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FFCP PHASE1:Mm9::chr9:37209578..37209642,+: Difference between revisions

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{{FFCP|EntrezGene=74144|HGNC=|MCL_coexpression_id=181|UniProt=Q8C310,D3Z4M4,Q6IR38|association_with_transcript=0bp_to_ENSMUST00000063237,ENSMUST00000102895,ENSMUST00000115046,ENSMUST00000163262,ENSMUST00000172374,NM_028783,uc009ous.1,uc009out.1,uc009ouu.1,uc009ouv.1,uc012gqy.1_5end|description=CAGE_peak_1_at_Robo4_5end|id=chr9:37209578..37209642,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005177!1.24e-12!85;UBERON:0009569!2.41e-10!66;UBERON:0002048!9.18e-09!14;UBERON:0000117!9.18e-09!14;UBERON:0000171!9.18e-09!14;UBERON:0000170!9.18e-09!14;UBERON:0005597!9.18e-09!14;UBERON:0000118!9.18e-09!14;UBERON:0005153!4.96e-08!17;UBERON:0002100!1.54e-07!98;UBERON:0005157!1.60e-07!27;UBERON:0000466!4.10e-07!79|ontology_enrichment_uberon_v019_2=UBERON:0005177,3.75e-14,79;UBERON:0009569,1.31e-10,66;UBERON:0002100,3.23e-09,90;UBERON:0002048,7.89e-09,14;UBERON:0000117,7.89e-09,14;UBERON:0000171,7.89e-09,14;UBERON:0000170,7.89e-09,14;UBERON:0005597,7.89e-09,14;UBERON:0000118,7.89e-09,14;UBERON:0005153,4.32e-08,17|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33243904726265,0.809901069559304,0,0,0.137114433605739,0,8.58937230525805,0,0,0,0,0,0,0,0,0.756090389279792,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28629718017973,2.57880095944881,0.515672092277442,1.01158230429799,2.11596391708813,2.53532561402472,0,0,0,0,0.7104801149461,0,0,1.97010263386108,2.02508907497536,2.3135745748652,3.99911378165325,3.09215957332259,2.20483438586917,2.20444583341944,0.919218786610021,4.40463523997555,2.93680877595932,2.76491759861238,1.58263545276233,2.37867873366265,2.08365348222704,3.07101298901519,2.25105044012672,3.36156145108982,2.65165726926301,3.55929201997757,2.98239113320481,0.757261933331841,0.755715601067855,201.455819647666,42.1607699720879,0,0,7.14754059192436,2.68816132258401,4.77511028447956,0,0,0,0.281686839553361,0,0,0,0,0,0,5.36664234679582,10.3575153458869,9.79718117827843,8.67426633830679,15.8322048722313,13.1450833435953,10.399862198131,12.8171690777918,14.2003248202533,8.40462890296871,14.6045350489111,0.884610551949874,14.3972496453194,6.18356251689102,4.84875253135222,1.86391761218122,2.34224637609238,3.56059401582874,4.34276993854605,4.91242010474273,5.39912457894067,2.54140454146129,3.89455662452539,2.74500361691176,2.76439574648302,2.08589184230732,3.83573185995496,3.1168206683934,2.43361894601636,13.1372779366908,9.33052279575698,1.0108910337347,3.36706969418358,3.90361328888111,3.21862946206862,2.70093194708024,3.61691562805716,4.83059143974428,3.33095672740609,2.71735001223214,5.69147415625834,3.01795190105979,3.9712276835242,5.45448484908241,7.01426343768239,7.22922847986555,8.70630416305416,10.0833246839892,5.7719937377363,0.702213187313235,0.257347907114715,0.284163499395593,2.07125772535502,3.28336483973535,3.6012412292203,10.4167683657493,8.06733350164356,9.56456099901745,10.2314935690179,13.6819434713806,15.2962598500992,9.2153515951549,20.685100473966,25.4556061973987,24.5615978874558,19.9790604914856,24.6939810519084,1.89260953707715,3.08713837137853,0,2.3800550999719,6.39864751605702,8.36052018697579,6.31450560478257,8.0673409849337,10.4517680607089,7.60902504450237,8.0669940462567,8.56434564564857,8.04272668160862,11.3405189063456,7.21367122340745,5.39291645192533,7.13255564586491,6.37252074413975,8.15571974098251,9.02563249616858,14.6520056375005,9.16430975303914,10.4734343070518,16.8325967736765,18.4018323031589,17.5656076095727,12.55989822731,15.3012483263033,7.41131567717872,4.67166296005063,4.91397487783007,2.69834534861824,4.46292267054706,2.41177159752417,4.58326533206556,5.75392274901621,10.5387897403773,5.49122826376163,8.62609239164127,15.2577788544086,9.67316786655138,9.85057623993736,8.25228102200796,9.16642690590398,30.4842763774898,5.49525094134406,14.9927778326664,10.6939404038369,12.9079636558676,16.9181320016234,27.8511059836636,28.8797798829542,22.3841904630791,27.9045508957456,29.8180417389501,29.1676700194014,29.5291318990681,33.9925287666552,0,0,7.86822836830458,9.65778612066564,4.17431533968259,3.6335622843583,0,18.935319540328,0,0,0,0,0,0,0,0,0,4.4984984299053,7.52282451603824,10.8620018237026,15.6371480979433,6.76377504187395,2.65490276679926,11.4106898992841,5.13950046840077,9.9960692270626,15.3556984298002,15.3717573971964,18.6068371081119,12.7236805317127,12.83390562185,7.58488219045958,14.7586052004998,10.3135543248187,6.80879211507576,4.86164953884538,5.95049945400671,8.14480733120051,8.6896714484714,9.0968096977056,10.6956863391379,17.0500371504176,2.58138878870081,7.62595455109753,1.54369878638473,4.28704257647848,11.1410454420175,5.97097956788743,5.37175548014114,5.41664969158702,6.70405924248657,2.59595422814714,1.87957968877638,13.2087595496462,7.59297562215818,3.20226376907975,1.0935538217682,2.28778173206523,24.3069154891213,31.3491253204994,23.2175955991432,2.86401185404534,5.21954389408873,9.96265388921559,7.77638453916969,5.43629569637619,6.76923947613151,7.68726774393478,7.76942483818158,7.85267825952089,4.53652406521275,2.4853572523477,0,5.83114529571517,3.80554528051325,6.61134040369762,8.78286799648571,7.7719817725758,9.15386461436881,2.73429208172295,1.8874681996628,1.20792060413003,3.16833006883652,0.948033361884535,6.48720688928525,3.59488350076895,4.15746633528944,2.68540043501222,1.98681354781265,1.44234539423963,1.18151621739662,1.61546319917036,1.447929326445,1.51239277705261,0.584747284438515,0.673482891482306,1.05189211963412,8.61575457737803,3.32978930061097,3.22969883794113,1.17519231454855,6.95482538515886,10.5102186252662,8.05867146775966,3.42989406526505,4.01257683228291,3.3885110557024,1.84130094602871,4.01026859407578,2.23409137046794,0.685082519770642,1.5107877947794,1.35004500046361,0.900642406448441,1.35942722695261,0,0.726511433089237,4.38927360741134,3.92687293234509,6.07766792670735,1.25767897576789,3.30918315210025,11.3345831178824,10.3017528619447,8.98573786857083,10.3605856823157,10.1391719956096,8.86543804514558,10.6751318515666,10.6922004516132,9.82146519140987,8.09699275181225,11.240779616651,9.83837024364896,12.3625770240992,10.5983222496766,8.57173130963539,10.6485483695602,10.9680647375768,9.59286349773368,10.257922465271,6.68455402344244,9.51225458938417,8.94437018888666,10.0495044245938,13.4674145197857,9.96534152243063,8.96390789617628,7.36615877705441,9.14127362997199,8.10207766120794,7.99393849401427,10.7608539884888,11.3881658645598,19.1288332068843,10.1472052794977,15.7670128221887|short_description=p1@Robo4}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=74144
|HGNC=
|MCL_coexpression_id=181
|TSSclassifier=NA
|UniProt=Q8C310,D3Z4M4,Q6IR38
|association_with_transcript=0bp_to_ENSMUST00000063237,ENSMUST00000102895,ENSMUST00000115046,ENSMUST00000163262,ENSMUST00000172374,NM_028783,uc009ous.1,uc009out.1,uc009ouu.1,uc009ouv.1,uc012gqy.1_5end
|cluster_id=chr9:37209578..37209642,+
|description=CAGE_peak_1_at_Robo4_5end
|id=chr9:37209578..37209642,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005177!1.24e-12!85;UBERON:0009569!2.41e-10!66;UBERON:0002048!9.18e-09!14;UBERON:0000117!9.18e-09!14;UBERON:0000171!9.18e-09!14;UBERON:0000170!9.18e-09!14;UBERON:0005597!9.18e-09!14;UBERON:0000118!9.18e-09!14;UBERON:0005153!4.96e-08!17;UBERON:0002100!1.54e-07!98;UBERON:0005157!1.60e-07!27;UBERON:0000466!4.10e-07!79
|ontology_enrichment_uberon_v019_2=UBERON:0005177,3.75e-14,79;UBERON:0009569,1.31e-10,66;UBERON:0002100,3.23e-09,90;UBERON:0002048,7.89e-09,14;UBERON:0000117,7.89e-09,14;UBERON:0000171,7.89e-09,14;UBERON:0000170,7.89e-09,14;UBERON:0005597,7.89e-09,14;UBERON:0000118,7.89e-09,14;UBERON:0005153,4.32e-08,17
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33243904726265,0.809901069559304,0,0,0.137114433605739,0,8.58937230525805,0,0,0,0,0,0,0,0,0.756090389279792,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28629718017973,2.57880095944881,0.515672092277442,1.01158230429799,2.11596391708813,2.53532561402472,0,0,0,0,0.7104801149461,0,0,1.97010263386108,2.02508907497536,2.3135745748652,3.99911378165325,3.09215957332259,2.20483438586917,2.20444583341944,0.919218786610021,4.40463523997555,2.93680877595932,2.76491759861238,1.58263545276233,2.37867873366265,2.08365348222704,3.07101298901519,2.25105044012672,3.36156145108982,2.65165726926301,3.55929201997757,2.98239113320481,0.757261933331841,0.755715601067855,201.455819647666,42.1607699720879,0,0,7.14754059192436,2.68816132258401,4.77511028447956,0,0,0,0.281686839553361,0,0,0,0,0,0,5.36664234679582,10.3575153458869,9.79718117827843,8.67426633830679,15.8322048722313,13.1450833435953,10.399862198131,12.8171690777918,14.2003248202533,8.40462890296871,14.6045350489111,0.884610551949874,14.3972496453194,6.18356251689102,4.84875253135222,1.86391761218122,2.34224637609238,3.56059401582874,4.34276993854605,4.91242010474273,5.39912457894067,2.54140454146129,3.89455662452539,2.74500361691176,2.76439574648302,2.08589184230732,3.83573185995496,3.1168206683934,2.43361894601636,13.1372779366908,9.33052279575698,1.0108910337347,3.36706969418358,3.90361328888111,3.21862946206862,2.70093194708024,3.61691562805716,4.83059143974428,3.33095672740609,2.71735001223214,5.69147415625834,3.01795190105979,3.9712276835242,5.45448484908241,7.01426343768239,7.22922847986555,8.70630416305416,10.0833246839892,5.7719937377363,0.702213187313235,0.257347907114715,0.284163499395593,2.07125772535502,3.28336483973535,3.6012412292203,10.4167683657493,8.06733350164356,9.56456099901745,10.2314935690179,13.6819434713806,15.2962598500992,9.2153515951549,20.685100473966,25.4556061973987,24.5615978874558,19.9790604914856,24.6939810519084,1.89260953707715,3.08713837137853,0,2.3800550999719,6.39864751605702,8.36052018697579,6.31450560478257,8.0673409849337,10.4517680607089,7.60902504450237,8.0669940462567,8.56434564564857,8.04272668160862,11.3405189063456,7.21367122340745,5.39291645192533,7.13255564586491,6.37252074413975,8.15571974098251,9.02563249616858,14.6520056375005,9.16430975303914,10.4734343070518,16.8325967736765,18.4018323031589,17.5656076095727,12.55989822731,15.3012483263033,7.41131567717872,4.67166296005063,4.91397487783007,2.69834534861824,4.46292267054706,2.41177159752417,4.58326533206556,5.75392274901621,10.5387897403773,5.49122826376163,8.62609239164127,15.2577788544086,9.67316786655138,9.85057623993736,8.25228102200796,9.16642690590398,30.4842763774898,5.49525094134406,14.9927778326664,10.6939404038369,12.9079636558676,16.9181320016234,27.8511059836636,28.8797798829542,22.3841904630791,27.9045508957456,29.8180417389501,29.1676700194014,29.5291318990681,33.9925287666552,0,0,7.86822836830458,9.65778612066564,4.17431533968259,3.6335622843583,0,18.935319540328,0,0,0,0,0,0,0,0,0,4.4984984299053,7.52282451603824,10.8620018237026,15.6371480979433,6.76377504187395,2.65490276679926,11.4106898992841,5.13950046840077,9.9960692270626,15.3556984298002,15.3717573971964,18.6068371081119,12.7236805317127,12.83390562185,7.58488219045958,14.7586052004998,10.3135543248187,6.80879211507576,4.86164953884538,5.95049945400671,8.14480733120051,8.6896714484714,9.0968096977056,10.6956863391379,17.0500371504176,2.58138878870081,7.62595455109753,1.54369878638473,4.28704257647848,11.1410454420175,5.97097956788743,5.37175548014114,5.41664969158702,6.70405924248657,2.59595422814714,1.87957968877638,13.2087595496462,7.59297562215818,3.20226376907975,1.0935538217682,2.28778173206523,24.3069154891213,31.3491253204994,23.2175955991432,2.86401185404534,5.21954389408873,9.96265388921559,7.77638453916969,5.43629569637619,6.76923947613151,7.68726774393478,7.76942483818158,7.85267825952089,4.53652406521275,2.4853572523477,0,5.83114529571517,3.80554528051325,6.61134040369762,8.78286799648571,7.7719817725758,9.15386461436881,2.73429208172295,1.8874681996628,1.20792060413003,3.16833006883652,0.948033361884535,6.48720688928525,3.59488350076895,4.15746633528944,2.68540043501222,1.98681354781265,1.44234539423963,1.18151621739662,1.61546319917036,1.447929326445,1.51239277705261,0.584747284438515,0.673482891482306,1.05189211963412,8.61575457737803,3.32978930061097,3.22969883794113,1.17519231454855,6.95482538515886,10.5102186252662,8.05867146775966,3.42989406526505,4.01257683228291,3.3885110557024,1.84130094602871,4.01026859407578,2.23409137046794,0.685082519770642,1.5107877947794,1.35004500046361,0.900642406448441,1.35942722695261,0,0.726511433089237,4.38927360741134,3.92687293234509,6.07766792670735,1.25767897576789,3.30918315210025,11.3345831178824,10.3017528619447,8.98573786857083,10.3605856823157,10.1391719956096,8.86543804514558,10.6751318515666,10.6922004516132,9.82146519140987,8.09699275181225,11.240779616651,9.83837024364896,12.3625770240992,10.5983222496766,8.57173130963539,10.6485483695602,10.9680647375768,9.59286349773368,10.257922465271,6.68455402344244,9.51225458938417,8.94437018888666,10.0495044245938,13.4674145197857,9.96534152243063,8.96390789617628,7.36615877705441,9.14127362997199,8.10207766120794,7.99393849401427,10.7608539884888,11.3881658645598,19.1288332068843,10.1472052794977,15.7670128221887
|short_description=p1@Robo4
}}

Latest revision as of 14:43, 26 September 2015

Short description:p1@Robo4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Robo4_5end
Coexpression cluster:MCL_coexpression_mm9:181
Association with transcript: 0bp_to_ENSMUST00000063237, ENSMUST00000102895, ENSMUST00000115046, ENSMUST00000163262, ENSMUST00000172374, NM_028783, uc009ous.1, uc009out.1, uc009ouu.1, uc009ouv.1, uc012gqy.1_5end
EntrezGene:Robo4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Robo4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.59
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.97
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.03
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.20
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.20
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.94
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.38
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.07
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.98
Mouse Schwann, donor1.CNhs12507.11728-123D90.76
Mouse Schwann, donor2.CNhs12573.11746-123F90.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3201.46
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F742.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F47.15
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.69
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.37
accessory axillary lymph node, adult.CNhs10475.1063-29H910.36
adrenal gland, adult.CNhs10508.49-24D79.80
adrenal gland, embryo E14.CNhs11038.406-44C58.67
adrenal gland, embryo E16.CNhs11004.1254-43D615.83
adrenal gland, embryo E17.CNhs11043.1263-45I113.15
adrenal gland, embryo E18.CNhs11026.1262-18F510.40
adrenal gland, neonate N00.CNhs11191.1311-23C112.82
adrenal gland, neonate N25.CNhs11223.1377-27I314.20
amnion, adult pregnant day17.5.CNhs10488.583-22A88.40
aorta, adult.CNhs10498.46-23H114.60
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F514.40
bone (os femoris), neonate N16.CNhs11225.1525-43A66.18
bone (os femoris), neonate N20.CNhs11195.1350-25C34.85
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I23.56
colon, adult.CNhs10468.36-18H74.34
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.91
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D15.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.54
corpora quadrigemina, adult.CNhs10501.16-22A43.89
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F12.76
cortex, adult.CNhs10473.12-14D52.09
cortex, neonate N30.CNhs11107.1392-42F23.84
diencephalon, adult.CNhs10482.20-12F23.12
diencephalon, neonate N30.CNhs11201.1388-42B22.43
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B113.14
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.33
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G43.37
eyeball, embryo E12.CNhs11016.345-16C63.90
eyeball, embryo E14.CNhs10521.399-16E23.22
eyeball, embryo E15.CNhs10593.426-16C92.70
eyeball, embryo E17.CNhs11023.1261-18D43.62
eyeball, neonate N00.CNhs11207.633-15C64.83
eyeball, neonate N01.CNhs11140.1532-43E73.33
eyeball, neonate N02.CNhs11205.1551-44G82.72
eyeball, neonate N16.CNhs11188.777-19A25.69
forelimb, embryo E11.CNhs10596.335-25E23.02
forelimb, embryo E12.CNhs10600.359-14H23.97
forelimb, embryo E13.CNhs10589.384-1E25.45
forelimb, embryo E14.CNhs10577.413-26A87.01
forelimb, embryo E15.CNhs11007.437-20E77.23
forelimb, embryo E17.CNhs10598.1517-43C48.71
forelimb, embryo E18.CNhs11008.1520-43B510.08
gonad, embryo E13.CNhs11044.1564-45I65.77
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E92.07
heart, embryo E12.CNhs11015.353-12F53.28
heart, embryo E13.CNhs11013.376-3I93.60
heart, embryo E14.CNhs10597.403-26D410.42
heart, embryo E15.CNhs11017.431-16C88.07
heart, embryo E16.CNhs11021.457-17C69.56
heart, embryo E17.CNhs11025.479-18E510.23
heart, embryo E18.CNhs11030.1283-20G313.68
heart, neonate N00.CNhs11213.639-21E315.30
heart, neonate N03.CNhs11221.1349-25I29.22
heart, neonate N10.CNhs11118.749-24G120.69
heart, neonate N16.CNhs11209.782-15G125.46
heart, neonate N20.CNhs11127.821-26I624.56
heart, neonate N25.CNhs11196.1351-25D319.98
heart, neonate N30.CNhs11202.1390-42D224.69
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G13.09
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A32.38
intestine, embryo E12.CNhs11019.1251-16I56.40
intestine, embryo E13.CNhs11010.381-16D58.36
intestine, embryo E15.CNhs10602.976-16D86.31
intestine, embryo E16.CNhs10585.463-22H48.07
intestine, embryo E17.CNhs10582.482-18D310.45
intestine, embryo E18.CNhs10526.1289-20F77.61
intestine, neonate N00.CNhs11126.644-26D18.07
intestine, neonate N01.CNhs11192.1322-23E98.56
intestine, neonate N06.CNhs11102.688-20B88.04
intestine, neonate N07.CNhs11095.720-20F211.34
intestine, neonate N10.CNhs11098.755-23A57.21
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E37.13
intestine, neonate N30.CNhs11131.1384-42G16.37
kidney, embryo E14.CNhs10606.411-4I98.16
kidney, embryo E15.CNhs10997.434-16F89.03
kidney, embryo E16.CNhs10584.464-22A514.65
kidney, embryo E17.CNhs11028.483-18I29.16
kidney, embryo E18.CNhs11001.1288-20C710.47
kidney, neonate N00.CNhs11214.646-21G716.83
kidney, neonate N10.CNhs11206.758-6D518.40
kidney, neonate N20.CNhs11113.832-19I117.57
kidney, neonate N25.CNhs11122.1353-25F312.56
kidney, neonate N30.CNhs11203.1385-42H115.30
liver, adult pregnant day01.CNhs10466.508-5B27.41
liver, embryo E12.CNhs10601.355-15F84.67
liver, embryo E13.CNhs10524.378-3H64.91
liver, embryo E14.CNhs10594.409-16E12.70
liver, embryo E15.CNhs10520.433-16D74.46
liver, embryo E16.CNhs10523.462-17F52.41
liver, embryo E17.CNhs10510.481-18A34.58
liver, embryo E18.CNhs10579.499-43G45.75
liver, neonate N00.CNhs11117.641-24F410.54
liver, neonate N03.CNhs11123.1345-25G25.49
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H215.26
liver, neonate N10.CNhs11115.751-24B99.67
liver, neonate N20.CNhs11220.823-25A39.85
liver, neonate N25.CNhs11198.1368-26H18.25
liver, neonate N30.CNhs11106.1382-42D19.17
lung, adult.CNhs10474.28-22B130.48
lung, embryo E12.CNhs10522.354-16G25.50
lung, embryo E14.CNhs10604.404-26F814.99
lung, embryo E15.CNhs11020.432-17C510.69
lung, embryo E16.CNhs10998.458-17B612.91
lung, embryo E17.CNhs10605.480-44A616.92
lung, embryo E18.CNhs10583.1287-20I627.85
lung, neonate N00.CNhs11224.640-42C628.88
lung, neonate N06.CNhs11212.683-20E522.38
lung, neonate N07.CNhs11111.715-19A327.90
lung, neonate N10.CNhs11219.750-23E629.82
lung, neonate N20.CNhs11109.822-18A429.17
lung, neonate N25.CNhs11119.1359-25C729.53
lung, neonate N30.CNhs11133.1394-42H233.99
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B67.87
mammary gland, adult pregnant day19.CNhs10476.588-5H29.66
medulla oblongata, adult.CNhs10477.17-12C24.17
medulla oblongata, neonate N30.CNhs11200.1396-42A33.63
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C218.94
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I94.50
ovary, adult.CNhs10507.91-2I77.52
ovary, embryo E18.CNhs11040.505-44H710.86
ovary, neonate N00.CNhs11217.1299-22I415.64
oviduct, adult pregnant day01.CNhs10500.988-6G66.76
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F411.41
pancreas, embryo E15.CNhs11042.1556-45F25.14
pancreas, embryo E16.CNhs11003.460-26E510.00
pancreas, embryo E17.CNhs10599.1558-45G315.36
pancreas, embryo E18.CNhs10580.1535-43I715.37
pancreas, neonate N00.CNhs11105.645-26G918.61
pancreas, neonate N01.CNhs11138.1531-43D712.72
pancreas, neonate N02.CNhs11139.1539-43D812.83
pancreas, neonate N16.CNhs11136.787-43B67.58
pancreas, neonate N25.CNhs11094.1555-45E214.76
pancreas, neonate N30.CNhs11182.1548-44H510.31
pituitary gland, adult.CNhs10493.21-1G86.81
pituitary gland, embryo E12.CNhs11018.346-16E64.86
pituitary gland, embryo E13.CNhs11009.370-44C75.95
pituitary gland, embryo E14.CNhs11037.398-44A58.14
pituitary gland, embryo E15.CNhs10592.427-16B98.69
pituitary gland, embryo E16.CNhs11036.449-43F69.10
pituitary gland, embryo E17.CNhs11039.1265-44F510.70
pituitary gland, neonate N00.CNhs11190.1308-22E917.05
placenta, adult pregnant day10.CNhs10472.539-13I72.58
placenta, adult pregnant day17.CNhs10464.577-18G37.63
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C34.29
skin, neonate N00.CNhs11124.650-25G411.14
skin, neonate N03.CNhs11215.662-22H35.97
skin, neonate N06.CNhs11097.693-20I55.37
skin, neonate N10.CNhs11108.762-6C45.42
small intestine, neonate N16.CNhs11114.790-21I16.70
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G21.88
spleen, embryo E16.CNhs11035.461-43C113.21
spleen, embryo E18.CNhs11011.1271-21F27.59
spleen, neonate N10.CNhs11116.752-24D13.20
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G32.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C624.31
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C931.35
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D323.22
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E35.22
stomach, embryo E15.CNhs10603.1252-16G89.96
stomach, embryo E16.CNhs11022.459-17D47.78
stomach, embryo E17.CNhs11006.1035-18D55.44
stomach, embryo E18.CNhs10999.1286-20C66.77
stomach, neonate N03.CNhs11193.1340-24B87.69
stomach, neonate N07.CNhs11210.718-18A97.77
stomach, neonate N25.CNhs11104.1355-25E47.85
stomach, neonate N30.CNhs11134.1386-42I14.54
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F55.83
testis, embryo E15.CNhs11034.443-27C53.81
testis, embryo E16.CNhs11033.470-26G56.61
testis, embryo E17.CNhs11029.486-18I58.78
testis, embryo E18.CNhs11027.503-18G57.77
testis, neonate N00.CNhs11189.1300-22B79.15
testis, neonate N07.CNhs11222.726-26I42.73
testis, neonate N10.CNhs11204.763-44D91.89
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E23.17
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I46.49
thymus, embryo E15.CNhs11005.430-45I23.59
thymus, embryo E16.CNhs11002.456-26C54.16
thymus, embryo E17.CNhs10581.478-18C12.69
thymus, embryo E18.CNhs10595.1273-19G41.99
thymus, neonate N02.CNhs11181.1541-43F81.44
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C41.62
thymus, neonate N07.CNhs11211.713-19D31.45
thymus, neonate N10.CNhs11194.748-24E41.51
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.67
thymus, neonate N30.CNhs11132.1393-42G21.05
tongue, adult.CNhs10499.32-1B48.62
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.23
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E46.95
uterus, adult pregnant day19.CNhs10497.590-15F510.51
uterus, adult.CNhs10509.92-27E58.06
vagina, adult.CNhs10502.89-27D53.43
vesicular gland, adult.CNhs10491.51-27F84.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C94.39
whole body, embryo E13.CNhs10512.372-23H23.93
whole body, embryo E14.5.CNhs10578.420-27D26.08
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F23.31
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G511.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G510.30
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.99
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.36
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G510.14
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.68
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G510.69
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.82
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G511.24
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G59.84
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G512.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G510.60
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.57
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G510.65
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.97
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.59
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.26
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G59.51
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.94
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G510.05
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G513.47
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G59.97
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.96
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G57.37
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G59.14
whole body, embryo E17.5.CNhs10513.490-9F98.10
whole body, embryo E17.CNhs10517.475-3I57.99
whole body, embryo E18.CNhs10516.493-3B310.76
whole body, neonate N00.CNhs10525.657-19C211.39
whole body, neonate N01.CNhs10576.659-23C619.13
whole body, neonate N06.CNhs10515.692-21D110.15
whole body, neonate N10.CNhs10518.761-6B415.77





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
trunk region element3.75e-1479
subdivision of trunk1.31e-1066
trunk3.23e-0990
lung7.89e-0914
respiratory tube7.89e-0914
respiration organ7.89e-0914
pair of lungs7.89e-0914
lung primordium7.89e-0914
lung bud7.89e-0914
epithelial bud4.32e-0817
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