON:0000033!5.14e-20!63;UBERON:0001017!9.42e-19!73;UBERON:0005743!9.42e-19!73;UBERON:0000073!2.30e-18!75;UBERON:0001016!2.30e-18!75;UBERON:0001049!3.50e-17!52;UBERON:0005068!3.50e-17!52;UBERON:0006241!3.50e-17!52;UBERON:0007135!3.50e-17!52;UBERON:0000955!3.79e-16!50;UBERON:0006238!3.79e-16!50;UBERON:0002616!1.78e-15!49;UBERON:0003056!6.68e-15!49;UBERON:0002020!2.38e-13!34;UBERON:0003080!3.76e-11!40;UBERON:0002780!1.69e-10!39;UBERON:0001890!1.69e-10!39;UBERON:0006240!1.69e-10!39;UBERON:0002791!2.35e-10!29;UBERON:0003528!2.35e-10!29;UBERON:0001893!2.35e-10!29;UBERON:0007811!6.78e-09!86;UBERON:0002021!2.14e-07!10;UBERON:0000411!2.14e-07!10;UBERON:0001950!2.14e-07!10;UBERON:0003076!3.01e-07!12;UBERON:0003057!3.01e-07!12;UBERON:0002619!9.37e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.31e-25,64;UBERON:0003075,1.31e-25,64;UBERON:0007284,1.31e-25,64;UBERON:0000073,3.60e-25,54;UBERON:0001049,7.35e-23,52;UBERON:0005068,7.35e-23,52;UBERON:0006241,7.35e-23,52;UBERON:0007135,7.35e-23,52;UBERON:0010314,1.26e-21,92;UBERON:0010371,7.64e-21,73;UBERON:0001017,2.15e-20,73;UBERON:0004121,1.27e-19,95;UBERON:0000924,1.27e-19,95;UBERON:0006601,1.27e-19,95;UBERON:0001016,1.65e-19,75;UBERON:0000955,7.93e-18,47;UBERON:0006238,7.93e-18,47;UBERON:0003056,8.89e-18,49;UBERON:0002020,1.21e-17,34;UBERON:0002616,8.28e-17,46;UBERON:0003080,1.37e-13,40;UBERON:0003528,8.36e-13,29;UBERON:0002791,8.36e-13,29;UBERON:0001893,8.36e-13,29;UBERON:0002780,1.40e-12,39;UBERON:0001890,1.40e-12,39;UBERON:0006240,1.40e-12,39;UBERON:0002021,1.07e-11,10;UBERON:0000411,1.07e-11,10;UBERON:0001950,1.07e-11,10;UBERON:0003076,7.88e-11,12;UBERON:0003057,7.88e-11,12;UBERON:0002619,1.87e-08,17;UBERON:0002240,3.68e-08,6;UBERON:0005174,3.68e-08,6;UBERON:0001137,3.68e-08,6;UBERON:0002369,6.28e-08,7;UBERON:0006858,6.28e-08,7;UBERON:0000956,1.25e-07,21;UBERON:0001869,1.25e-07,21;UBERON:0000203,1.25e-07,21;UBERON:0002420,6.16e-07,8;UBERON:0007245,6.16e-07,8;UBERON:0010009,6.16e-07,8;UBERON:0010011,6.16e-07,8;UBERON:0000454,6.16e-07,8;UBERON:0001948,8.88e-07,5;UBERON:0002315,8.88e-07,5;UBERON:0011216,8.92e-07,194|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8064285749853,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.659058548203415,0,0.699932108126813,1.43752564364972,0,0,0,0,0,0,0.606949382578793,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.311068836925433,0.135005938331691,0,7.14127461009509,7.06779331045163,0.367472397644862,0,1.83843757322004,17.6185409599022,12.3856717942632,10.2916377281683,0.659431438650969,1.00636407962651,1.56274011167028,24.5681039121215,10.1297269805702,7.02871939773326,5.00868595305235,4.9830088279686,2.23679334990361,0,0.529000920747499,0,0,0,0,0,0,0.842666520790511,0,0,0,0.845060518660083,0,0,0,0,0,0,0.11418387971906,0,4.75014845007439,1.04091196059682,2.43572382649713,4.84292544237723,3.16517545160507,3.88042733547826,5.52933001850572,0,0.144599356919912,0,0.161766849947409,0,0,3.72783522436244,30.1564220921894,20.3163305609051,1.27728527604296,0,0,0,14.2301107434582,7.77751024791665,1.38219787324151,7.82209440865244,7.41574826257959,11.2205544062162,8.11206315338788,0.712875546952214,0.124406970610093,0.252722758433675,0.631325567659422,0.520481771850815,1.37941262660084,1.62055916824814,2.71268672104287,2.85753296435577,1.7935920839879,1.68663104207512,4.65666067330228,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0.154267112887378,0.465067889500816,0.268273401399619,0,0,0.164167464079095,0,0,0,0,2.94405927989778,0.617427674275707,0,0,0,0.464473343720877,0.257734922644187,0,0.444756087689741,1.33157938278791,1.42358718463353,0.988193728344065,2.01068167040216,2.58643413653496,1.55971269695296,0,1.51296634912286,0.796565093017469,0,0.114248512609729,0,0,0.387904974335251,0.140271639780637,0.758838445491087,0.147610147979602,0.31399745568275,0.246794327843601,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0.184753190166605,0,0.325929952884052,0,0.234690248288502,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,43.3486592967038,30.7094618871572,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0.238968797952552,0.222798674082394,0,0,0,0,7.71171159412337,1.27746076687442,0.534196811001766,0.977321756121456,0.329940245945071,0,0.242780636154981,0,0.188605079755898,0,0,0.516856586336442,0,0,0.632073515871632,0,0,1.36175842301515,0,0,0,0.177340233642274,0.356737635204141,1.15184314421485,0.608929898229199,0,0,0.661585194164886,0.16488625294148,0.161464426695906,0.0603129249281559,0.119372344003136,0.328281799490123,0,59.8923725493946,0,0.412773735926445,0,0,0,0,0,0,0,2.86401185404534,0.158167996790568,0.203319467126849,0.86404272657441,0.836353184057875,1.52853794622324,1.48350781023303,2.31429676030941,2.6175594198403,3.6292192521702,0,0,0,0,0,0.129159823477731,0.337912250981556,0.469428954583016,0.39061315453185,0.419437377702843,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,2.31827512838629,0.187682475451182,0.183151624267265,0,0,4.51801474093653,4.60325236507177,4.58316410751517,2.749650917499,3.42541259885321,4.5323633843382,8.77529250301348,4.5032120322422,6.34399372577886,4.14208249401456,0,0,0.170733605754134,0,0.209613162627982,0.551530525350042,0,1.03017528619447,0.962757628775446,0.252697211763798,0,0,0.655490552289177,0.704276676453562,0.689225627467359,0.476293691283074,0.463537303779422,0.192909220463705,0,0.735994600671987,0.342869252385415,0.177475806159338,0.715308569841963,0.726732083161643,0.188218760830661,0.592302255241736,0.182927972872773,1.57841826862706,0.271608227691724,0,0.355905054372522,0.0985044823755635,2.45538625901814,0.464810523557898,0,0.749431733813838,0.935726433781634,0,0.382576664137687,1.32354851471709,0.463735671240843|short_description=p5@Lrrc49}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=102747 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=D3YUD9 | |||
|association_with_transcript=0bp_to_uc009pzb.1_5end | |||
|cluster_id=chr9:60497556..60497597,- | |||
|description=CAGE_peak_5_at_Lrrc49_5end | |||
|id=chr9:60497556..60497597,- | |||
|ontology_enrichment_celltype=CL:0000117!1.67e-08!23;CL:0000337!1.67e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.39e-09,23;CL:0000337,2.39e-09,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!6.30e-26!71;UBERON:0003075!6.30e-26!71;UBERON:0007284!6.30e-26!71;UBERON:0004121!7.33e-25!102;UBERON:0000924!7.33e-25!102;UBERON:0006601!7.33e-25!102;UBERON:0000033!5.14e-20!63;UBERON:0001017!9.42e-19!73;UBERON:0005743!9.42e-19!73;UBERON:0000073!2.30e-18!75;UBERON:0001016!2.30e-18!75;UBERON:0001049!3.50e-17!52;UBERON:0005068!3.50e-17!52;UBERON:0006241!3.50e-17!52;UBERON:0007135!3.50e-17!52;UBERON:0000955!3.79e-16!50;UBERON:0006238!3.79e-16!50;UBERON:0002616!1.78e-15!49;UBERON:0003056!6.68e-15!49;UBERON:0002020!2.38e-13!34;UBERON:0003080!3.76e-11!40;UBERON:0002780!1.69e-10!39;UBERON:0001890!1.69e-10!39;UBERON:0006240!1.69e-10!39;UBERON:0002791!2.35e-10!29;UBERON:0003528!2.35e-10!29;UBERON:0001893!2.35e-10!29;UBERON:0007811!6.78e-09!86;UBERON:0002021!2.14e-07!10;UBERON:0000411!2.14e-07!10;UBERON:0001950!2.14e-07!10;UBERON:0003076!3.01e-07!12;UBERON:0003057!3.01e-07!12;UBERON:0002619!9.37e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.31e-25,64;UBERON:0003075,1.31e-25,64;UBERON:0007284,1.31e-25,64;UBERON:0000073,3.60e-25,54;UBERON:0001049,7.35e-23,52;UBERON:0005068,7.35e-23,52;UBERON:0006241,7.35e-23,52;UBERON:0007135,7.35e-23,52;UBERON:0010314,1.26e-21,92;UBERON:0010371,7.64e-21,73;UBERON:0001017,2.15e-20,73;UBERON:0004121,1.27e-19,95;UBERON:0000924,1.27e-19,95;UBERON:0006601,1.27e-19,95;UBERON:0001016,1.65e-19,75;UBERON:0000955,7.93e-18,47;UBERON:0006238,7.93e-18,47;UBERON:0003056,8.89e-18,49;UBERON:0002020,1.21e-17,34;UBERON:0002616,8.28e-17,46;UBERON:0003080,1.37e-13,40;UBERON:0003528,8.36e-13,29;UBERON:0002791,8.36e-13,29;UBERON:0001893,8.36e-13,29;UBERON:0002780,1.40e-12,39;UBERON:0001890,1.40e-12,39;UBERON:0006240,1.40e-12,39;UBERON:0002021,1.07e-11,10;UBERON:0000411,1.07e-11,10;UBERON:0001950,1.07e-11,10;UBERON:0003076,7.88e-11,12;UBERON:0003057,7.88e-11,12;UBERON:0002619,1.87e-08,17;UBERON:0002240,3.68e-08,6;UBERON:0005174,3.68e-08,6;UBERON:0001137,3.68e-08,6;UBERON:0002369,6.28e-08,7;UBERON:0006858,6.28e-08,7;UBERON:0000956,1.25e-07,21;UBERON:0001869,1.25e-07,21;UBERON:0000203,1.25e-07,21;UBERON:0002420,6.16e-07,8;UBERON:0007245,6.16e-07,8;UBERON:0010009,6.16e-07,8;UBERON:0010011,6.16e-07,8;UBERON:0000454,6.16e-07,8;UBERON:0001948,8.88e-07,5;UBERON:0002315,8.88e-07,5;UBERON:0011216,8.92e-07,194 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8064285749853,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.659058548203415,0,0.699932108126813,1.43752564364972,0,0,0,0,0,0,0.606949382578793,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.311068836925433,0.135005938331691,0,7.14127461009509,7.06779331045163,0.367472397644862,0,1.83843757322004,17.6185409599022,12.3856717942632,10.2916377281683,0.659431438650969,1.00636407962651,1.56274011167028,24.5681039121215,10.1297269805702,7.02871939773326,5.00868595305235,4.9830088279686,2.23679334990361,0,0.529000920747499,0,0,0,0,0,0,0.842666520790511,0,0,0,0.845060518660083,0,0,0,0,0,0,0.11418387971906,0,4.75014845007439,1.04091196059682,2.43572382649713,4.84292544237723,3.16517545160507,3.88042733547826,5.52933001850572,0,0.144599356919912,0,0.161766849947409,0,0,3.72783522436244,30.1564220921894,20.3163305609051,1.27728527604296,0,0,0,14.2301107434582,7.77751024791665,1.38219787324151,7.82209440865244,7.41574826257959,11.2205544062162,8.11206315338788,0.712875546952214,0.124406970610093,0.252722758433675,0.631325567659422,0.520481771850815,1.37941262660084,1.62055916824814,2.71268672104287,2.85753296435577,1.7935920839879,1.68663104207512,4.65666067330228,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0.154267112887378,0.465067889500816,0.268273401399619,0,0,0.164167464079095,0,0,0,0,2.94405927989778,0.617427674275707,0,0,0,0.464473343720877,0.257734922644187,0,0.444756087689741,1.33157938278791,1.42358718463353,0.988193728344065,2.01068167040216,2.58643413653496,1.55971269695296,0,1.51296634912286,0.796565093017469,0,0.114248512609729,0,0,0.387904974335251,0.140271639780637,0.758838445491087,0.147610147979602,0.31399745568275,0.246794327843601,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0.184753190166605,0,0.325929952884052,0,0.234690248288502,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,43.3486592967038,30.7094618871572,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0.238968797952552,0.222798674082394,0,0,0,0,7.71171159412337,1.27746076687442,0.534196811001766,0.977321756121456,0.329940245945071,0,0.242780636154981,0,0.188605079755898,0,0,0.516856586336442,0,0,0.632073515871632,0,0,1.36175842301515,0,0,0,0.177340233642274,0.356737635204141,1.15184314421485,0.608929898229199,0,0,0.661585194164886,0.16488625294148,0.161464426695906,0.0603129249281559,0.119372344003136,0.328281799490123,0,59.8923725493946,0,0.412773735926445,0,0,0,0,0,0,0,2.86401185404534,0.158167996790568,0.203319467126849,0.86404272657441,0.836353184057875,1.52853794622324,1.48350781023303,2.31429676030941,2.6175594198403,3.6292192521702,0,0,0,0,0,0.129159823477731,0.337912250981556,0.469428954583016,0.39061315453185,0.419437377702843,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,2.31827512838629,0.187682475451182,0.183151624267265,0,0,4.51801474093653,4.60325236507177,4.58316410751517,2.749650917499,3.42541259885321,4.5323633843382,8.77529250301348,4.5032120322422,6.34399372577886,4.14208249401456,0,0,0.170733605754134,0,0.209613162627982,0.551530525350042,0,1.03017528619447,0.962757628775446,0.252697211763798,0,0,0.655490552289177,0.704276676453562,0.689225627467359,0.476293691283074,0.463537303779422,0.192909220463705,0,0.735994600671987,0.342869252385415,0.177475806159338,0.715308569841963,0.726732083161643,0.188218760830661,0.592302255241736,0.182927972872773,1.57841826862706,0.271608227691724,0,0.355905054372522,0.0985044823755635,2.45538625901814,0.464810523557898,0,0.749431733813838,0.935726433781634,0,0.382576664137687,1.32354851471709,0.463735671240843 | |||
|short_description=p5@Lrrc49 | |||
}} |
Latest revision as of 22:53, 26 September 2015
Short description: | p5@Lrrc49 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Lrrc49_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 0bp_to_uc009pzb.1_5end |
EntrezGene: | Lrrc49 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.39e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.39e-09 | 23 |