FFCP PHASE1:Mm9::chr9:41950222..41950233,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:41950222..41950233,+|id=chr9:41950222..41950233,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000553,1.61e-10,6;CL:0000556,1.61e-10,6;CL:0000355,1.61e-07,9;CL:0000050,3.42e-07,9|ontology_enrichment_disease=DOID:0060100!2.53e-08!3;DOID:4045!2.53e-08!3|ontology_enrichment_disease_v019_2=DOID:0060100,2.08e-21,3;DOID:4045,2.08e-21,3;DOID:0050686,5.11e-11,6|ontology_enrichment_uberon=UBERON:0007823!5.96e-08!5|ontology_enrichment_uberon_v019_2=UBERON:0002204,6.96e-10,32;UBERON:0000029,5.62e-08,1;UBERON:0001097,5.62e-08,1;UBERON:0003968,5.62e-08,1;UBERON:0001467,5.62e-08,1;UBERON:0001134,1.61e-07,9;UBERON:0002036,1.61e-07,9;UBERON:0002385,1.61e-07,9;UBERON:0000486,1.61e-07,9;UBERON:0007503,1.61e-07,9;UBERON:0001015,1.61e-07,9;UBERON:0002329,1.61e-07,9;UBERON:0003082,1.61e-07,9;UBERON:0003059,1.61e-07,9;UBERON:0007282,1.61e-07,9;UBERON:0004290,1.61e-07,9;UBERON:0009618,1.61e-07,9;UBERON:0000383,8.12e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,1.73504190947031,1.09691546884591,2.97072756258621,0,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,6.69650609179052,3.906676722619,5.75876118371178,41.764435650202,22.5405010036287,19.4204141212461,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.58937883647172,0,0,0,0,0,0,0,0,0.144599356919912,2.65383165584962,0,0.883366073841574,0.969750506270444,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0.287696137450811,0,0.274561413188081,1.43768206527355,0,0.312037673114561,0,0.179397413521912,0,0.739012760666419,0,0,0,0,0,0,0.390267295715598,0,0,0,0.163863314715738,0.518054945597687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,1.11116716421827,0,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p@chr9:41950222..41950233,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr9:41950222..41950233,+ | |||
|description=CAGE_peak_at_chr9:41950222..41950233,+ | |||
|id=chr9:41950222..41950233,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.61e-10,6;CL:0000556,1.61e-10,6;CL:0000355,1.61e-07,9;CL:0000050,3.42e-07,9 | |||
|ontology_enrichment_disease=DOID:0060100!2.53e-08!3;DOID:4045!2.53e-08!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.08e-21,3;DOID:4045,2.08e-21,3;DOID:0050686,5.11e-11,6 | |||
|ontology_enrichment_uberon=UBERON:0007823!5.96e-08!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,6.96e-10,32;UBERON:0000029,5.62e-08,1;UBERON:0001097,5.62e-08,1;UBERON:0003968,5.62e-08,1;UBERON:0001467,5.62e-08,1;UBERON:0001134,1.61e-07,9;UBERON:0002036,1.61e-07,9;UBERON:0002385,1.61e-07,9;UBERON:0000486,1.61e-07,9;UBERON:0007503,1.61e-07,9;UBERON:0001015,1.61e-07,9;UBERON:0002329,1.61e-07,9;UBERON:0003082,1.61e-07,9;UBERON:0003059,1.61e-07,9;UBERON:0007282,1.61e-07,9;UBERON:0004290,1.61e-07,9;UBERON:0009618,1.61e-07,9;UBERON:0000383,8.12e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,1.73504190947031,1.09691546884591,2.97072756258621,0,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,6.69650609179052,3.906676722619,5.75876118371178,41.764435650202,22.5405010036287,19.4204141212461,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.58937883647172,0,0,0,0,0,0,0,0,0.144599356919912,2.65383165584962,0,0.883366073841574,0.969750506270444,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0.287696137450811,0,0.274561413188081,1.43768206527355,0,0.312037673114561,0,0.179397413521912,0,0.739012760666419,0,0,0,0,0,0,0.390267295715598,0,0,0,0.163863314715738,0.518054945597687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,1.11116716421827,0,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr9:41950222..41950233,+ | |||
}} |
Latest revision as of 02:48, 5 August 2015
Short description: | p@chr9:41950222..41950233, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:41950222..41950233, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.61e-10 | 6 |
megakaryocyte | 1.61e-10 | 6 |
multi-potent skeletal muscle stem cell | 1.61e-07 | 9 |
megakaryocyte-erythroid progenitor cell | 3.42e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 6.96e-10 | 32 |
lymph node | 5.62e-08 | 1 |
axillary lymph node | 5.62e-08 | 1 |
peripheral lymph node | 5.62e-08 | 1 |
shoulder | 5.62e-08 | 1 |
skeletal muscle tissue | 1.61e-07 | 9 |
striated muscle tissue | 1.61e-07 | 9 |
muscle tissue | 1.61e-07 | 9 |
multilaminar epithelium | 1.61e-07 | 9 |
epithelial vesicle | 1.61e-07 | 9 |
musculature | 1.61e-07 | 9 |
somite | 1.61e-07 | 9 |
myotome | 1.61e-07 | 9 |
presomitic mesoderm | 1.61e-07 | 9 |
presumptive segmental plate | 1.61e-07 | 9 |
dermomyotome | 1.61e-07 | 9 |
trunk paraxial mesoderm | 1.61e-07 | 9 |
musculature of body | 8.12e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.08e-21 | 3 |
muscle cancer | 2.08e-21 | 3 |
organ system cancer | 5.11e-11 | 6 |