FFCP PHASE1:Mm9::chr9:57389282..57389286,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=286|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:57389282..57389286,+|id=chr9:57389282..57389286,+|ontology_enrichment_celltype=CL:0000055!9.11e-27!50;CL:0000221!1.90e-26!44;CL:0000133!1.90e-26!44;CL:0002319!5.48e-26!43;CL:0000393!8.36e-20!39;CL:0000211!8.36e-20!39;CL:0000540!1.49e-19!33;CL:0000047!1.49e-19!33;CL:0000031!1.49e-19!33;CL:0000404!1.49e-19!33;CL:0000117!1.53e-15!23;CL:0000337!1.53e-15!23;CL:0002321!3.44e-15!70;CL:0000220!3.44e-15!70;CL:0000723!2.26e-14!91;CL:0000048!2.26e-14!91;CL:0000034!1.34e-13!97;CL:0002371!2.23e-12!118;CL:0000548!4.37e-12!115;CL:0000004!4.37e-12!115;CL:0000255!4.37e-12!115;CL:0000144!6.62e-12!121;CL:0000012!6.62e-12!121;CL:0000333!3.42e-07!10;CL:0000095!3.42e-07!10;CL:0000243!3.42e-07!10;CL:0000123!3.42e-07!10;CL:0000125!3.42e-07!10;CL:0000030!3.42e-07!10;CL:0000339!3.42e-07!10|ontology_enrichment_celltype_v019_2=CL:0002319,1.03e-48,43;CL:0000221,2.22e-47,44;CL:0000133,2.22e-47,44;CL:0000540,2.70e-35,33;CL:0000047,2.70e-35,33;CL:0000031,2.70e-35,33;CL:0000404,2.70e-35,33;CL:0000393,3.10e-35,39;CL:0000211,3.10e-35,39;CL:0002321,1.55e-34,70;CL:0000117,1.74e-33,23;CL:0000337,1.74e-33,23;CL:0000723,4.75e-24,91;CL:0000048,4.75e-24,91;CL:0000034,6.70e-22,97;CL:0000333,2.27e-13,10;CL:0000095,2.27e-13,10;CL:0000243,2.27e-13,10;CL:0000123,2.27e-13,10;CL:0000125,2.27e-13,10;CL:0000030,2.27e-13,10;CL:0000339,2.27e-13,10;CL:0002453,5.38e-11,8;CL:0002609,1.11e-10,6;CL:0000128,1.46e-07,6;CL:0000126,1.46e-07,6;CL:0000127,1.46e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.20e-10!75;UBERON:0001016!1.20e-10!75;UBERON:0001017!8.31e-10!73;UBERON:0005743!8.31e-10!73;UBERON:0004121!4.17e-08!102;UBERON:0000924!4.17e-08!102;UBERON:0006601!4.17e-08!102|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.13e-23,75;UBERON:0001017,1.30e-21,73;UBERON:0004121,1.26e-16,95;UBERON:0000924,1.26e-16,95;UBERON:0006601,1.26e-16,95;UBERON:0002020,1.25e-14,34;UBERON:0000073,8.39e-12,54;UBERON:0001948,1.77e-09,5;UBERON:0002315,1.77e-09,5;UBERON:0001049,5.10e-09,52;UBERON:0005068,5.10e-09,52;UBERON:0006241,5.10e-09,52;UBERON:0007135,5.10e-09,52;UBERON:0003528,7.49e-09,29;UBERON:0002791,7.49e-09,29;UBERON:0001893,7.49e-09,29;UBERON:0002346,5.27e-08,64;UBERON:0003075,5.27e-08,64;UBERON:0007284,5.27e-08,64;UBERON:0002240,8.45e-08,6;UBERON:0005174,8.45e-08,6;UBERON:0001137,8.45e-08,6;UBERON:0002420,1.25e-07,8;UBERON:0007245,1.25e-07,8;UBERON:0010009,1.25e-07,8;UBERON:0010011,1.25e-07,8;UBERON:0000454,1.25e-07,8;UBERON:0010371,3.64e-07,73|phase1_expression=2.5623815536767,0,0,0,0,0,0,0.387369970324729,0,0.234064526321993,0.171217968225505,0.319088635981346,0.171200729931206,0.0874204024189974,0,0,0,0.473193248037357,0.274228867211478,0,0.0850432901510698,0.297872853602656,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,1.90509202037889,0.61506478758457,0,0.288851619751275,0.166234645358492,0,0.837063261473815,0,0.523523743973798,1.76469446409304,0,0,0.377690453926732,0.202753862439029,0,18.7773922643529,0.436050312760893,2.85592037554813,1.1665793944457,5.03951117851305,2.87505128729943,0.335565212115473,0,0,1.28629718017973,1.43266719969378,1.03134418455488,3.23706337375356,4.23192783417626,0.633831403506179,2.03306719241479,6.22506357277798,5.84934816232909,0.988866362566974,6.3943210345149,5.99200221036809,8.4528027170742,2.59224030771194,4.59020190327748,2.94454945891935,1.99955689082663,6.40518768759679,2.9397791811589,2.39613677545591,2.75765635983006,2.20231761998777,1.91531007127782,1.53606533256243,2.50583946687368,2.01272815925301,3.12548022334056,2.51264699101243,2.8138130501584,3.66715794664344,2.65165726926301,5.26775218956681,2.98239113320481,1.74170244666323,1.43585964202892,0,0.860423876981386,1.3599426674155,1.61910957491345,0,0,0.140444420131752,0,1.03914401841148,0,0.985903938436763,0,0,0,0,0.253359865475099,0,0,0,0.29688427812965,0.693941307064543,0.304465478312141,0.230615497256059,0.301445281105245,0.23517741427141,0.376999773989026,0,0,0,0,0.441683036920787,0,0,0.292780797011547,0,0.255457055208591,0,0,0.127070227073065,0.149790639404823,0,0.376963056338593,0,0,0,0,0.203678727700633,0,0,0.210441855886474,0.260240885925407,0.229902104433473,0,0.150704817835715,0.0680364991513279,0,0.187403449119458,0,0,0,0.175951124163949,0.219195732427575,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0.257347907114715,1.13665399758237,0,0,0,0.23674473558521,0.590292695242212,0.154267112887378,0,0,0,0.16455984991348,0.164167464079095,0.0810688095458557,0.146199987425332,0.219550115291051,0.268412837520744,0.210289948564127,0,0,1.85115396664481,0,0,0,0,0,0,0.474529061544512,0.164698954724011,0,0,0.38992817423824,0,0,0,0,0.228497025219458,0,0.203651327845314,0,0,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0.50925170356284,0,0.162135226775035,0.549122826376163,1.43768206527355,0,0.312037673114561,0,0,0,0.184753190166605,0.3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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=286 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr9:57389282..57389286,+ | |||
|description=CAGE_peak_at_chr9:57389282..57389286,+ | |||
|id=chr9:57389282..57389286,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.11e-27!50;CL:0000221!1.90e-26!44;CL:0000133!1.90e-26!44;CL:0002319!5.48e-26!43;CL:0000393!8.36e-20!39;CL:0000211!8.36e-20!39;CL:0000540!1.49e-19!33;CL:0000047!1.49e-19!33;CL:0000031!1.49e-19!33;CL:0000404!1.49e-19!33;CL:0000117!1.53e-15!23;CL:0000337!1.53e-15!23;CL:0002321!3.44e-15!70;CL:0000220!3.44e-15!70;CL:0000723!2.26e-14!91;CL:0000048!2.26e-14!91;CL:0000034!1.34e-13!97;CL:0002371!2.23e-12!118;CL:0000548!4.37e-12!115;CL:0000004!4.37e-12!115;CL:0000255!4.37e-12!115;CL:0000144!6.62e-12!121;CL:0000012!6.62e-12!121;CL:0000333!3.42e-07!10;CL:0000095!3.42e-07!10;CL:0000243!3.42e-07!10;CL:0000123!3.42e-07!10;CL:0000125!3.42e-07!10;CL:0000030!3.42e-07!10;CL:0000339!3.42e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.03e-48,43;CL:0000221,2.22e-47,44;CL:0000133,2.22e-47,44;CL:0000540,2.70e-35,33;CL:0000047,2.70e-35,33;CL:0000031,2.70e-35,33;CL:0000404,2.70e-35,33;CL:0000393,3.10e-35,39;CL:0000211,3.10e-35,39;CL:0002321,1.55e-34,70;CL:0000117,1.74e-33,23;CL:0000337,1.74e-33,23;CL:0000723,4.75e-24,91;CL:0000048,4.75e-24,91;CL:0000034,6.70e-22,97;CL:0000333,2.27e-13,10;CL:0000095,2.27e-13,10;CL:0000243,2.27e-13,10;CL:0000123,2.27e-13,10;CL:0000125,2.27e-13,10;CL:0000030,2.27e-13,10;CL:0000339,2.27e-13,10;CL:0002453,5.38e-11,8;CL:0002609,1.11e-10,6;CL:0000128,1.46e-07,6;CL:0000126,1.46e-07,6;CL:0000127,1.46e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.20e-10!75;UBERON:0001016!1.20e-10!75;UBERON:0001017!8.31e-10!73;UBERON:0005743!8.31e-10!73;UBERON:0004121!4.17e-08!102;UBERON:0000924!4.17e-08!102;UBERON:0006601!4.17e-08!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.13e-23,75;UBERON:0001017,1.30e-21,73;UBERON:0004121,1.26e-16,95;UBERON:0000924,1.26e-16,95;UBERON:0006601,1.26e-16,95;UBERON:0002020,1.25e-14,34;UBERON:0000073,8.39e-12,54;UBERON:0001948,1.77e-09,5;UBERON:0002315,1.77e-09,5;UBERON:0001049,5.10e-09,52;UBERON:0005068,5.10e-09,52;UBERON:0006241,5.10e-09,52;UBERON:0007135,5.10e-09,52;UBERON:0003528,7.49e-09,29;UBERON:0002791,7.49e-09,29;UBERON:0001893,7.49e-09,29;UBERON:0002346,5.27e-08,64;UBERON:0003075,5.27e-08,64;UBERON:0007284,5.27e-08,64;UBERON:0002240,8.45e-08,6;UBERON:0005174,8.45e-08,6;UBERON:0001137,8.45e-08,6;UBERON:0002420,1.25e-07,8;UBERON:0007245,1.25e-07,8;UBERON:0010009,1.25e-07,8;UBERON:0010011,1.25e-07,8;UBERON:0000454,1.25e-07,8;UBERON:0010371,3.64e-07,73 | |||
|phase1_expression=2.5623815536767,0,0,0,0,0,0,0.387369970324729,0,0.234064526321993,0.171217968225505,0.319088635981346,0.171200729931206,0.0874204024189974,0,0,0,0.473193248037357,0.274228867211478,0,0.0850432901510698,0.297872853602656,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,1.90509202037889,0.61506478758457,0,0.288851619751275,0.166234645358492,0,0.837063261473815,0,0.523523743973798,1.76469446409304,0,0,0.377690453926732,0.202753862439029,0,18.7773922643529,0.436050312760893,2.85592037554813,1.1665793944457,5.03951117851305,2.87505128729943,0.335565212115473,0,0,1.28629718017973,1.43266719969378,1.03134418455488,3.23706337375356,4.23192783417626,0.633831403506179,2.03306719241479,6.22506357277798,5.84934816232909,0.988866362566974,6.3943210345149,5.99200221036809,8.4528027170742,2.59224030771194,4.59020190327748,2.94454945891935,1.99955689082663,6.40518768759679,2.9397791811589,2.39613677545591,2.75765635983006,2.20231761998777,1.91531007127782,1.53606533256243,2.50583946687368,2.01272815925301,3.12548022334056,2.51264699101243,2.8138130501584,3.66715794664344,2.65165726926301,5.26775218956681,2.98239113320481,1.74170244666323,1.43585964202892,0,0.860423876981386,1.3599426674155,1.61910957491345,0,0,0.140444420131752,0,1.03914401841148,0,0.985903938436763,0,0,0,0,0.253359865475099,0,0,0,0.29688427812965,0.693941307064543,0.304465478312141,0.230615497256059,0.301445281105245,0.23517741427141,0.376999773989026,0,0,0,0,0.441683036920787,0,0,0.292780797011547,0,0.255457055208591,0,0,0.127070227073065,0.149790639404823,0,0.376963056338593,0,0,0,0,0.203678727700633,0,0,0.210441855886474,0.260240885925407,0.229902104433473,0,0.150704817835715,0.0680364991513279,0,0.187403449119458,0,0,0,0.175951124163949,0.219195732427575,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0.257347907114715,1.13665399758237,0,0,0,0.23674473558521,0.590292695242212,0.154267112887378,0,0,0,0.16455984991348,0.164167464079095,0.0810688095458557,0.146199987425332,0.219550115291051,0.268412837520744,0.210289948564127,0,0,1.85115396664481,0,0,0,0,0,0,0.474529061544512,0.164698954724011,0,0,0.38992817423824,0,0,0,0,0.228497025219458,0,0.203651327845314,0,0,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0.50925170356284,0,0.162135226775035,0.549122826376163,1.43768206527355,0,0.312037673114561,0,0,0,0.184753190166605,0.37898282354097,0,0.509235257325564,0,0.335012514883631,0.238043640886014,0.195133647857799,0.157635144106191,0.221464689648775,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,0.54390568381871,0,0,0,0.117211686592203,2.95082901678016,0.252470927204373,0.631016438832513,1.95219372148319,1.07711698866399,1.43381278771531,1.11399337041197,0.283076530788832,0.809621403349789,1.75353514746787,0.395287777946524,0,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0.971122544619926,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,0,0,0.356497378384721,0,1.05418608574999,0,0.340439605753788,0.18006109403131,0,0.857348140126369,0,0,0.329098041204242,0,0,0.21183207086382,0,0,0,0.0603129249281559,0.358117032009409,0,0,0.18542530201051,0,0.412773735926445,0,0.188368457004691,0.27338845544205,0.228778173206523,0.169978429993855,0.139951452323658,0,0,0,0,0,0.418176592028937,0.436725127492355,0.134864346384821,0,0,0,0,0,0.299033092087958,0.496375471371293,0,0.129159823477731,0.675824501963113,0.352071715937262,0.39061315453185,0.104859344425711,0.483168241652012,0,0,0.608175645870493,0.205421914329655,0.129920822977795,0,0.198681354781265,0,0.295379054349154,0.201932899896295,0.0762068066549998,0.201652370273681,0.38983152295901,0.384847366561318,0.233753804363138,0,0.665957860122194,0.179427713218951,0,0.19318959403219,0,0,0,0.501572104035363,0.564751842617067,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.341467211508268,0.486213434136588,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0,0,0.128050304809739,0.0574354689556133,0.476293691283074,0.231768651889711,0.578727661391115,0.412085900803307,0.147198920134397,0,0.354951612318675,0.476872379894642,0,0.188218760830661,0.0846146078916765,0.365855945745545,0,0,0,0,0.0985044823755635,1.22769312950907,0,0,0.499621155875892,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr9:57389282..57389286,+ | |||
}} |
Latest revision as of 09:05, 5 August 2015
Short description: | p@chr9:57389282..57389286, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:57389282..57389286, + |
Coexpression cluster: | MCL_coexpression_mm9:286 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.03e-48 | 43 |
ectodermal cell | 2.22e-47 | 44 |
neurectodermal cell | 2.22e-47 | 44 |
neuron | 2.70e-35 | 33 |
neuronal stem cell | 2.70e-35 | 33 |
neuroblast | 2.70e-35 | 33 |
electrically signaling cell | 2.70e-35 | 33 |
electrically responsive cell | 3.10e-35 | 39 |
electrically active cell | 3.10e-35 | 39 |
embryonic cell | 1.55e-34 | 70 |
CNS neuron (sensu Vertebrata) | 1.74e-33 | 23 |
neuroblast (sensu Vertebrata) | 1.74e-33 | 23 |
somatic stem cell | 4.75e-24 | 91 |
multi fate stem cell | 4.75e-24 | 91 |
stem cell | 6.70e-22 | 97 |
migratory neural crest cell | 2.27e-13 | 10 |
neuron associated cell | 2.27e-13 | 10 |
glial cell (sensu Vertebrata) | 2.27e-13 | 10 |
neuron associated cell (sensu Vertebrata) | 2.27e-13 | 10 |
glial cell | 2.27e-13 | 10 |
glioblast | 2.27e-13 | 10 |
glioblast (sensu Vertebrata) | 2.27e-13 | 10 |
oligodendrocyte precursor cell | 5.38e-11 | 8 |
neuron of cerebral cortex | 1.11e-10 | 6 |
oligodendrocyte | 1.46e-07 | 6 |
macroglial cell | 1.46e-07 | 6 |
astrocyte | 1.46e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.13e-23 | 75 |
central nervous system | 1.30e-21 | 73 |
ectoderm-derived structure | 1.26e-16 | 95 |
ectoderm | 1.26e-16 | 95 |
presumptive ectoderm | 1.26e-16 | 95 |
gray matter | 1.25e-14 | 34 |
regional part of nervous system | 8.39e-12 | 54 |
regional part of spinal cord | 1.77e-09 | 5 |
gray matter of spinal cord | 1.77e-09 | 5 |
neural tube | 5.10e-09 | 52 |
neural rod | 5.10e-09 | 52 |
future spinal cord | 5.10e-09 | 52 |
neural keel | 5.10e-09 | 52 |
brain grey matter | 7.49e-09 | 29 |
regional part of telencephalon | 7.49e-09 | 29 |
telencephalon | 7.49e-09 | 29 |
neurectoderm | 5.27e-08 | 64 |
neural plate | 5.27e-08 | 64 |
presumptive neural plate | 5.27e-08 | 64 |
spinal cord | 8.45e-08 | 6 |
dorsal region element | 8.45e-08 | 6 |
dorsum | 8.45e-08 | 6 |
basal ganglion | 1.25e-07 | 8 |
nuclear complex of neuraxis | 1.25e-07 | 8 |
aggregate regional part of brain | 1.25e-07 | 8 |
collection of basal ganglia | 1.25e-07 | 8 |
cerebral subcortex | 1.25e-07 | 8 |
ecto-epithelium | 3.64e-07 | 73 |