FFCP PHASE1:Mm9::chr9:56730814..56730824,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=58|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:56730814..56730824,-|id=chr9:56730814..56730824,-|ontology_enrichment_celltype=CL:0000473!8.25e-11!3;CL:0000627!8.25e-11!3;CL:0000682!8.25e-11!3;CL:0000239!6.30e-09!6;CL:0000677!6.30e-09!6;CL:0000212!6.30e-09!6;CL:0000584!6.30e-09!6;CL:0000075!1.19e-07!7|ontology_enrichment_celltype_v019_2=CL:0000682,3.62e-30,3;CL:0000239,4.37e-15,6;CL:0000677,4.37e-15,6;CL:0000584,4.37e-15,6;CL:0000066,4.94e-14,25;CL:0000473,2.31e-13,7;CL:0000075,4.95e-13,7;CL:0002563,2.78e-10,9;CL:0002251,2.78e-10,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!6.28e-10!15;UBERON:0001962!1.33e-07!2;UBERON:0001961!1.33e-07!2;UBERON:0001744!1.33e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.51e-23,15;UBERON:0001962,3.13e-20,2;UBERON:0001961,3.13e-20,2;UBERON:0001744,3.13e-20,2;UBERON:0004923,1.61e-14,24;UBERON:0002465,7.72e-14,3;UBERON:0001242,2.46e-12,13;UBERON:0001262,2.46e-12,13;UBERON:0004786,2.46e-12,13;UBERON:0003199,4.58e-11,1;UBERON:0003350,2.78e-10,9;UBERON:0004808,2.78e-10,9;UBERON:0001277,2.78e-10,9;UBERON:0000485,1.59e-08,11|phase1_expression=0,0.697950815278722,1.81999695755814,0,0,2.18243053485457,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75991665072747,2.06468352960453,1.72269589234506,3.87685796543167,4.30942465371778,0,0,2.43903561720835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.771778308107841,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49465875882444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0,0,0,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr9:56730814..56730824,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr9:56730814..56730824,- | |||
|description=CAGE_peak_at_chr9:56730814..56730824,- | |||
|id=chr9:56730814..56730824,- | |||
|ontology_enrichment_celltype=CL:0000473!8.25e-11!3;CL:0000627!8.25e-11!3;CL:0000682!8.25e-11!3;CL:0000239!6.30e-09!6;CL:0000677!6.30e-09!6;CL:0000212!6.30e-09!6;CL:0000584!6.30e-09!6;CL:0000075!1.19e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,3.62e-30,3;CL:0000239,4.37e-15,6;CL:0000677,4.37e-15,6;CL:0000584,4.37e-15,6;CL:0000066,4.94e-14,25;CL:0000473,2.31e-13,7;CL:0000075,4.95e-13,7;CL:0002563,2.78e-10,9;CL:0002251,2.78e-10,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!6.28e-10!15;UBERON:0001962!1.33e-07!2;UBERON:0001961!1.33e-07!2;UBERON:0001744!1.33e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.51e-23,15;UBERON:0001962,3.13e-20,2;UBERON:0001961,3.13e-20,2;UBERON:0001744,3.13e-20,2;UBERON:0004923,1.61e-14,24;UBERON:0002465,7.72e-14,3;UBERON:0001242,2.46e-12,13;UBERON:0001262,2.46e-12,13;UBERON:0004786,2.46e-12,13;UBERON:0003199,4.58e-11,1;UBERON:0003350,2.78e-10,9;UBERON:0004808,2.78e-10,9;UBERON:0001277,2.78e-10,9;UBERON:0000485,1.59e-08,11 | |||
|phase1_expression=0,0.697950815278722,1.81999695755814,0,0,2.18243053485457,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75991665072747,2.06468352960453,1.72269589234506,3.87685796543167,4.30942465371778,0,0,2.43903561720835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.771778308107841,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49465875882444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0,0,0,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr9:56730814..56730824,- | |||
}} |
Latest revision as of 08:43, 5 August 2015
Short description: | p@chr9:56730814..56730824, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:56730814..56730824, - |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 3.62e-30 | 3 |
brush border epithelial cell | 4.37e-15 | 6 |
gut absorptive cell | 4.37e-15 | 6 |
enterocyte | 4.37e-15 | 6 |
epithelial cell | 4.94e-14 | 25 |
defensive cell | 2.31e-13 | 7 |
columnar/cuboidal epithelial cell | 4.95e-13 | 7 |
intestinal epithelial cell | 2.78e-10 | 9 |
epithelial cell of alimentary canal | 2.78e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
mucosa | 3.51e-23 | 15 |
gut-associated lymphoid tissue | 3.13e-20 | 2 |
mucosa-associated lymphoid tissue | 3.13e-20 | 2 |
lymphoid tissue | 3.13e-20 | 2 |
organ component layer | 1.61e-14 | 24 |
lymphoid system | 7.72e-14 | 3 |
intestinal mucosa | 2.46e-12 | 13 |
wall of intestine | 2.46e-12 | 13 |
gastrointestinal system mucosa | 2.46e-12 | 13 |
egg chamber | 4.58e-11 | 1 |
epithelium of mucosa | 2.78e-10 | 9 |
gastrointestinal system epithelium | 2.78e-10 | 9 |
intestinal epithelium | 2.78e-10 | 9 |
simple columnar epithelium | 1.59e-08 | 11 |